Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358590

Identifier: 78358590

GI number: 78358590

Start: 3511620

End: 3512423

Strand: Direct

Name: 78358590

Synonym: Dde_3551

Alternate gene names: NA

Gene position: 3511620-3512423 (Clockwise)

Preceding gene: 78358589

Following gene: 78358591

Centisome position: 94.14

GC content: 62.56

Gene sequence:

>804_bases
ATGGCCGCGCATGTCCGGCATCAGGCCGTCCCCGTGTCCGGCCTACGGCAACGGAGAACGCAGTTGTCCCGCAGATACGC
TGTATACATGATTCCGCCGCACGGCAGCCCGCTGGAAGAATTCGGCCGCCGCTGGCTGGGCCGGACGCCTTCCGCGGTAC
CCGACACAATGCCCTCCCATCCGGCACTGCGGGATTCATTCTGCGGGCAGAAAACAGAAAACCTGCTTGCCGGAACACGC
CGGCGCGGGTTCCACGCCACCATACGGGCCCCGTTTGAGGCTGCACCGCGCATCACACCGGCGCAGCTTTCCGCCGCACT
GGAAGAATTCTGCACAACACAGCCGCCGGTCTGCGGCCCGCCGCTGCGGCTGGCCTGTCTGGGAGCACAGGTGGCACTGG
TGCCGGAACGCCCCTGCAAAGCCATCAGCAGACTGGCCGATGCCTGCCTGCGTTTTTTTGAACCGCTGCGTGCACCGCTC
TGCCCCGCAGACATGGAACGTCACCGCATGAAGCCTCTCACAGAAAGACAGGAAAGATTGCTGATGCGCTTCGGCTATCC
TTTTGTGCTTGAAGATTACCGCTTTTACATGGCCCTCACGGACAGAATCCGCGACACCGCATGCAGACGCGCACTGTGCG
AAAAACTGGCGCCCCTCGTCGCTCCTTTTCTGCCCGGCGCACTGCACATCGGCGAACTGTGCCTTTTCCGTCAGGAAAAC
CGTGTTTCTCCGTTCATATTGCAAAAACGCATTCCCCTTACCGGCCGGCAAAGCCCTGCGCGCAGACACCGGGCCCGCCT
GTAG

Upstream 100 bases:

>100_bases
CCCGTACCTTTCTGACGCGCAACAGGCACACCGCCGCCACATCTCCGTCACACGGCACAGGCACAACGGAACATCCCCCT
TTTGCACCGGAGGACGCCTG

Downstream 100 bases:

>100_bases
CCACGCCACCGCCCGTGCCGTTCTGATAACCGCGCCGTTCTGTTGAACCGCATGGCCGCCCGTGTTACGGTACCGACATC
CTGAAAAAGTGAACAGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase; Conserved Hypothethical Protein DUF

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MAAHVRHQAVPVSGLRQRRTQLSRRYAVYMIPPHGSPLEEFGRRWLGRTPSAVPDTMPSHPALRDSFCGQKTENLLAGTR
RRGFHATIRAPFEAAPRITPAQLSAALEEFCTTQPPVCGPPLRLACLGAQVALVPERPCKAISRLADACLRFFEPLRAPL
CPADMERHRMKPLTERQERLLMRFGYPFVLEDYRFYMALTDRIRDTACRRALCEKLAPLVAPFLPGALHIGELCLFRQEN
RVSPFILQKRIPLTGRQSPARRHRARL

Sequences:

>Translated_267_residues
MAAHVRHQAVPVSGLRQRRTQLSRRYAVYMIPPHGSPLEEFGRRWLGRTPSAVPDTMPSHPALRDSFCGQKTENLLAGTR
RRGFHATIRAPFEAAPRITPAQLSAALEEFCTTQPPVCGPPLRLACLGAQVALVPERPCKAISRLADACLRFFEPLRAPL
CPADMERHRMKPLTERQERLLMRFGYPFVLEDYRFYMALTDRIRDTACRRALCEKLAPLVAPFLPGALHIGELCLFRQEN
RVSPFILQKRIPLTGRQSPARRHRARL
>Mature_266_residues
AAHVRHQAVPVSGLRQRRTQLSRRYAVYMIPPHGSPLEEFGRRWLGRTPSAVPDTMPSHPALRDSFCGQKTENLLAGTRR
RGFHATIRAPFEAAPRITPAQLSAALEEFCTTQPPVCGPPLRLACLGAQVALVPERPCKAISRLADACLRFFEPLRAPLC
PADMERHRMKPLTERQERLLMRFGYPFVLEDYRFYMALTDRIRDTACRRALCEKLAPLVAPFLPGALHIGELCLFRQENR
VSPFILQKRIPLTGRQSPARRHRARL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30332; Mature: 30201

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAHVRHQAVPVSGLRQRRTQLSRRYAVYMIPPHGSPLEEFGRRWLGRTPSAVPDTMPSH
CCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PALRDSFCGQKTENLLAGTRRRGFHATIRAPFEAAPRITPAQLSAALEEFCTTQPPVCGP
CCHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
PLRLACLGAQVALVPERPCKAISRLADACLRFFEPLRAPLCPADMERHRMKPLTERQERL
CHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHH
LMRFGYPFVLEDYRFYMALTDRIRDTACRRALCEKLAPLVAPFLPGALHIGELCLFRQEN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
RVSPFILQKRIPLTGRQSPARRHRARL
CCCHHHHHHCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure 
AAHVRHQAVPVSGLRQRRTQLSRRYAVYMIPPHGSPLEEFGRRWLGRTPSAVPDTMPSH
CCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PALRDSFCGQKTENLLAGTRRRGFHATIRAPFEAAPRITPAQLSAALEEFCTTQPPVCGP
CCHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
PLRLACLGAQVALVPERPCKAISRLADACLRFFEPLRAPLCPADMERHRMKPLTERQERL
CHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHH
LMRFGYPFVLEDYRFYMALTDRIRDTACRRALCEKLAPLVAPFLPGALHIGELCLFRQEN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
RVSPFILQKRIPLTGRQSPARRHRARL
CCCHHHHHHCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA