| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is dhaT [H]
Identifier: 78358573
GI number: 78358573
Start: 3491618
End: 3492760
Strand: Direct
Name: dhaT [H]
Synonym: Dde_3534
Alternate gene names: 78358573
Gene position: 3491618-3492760 (Clockwise)
Preceding gene: 78358572
Following gene: 78358574
Centisome position: 93.6
GC content: 59.49
Gene sequence:
>1143_bases ATGTCGGTAACGAAGTTCGCTATTCCGGAAGTCATCTTCGGCAACTCCAGCCTGCGGTATCTTGCACAGTGTGCGCTGCG GCTCGGAGCAAGACGGATATTTCTGGTAAGTGATCCCGGGCTGGAAAAGGCGGGCTGGGTGCAGCACGTCATTGACATTC TTTCCGAAGACCGGCTGGAATGCGTCTATTACAACGATGTGGATTCCAACCCCCGAGACTGGCAGGTGCACGAGGGCGCC CGTCTGTACACTGAAGAACGCGCCGATCTCATCATCGGTCTCGGCGGCGGCAGCCCCATTGACGCCGCCAAGGGCATTGC CACCATTGCCAGCAACGGCGGGCGGATTCATGATTACGAGGGCGCCAACCGCATCATGCGTCCCCTGCCGCCCATGATTT TCATCCCCACCACGGCGGGCAGCGGCTCTGACATTTCACAGTACTGTATTATCACCGACGTGGAGCGGCAGCTCAAAATG TCCATCATCAGCCGCTCGCTGGTGCCCAACGTCTCCATCATAGACCCTTCTCTTCTGCTCACAAAAACCGTGGAACTGAT TCTTGCTTCGGCCATAGACGCACTGGCCCACGCGGTTGAATCCTATGTATCACGGCTGGCTTCTCCGTTTACGGAGACGC AGGCGCTGTATGCCATCCGGCTGATCATGGAAAATCTGGAAACGGCAGCCCGCACGCGCAACCCCGCGGCACTGGAAAAG CTGAGCATCGCCAGTACCGCGGCGGGCATGTCTTTCAGCAATGCCGGGCTGGGCATAGGACATGCGCTGGCGCACTCGCT GGGCGGACGCTACGACGTGCTGCACGGGCTGGTGCATCCGGTACTGCTGCCGCACGTCATGCGGTACAACCTGCCTGTGT GCCGCGAAAAAATGGACAACATCGCCGCCGTGGTGCTGCAAAGCTGCGACACCGCCGGAACCGGCCGCGCACTGGAGGGC ATAGAACAGCTGGAACACATGTTCCGTTCGCTGCAGGTCACCACCAGACTGCGTGATATTCTGCCCGACGACAGTCAGCT GGAGCAGATATGCAAAATGGCGGTGCCGGACGAATGCGCACTTACCAACCCGCGCGAAGCCACCTGGGCTGACCTGATGG GGATATGCAAAGAGGCCTGGTAA
Upstream 100 bases:
>100_bases CCTGAAAAGCATAAGCAATTTTTGTTCACGGGCTTGCCCTAACGGGAGATAAGCGGGTATCAACAAGACTGATTTTCTTT ATACGCTCCGAGGAGGCGGC
Downstream 100 bases:
>100_bases TGAAAGGCAAAACAACCATAGAAGACCTTGTCGGCATTGAACACAGCAAGCTGAATTTTTTTCAGGAACTCCAGCAGAGC ATTGAGGAACTGAAAGAAAG
Product: alcohol dehydrogenase, iron-containing
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSVTKFAIPEVIFGNSSLRYLAQCALRLGARRIFLVSDPGLEKAGWVQHVIDILSEDRLECVYYNDVDSNPRDWQVHEGA RLYTEERADLIIGLGGGSPIDAAKGIATIASNGGRIHDYEGANRIMRPLPPMIFIPTTAGSGSDISQYCIITDVERQLKM SIISRSLVPNVSIIDPSLLLTKTVELILASAIDALAHAVESYVSRLASPFTETQALYAIRLIMENLETAARTRNPAALEK LSIASTAAGMSFSNAGLGIGHALAHSLGGRYDVLHGLVHPVLLPHVMRYNLPVCREKMDNIAAVVLQSCDTAGTGRALEG IEQLEHMFRSLQVTTRLRDILPDDSQLEQICKMAVPDECALTNPREATWADLMGICKEAW
Sequences:
>Translated_380_residues MSVTKFAIPEVIFGNSSLRYLAQCALRLGARRIFLVSDPGLEKAGWVQHVIDILSEDRLECVYYNDVDSNPRDWQVHEGA RLYTEERADLIIGLGGGSPIDAAKGIATIASNGGRIHDYEGANRIMRPLPPMIFIPTTAGSGSDISQYCIITDVERQLKM SIISRSLVPNVSIIDPSLLLTKTVELILASAIDALAHAVESYVSRLASPFTETQALYAIRLIMENLETAARTRNPAALEK LSIASTAAGMSFSNAGLGIGHALAHSLGGRYDVLHGLVHPVLLPHVMRYNLPVCREKMDNIAAVVLQSCDTAGTGRALEG IEQLEHMFRSLQVTTRLRDILPDDSQLEQICKMAVPDECALTNPREATWADLMGICKEAW >Mature_379_residues SVTKFAIPEVIFGNSSLRYLAQCALRLGARRIFLVSDPGLEKAGWVQHVIDILSEDRLECVYYNDVDSNPRDWQVHEGAR LYTEERADLIIGLGGGSPIDAAKGIATIASNGGRIHDYEGANRIMRPLPPMIFIPTTAGSGSDISQYCIITDVERQLKMS IISRSLVPNVSIIDPSLLLTKTVELILASAIDALAHAVESYVSRLASPFTETQALYAIRLIMENLETAARTRNPAALEKL SIASTAAGMSFSNAGLGIGHALAHSLGGRYDVLHGLVHPVLLPHVMRYNLPVCREKMDNIAAVVLQSCDTAGTGRALEGI EQLEHMFRSLQVTTRLRDILPDDSQLEQICKMAVPDECALTNPREATWADLMGICKEAW
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=310, Percent_Identity=27.4193548387097, Blast_Score=99, Evalue=8e-21, Organism=Escherichia coli, GI48994951, Length=386, Percent_Identity=37.8238341968912, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1789163, Length=375, Percent_Identity=32.2666666666667, Blast_Score=194, Evalue=8e-51, Organism=Escherichia coli, GI87082107, Length=383, Percent_Identity=30.5483028720627, Blast_Score=172, Evalue=4e-44, Organism=Escherichia coli, GI1787493, Length=386, Percent_Identity=29.5336787564767, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI1789386, Length=352, Percent_Identity=21.875, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17537053, Length=271, Percent_Identity=25.830258302583, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321181, Length=383, Percent_Identity=34.4647519582245, Blast_Score=226, Evalue=4e-60, Organism=Drosophila melanogaster, GI24657991, Length=388, Percent_Identity=23.1958762886598, Blast_Score=89, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 41489; Mature: 41358
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTKFAIPEVIFGNSSLRYLAQCALRLGARRIFLVSDPGLEKAGWVQHVIDILSEDRLE CCCCHHCCCHHEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEE CVYYNDVDSNPRDWQVHEGARLYTEERADLIIGLGGGSPIDAAKGIATIASNGGRIHDYE EEEECCCCCCCCCCEECCCCHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEECCC GANRIMRPLPPMIFIPTTAGSGSDISQYCIITDVERQLKMSIISRSLVPNVSIIDPSLLL CHHHHHHCCCCEEEEECCCCCCCCCHHEEEEHHHHHHHHHHHHHHHHCCCCEEECCHHHH TKTVELILASAIDALAHAVESYVSRLASPFTETQALYAIRLIMENLETAARTRNPAALEK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LSIASTAAGMSFSNAGLGIGHALAHSLGGRYDVLHGLVHPVLLPHVMRYNLPVCREKMDN HHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IAAVVLQSCDTAGTGRALEGIEQLEHMFRSLQVTTRLRDILPDDSQLEQICKMAVPDECA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC LTNPREATWADLMGICKEAW CCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SVTKFAIPEVIFGNSSLRYLAQCALRLGARRIFLVSDPGLEKAGWVQHVIDILSEDRLE CCCHHCCCHHEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEE CVYYNDVDSNPRDWQVHEGARLYTEERADLIIGLGGGSPIDAAKGIATIASNGGRIHDYE EEEECCCCCCCCCCEECCCCHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEECCC GANRIMRPLPPMIFIPTTAGSGSDISQYCIITDVERQLKMSIISRSLVPNVSIIDPSLLL CHHHHHHCCCCEEEEECCCCCCCCCHHEEEEHHHHHHHHHHHHHHHHCCCCEEECCHHHH TKTVELILASAIDALAHAVESYVSRLASPFTETQALYAIRLIMENLETAARTRNPAALEK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LSIASTAAGMSFSNAGLGIGHALAHSLGGRYDVLHGLVHPVLLPHVMRYNLPVCREKMDN HHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IAAVVLQSCDTAGTGRALEGIEQLEHMFRSLQVTTRLRDILPDDSQLEQICKMAVPDECA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC LTNPREATWADLMGICKEAW CCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]