Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358341

Identifier: 78358341

GI number: 78358341

Start: 3288472

End: 3289434

Strand: Direct

Name: 78358341

Synonym: Dde_3301

Alternate gene names: NA

Gene position: 3288472-3289434 (Clockwise)

Preceding gene: 78358340

Following gene: 78358342

Centisome position: 88.16

GC content: 50.47

Gene sequence:

>963_bases
ATGTCAGATGAACAGGACTGGCTGCCGGGCGGCAACGGCTATGACGACCTCAGAATAAATCTTCCTGCAGCTTACAGCAG
ACAGGATGAAACATATAAGTCGGCCAAAAAGAACACTGTCCGAAAATCCTTTCTGCGCAACAAGCTGTCTTTTTTTACGA
CCGCACTGCTGCAAAAGACCCGGTACATGGAACCGCTTGTCATGTGCGGTTTTGTAAAAAAATGGTTCACGGACTTTGAG
GACTACTGGCGCAATGCCCTTAACGGCCGTCCCCTTTATATTGCCGATTTTCACGCCCTGCGTCACGCATACAGGCTGAA
AGTCCAGAATCCTGCGGATTACCGATGGGACAGTCCTGACCTGCACCTTGCCAACTGGCAGAAGCCGCACAACATATACT
CCACATTTTCTTACGTTTACGGGCTCGCATTGCGCCCCATACGCGCCTACAAAGCCTTCAGGCACCTGTCTGCGGGCATG
CGCGCCCTTGAATTCGGCTGCTCACTCGCTCCGTACTACCGCACATGGAAAAACTATTATAACCATATCCCAGTATCATG
GACACTTACGGATATCGCCAACTTTCCTTTCCATTATGCGCGCCATTTATACATGCGGGACGACGCCGTCACCGACATGC
CGGTAATCTCTCCCGAAAAATTCGATCAGCCGCTTGAGGACGGAAAAGTCTACGACTTCATTGTCATCACCACTGTTTTT
GAACACCTGCACAAACCCCTGACCATTGCCAGACATCTGCTGGACCATCTGGCGCCGGGCGGCATTTTTGTTTTTGATTA
TATTCTCTCCGGTGAGGCGACAGAACTGGACACACCGGGCGGTGTCAAAGAACGGACAGAAACGCTTCAATTTCTGTCCG
AAAACCTGACAATACTCTCCGGTTCACTTGACAACATCAATGAATCAGTAGGGCTGTGCATCGGACAGAAAAAGACGGGA
TAG

Upstream 100 bases:

>100_bases
GTAATGCAGAATAGTATAAAATTCTGCTGCGCCTCTTTTGCTACAGCGGCGGTAAAGCTGTTCCGGCCTCAAGCCGGCAA
TTTTCAGTAAAGGAAACCTC

Downstream 100 bases:

>100_bases
CACCGTAGTACACTCAACCAGCAGATAGAAAAACCGAGCTGCACCGACGGCAAAAACAGCAAACTCAGAACAGCGCTCCG
TGCAATGCATGCTGCATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKTRYMEPLVMCGFVKKWFTDFE
DYWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPDLHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGM
RALEFGCSLAPYYRTWKNYYNHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVF
EHLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILSGSLDNINESVGLCIGQKKTG

Sequences:

>Translated_320_residues
MSDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKTRYMEPLVMCGFVKKWFTDFE
DYWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPDLHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGM
RALEFGCSLAPYYRTWKNYYNHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVF
EHLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILSGSLDNINESVGLCIGQKKTG
>Mature_319_residues
SDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKTRYMEPLVMCGFVKKWFTDFED
YWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPDLHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGMR
ALEFGCSLAPYYRTWKNYYNHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVFE
HLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILSGSLDNINESVGLCIGQKKTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37118; Mature: 36986

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKT
CCCCCCCCCCCCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYMEPLVMCGFVKKWFTDFEDYWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCCC
LHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGMRALEFGCSLAPYYRTWKNYY
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
NHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVF
CCCCCEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHHHH
EHLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILS
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
GSLDNINESVGLCIGQKKTG
CCHHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
SDEQDWLPGGNGYDDLRINLPAAYSRQDETYKSAKKNTVRKSFLRNKLSFFTTALLQKT
CCCCCCCCCCCCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYMEPLVMCGFVKKWFTDFEDYWRNALNGRPLYIADFHALRHAYRLKVQNPADYRWDSPD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHEEECCCCCCCCCCCC
LHLANWQKPHNIYSTFSYVYGLALRPIRAYKAFRHLSAGMRALEFGCSLAPYYRTWKNYY
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
NHIPVSWTLTDIANFPFHYARHLYMRDDAVTDMPVISPEKFDQPLEDGKVYDFIVITTVF
CCCCCEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEHHHHHHHHH
EHLHKPLTIARHLLDHLAPGGIFVFDYILSGEATELDTPGGVKERTETLQFLSENLTILS
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
GSLDNINESVGLCIGQKKTG
CCHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA