Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358422

Identifier: 78358422

GI number: 78358422

Start: 3348397

End: 3350088

Strand: Direct

Name: 78358422

Synonym: Dde_3382

Alternate gene names: NA

Gene position: 3348397-3350088 (Clockwise)

Preceding gene: 78358421

Following gene: 78358423

Centisome position: 89.76

GC content: 61.35

Gene sequence:

>1692_bases
ATGGCCCGTAAGGATGTATTTGAATTTCTGGTGGACGGCACCAGCGGCCTTGTTCCCGGCGATGTGAGCGGCAAGGCTCT
TATTGTCGGTGTATGCAGCGCCGGGGAAGTGGGCAAGGTCTACTATCTGGGTAAGCGCAGCGATCTGACCGGCTTGCTGG
GTACCGGCCCTCTGGTGGACCGCCTGCAGCATGTCTTTGCCACCGGCGGACAGGACAGCACTGTGCTGGCTGTTCCGGTG
GCAGGGTCGCCCGGTGGAACCATCAGCACGCTCAAGCATACCGGCACTGGTCCCGAAGCCCGCGCCAGTGGCCTTCCCGG
TGGCAATGCCGATGTGATTGCCGAAATAGTGGATGCCGGTGCTCCCGGCGTTGCCACGTGCAAGTTGAGCAAGGACGGCG
GGGCAACATTCGGAGTGGCCGCCGCCGTGCCTGCCAATGGGCAGATCAGCGTTGCCGATACCGGTACCACCATCGTGCTG
GCAGCAGGCAATCTAATGGCTGGCGACCGCTACCGCTACTCGGTGCGTGGTCCCATCGGCCCTGTTACCCGCATCGGTTT
GGGGCCGGAGATCACTGCAGCGGGAACCGTAAAGGCCGGGGCCGAAGTGGTGCTGCAGATCGTCAAGGGCGGTGACCGCA
ACGAAGGCCAGTATCGCCTTTCCGTGGATGGCGGCGACAATTTCGGCCCGTATCGCACCATCCCGGTGGATGGTCAGATT
CCTGTGGCCGACACCGGCGTTACCATCACCTGTCCGGCAGGCGATTATCCGCTGGGTAGCACATACCAGTTCGACCTGCT
TGCCCCGGTGCCCACCATCGCGGACGTTATCGACGCATTGACCATCCCGCTGGAAACAGTGGACCCGGAATTCGTCTATG
TGGTCGGTCCGTCCGATTCCGTGGATTGGGCTGCCATGGGCGCACTGGCCGACGACCTTTGGAACCGCCACCGCCCTACG
TTTTTTGTGTGTGAGGGCAGACTGCCCGCAGCCGGTGAAGACCTGAATGACTGGGTAACAGCCCTGAAGCAGGAGCGTAT
GGGGTTTGCCCACCGTTTCGTCAGTGTGTGCGTGGGATTCGGCGAGATCAGCGACCGCACCGGCCTGCGCAAACTCCGCA
ATGCCGGAGGACTGCTGGCCGGGCGTATCATGGAAGTACCCGTGCAGCGTGATATCGGCCGGGTGCGTGACCAGGGCATC
ACCGGCATATCTCTGCCGGAAGGCTACACCGAGGCCATGCAGAGCGAACTGGAAGAAGCCGGGTACATCACGCTTACCCG
GTACGCCGGGTTGCAGGCCGTCTACTGGGGAACAGCCCGGACCATGGCGGATTCCACCAGTGACTATCAGCGGCTTGAAG
TGTTGCGTGTAACGTTCAAGGCTGTGCGCCTCATGCGTCTGCAAGCGCTCAAATCTCTGAAGGATGAACTGGGTGACCCG
CTGCAGGGCGCAGACACCAGCGGTTTAGCCTATCTGCGGGCCAATCTCGAAAATGCGCTGGACACCATGGTCAAGGCCAA
GCCCAAGGAACTGGCCGGGTATGCCGTCTCAATCCCCATGGATCAGGATTTCGTCAACAATGGCGTGGCCACGGAAACCA
CCCTCATCGGCATCCCCATCATTGATACCATCAAACTGTTTTCGTCCTACGTCTACGCGGGCGGCAAATTCGATCCGCGC
ATGGCGGCATAG

Upstream 100 bases:

>100_bases
GCGCAGAGAGCTGGACGGACGACAAGTCCGTTACCAAAGCCGAATTTGATGCCGCAGTCACCCGGCTGCGCGAACGCCGT
GTCGGCGGCGGGAGGTAGCC

Downstream 100 bases:

>100_bases
GAGCTAGACCATGACAGCTAACGCAACCGTCACCGTCAACGGTGCCGTGCACGACTGGGAGAGCGTGAGCATCACCGGTC
CTCATGGTGCCTTTGTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVDRLQHVFATGGQDSTVLAVPV
AGSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAGAPGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVL
AAGNLMAGDRYRYSVRGPIGPVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQI
PVADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDSVDWAAMGALADDLWNRHRPT
FFVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGFGEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGI
TGISLPEGYTEAMQSELEEAGYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDP
LQGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPIIDTIKLFSSYVYAGGKFDPR
MAA

Sequences:

>Translated_563_residues
MARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVDRLQHVFATGGQDSTVLAVPV
AGSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAGAPGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVL
AAGNLMAGDRYRYSVRGPIGPVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQI
PVADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDSVDWAAMGALADDLWNRHRPT
FFVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGFGEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGI
TGISLPEGYTEAMQSELEEAGYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDP
LQGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPIIDTIKLFSSYVYAGGKFDPR
MAA
>Mature_562_residues
ARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVDRLQHVFATGGQDSTVLAVPVA
GSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAGAPGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVLA
AGNLMAGDRYRYSVRGPIGPVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQIP
VADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDSVDWAAMGALADDLWNRHRPTF
FVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGFGEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGIT
GISLPEGYTEAMQSELEEAGYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDPL
QGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPIIDTIKLFSSYVYAGGKFDPRM
AA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59051; Mature: 58920

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVD
CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEECCCCHHHH
RLQHVFATGGQDSTVLAVPVAGSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAG
HHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHHHCC
APGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVLAAGNLMAGDRYRYSVRGPIG
CCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCEEECCCEEEEECCCCC
PVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQI
CHHEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCCCC
PVADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDS
CEECCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEECCCCEEEEECCCCC
VDWAAMGALADDLWNRHRPTFFVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGF
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGITGISLPEGYTEAMQSELEEA
CCCCCHHHHHHHHHCCCEEECHHEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
GYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDP
CCEEEEECCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LQGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHCCCCCCCEEEEECCH
IDTIKLFSSYVYAGGKFDPRMAA
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ARKDVFEFLVDGTSGLVPGDVSGKALIVGVCSAGEVGKVYYLGKRSDLTGLLGTGPLVD
CHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEECCCCHHHH
RLQHVFATGGQDSTVLAVPVAGSPGGTISTLKHTGTGPEARASGLPGGNADVIAEIVDAG
HHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHHHCC
APGVATCKLSKDGGATFGVAAAVPANGQISVADTGTTIVLAAGNLMAGDRYRYSVRGPIG
CCCEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCEEECCCEEEEECCCCC
PVTRIGLGPEITAAGTVKAGAEVVLQIVKGGDRNEGQYRLSVDGGDNFGPYRTIPVDGQI
CHHEECCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEECCCCCC
PVADTGVTITCPAGDYPLGSTYQFDLLAPVPTIADVIDALTIPLETVDPEFVYVVGPSDS
CEECCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEECCCCEEEEECCCCC
VDWAAMGALADDLWNRHRPTFFVCEGRLPAAGEDLNDWVTALKQERMGFAHRFVSVCVGF
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GEISDRTGLRKLRNAGGLLAGRIMEVPVQRDIGRVRDQGITGISLPEGYTEAMQSELEEA
CCCCCHHHHHHHHHCCCEEECHHEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
GYITLTRYAGLQAVYWGTARTMADSTSDYQRLEVLRVTFKAVRLMRLQALKSLKDELGDP
CCEEEEECCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LQGADTSGLAYLRANLENALDTMVKAKPKELAGYAVSIPMDQDFVNNGVATETTLIGIPI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHCCCCCCCEEEEECCH
IDTIKLFSSYVYAGGKFDPRMAA
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA