Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358283

Identifier: 78358283

GI number: 78358283

Start: 3239165

End: 3240226

Strand: Direct

Name: 78358283

Synonym: Dde_3243

Alternate gene names: NA

Gene position: 3239165-3240226 (Clockwise)

Preceding gene: 78358282

Following gene: 78358284

Centisome position: 86.84

GC content: 60.36

Gene sequence:

>1062_bases
ATGAAGGGATTGTACATCGGTTCCACAGGCCCCTGGGCGGGCAAAAACCTTGCTGCCATGGCCGTCGGGCTGTGGCTGCA
GCGTGAAGGTCTGCGTGTGGGCTACATGAAACCGCTGGGCGCCCGCCCCAAGACCGTGGACGAAATAGTCGGCGATGAAG
ACGCCTTTTTCGTACAGGAGGTGCTGGGGCTGGAAGACGATCCCGCGCTGGTCACTCCCGTCATCACCCCTGCCAACCTG
CGCACCTGCTCGCTGGCAGACCGGAAAAACGAAATGGAACGCGTCCGCGAAGCGTACGAGACATTGTCCCGGGGGCGGGA
CATCATGCTCGTGGGCGGTTGCGGAGAATTCCTGCATTCCGGCAGACACGCCGGAATAAGCGGTCCCGCACTTGTGCGCC
GGCTGGGGCTTAAGGCTCTGGTGGTGGACAGATACGACGGCGCGCTGCACTACGACGCGCTGCTGGGATACCGTGAAGTC
CTCGGAGACGCTCTTGCGGGCGTGCTGTTCAACGATGTTCCCGAAGACTACCTGCGTGATGCAGAGGAAATGCTTGTGCC
CTATCTTTCCGAGCACGGCATACCGGCCCTCGGCATTGTGCCGCGTGACAGGCTGCTCAACGCCATCAAGGCGGTGGAGC
TGGCATGGCGGCTGGGCGGCAGGATAGTTTCCGGCAACAGGGAATCGGGCCGGATTGTGGAAGACTTCCTGATCGGCACC
ATGCAGGTGGACAACTTCATGTCCCATTTCAAACAGCACGCAAACTCGGCCACCATCGTGGGCGGCGACCGGACGGATCT
GCAGCTGGTGGCACTGGAAGGCCAGTGTCCCTGCCTTATTCTGACCGGCAACATCACCCCCGATGAAATCATCCGCACCC
GATCCGAGGCGCGCGGGGTACCGGTTATCGTTGTCCGCGAAGACACATACACCGTTGCCCGCAAAATGGAAGAAATCCTT
AACAGCCAGAAACTGCGGGAACTTGTAAAAATCCGCCGTGCCGCCCAGATGGTGGATAACACCATGGACTACCCCGCATT
GAAGGCTCAACTCGGCTTCTAA

Upstream 100 bases:

>100_bases
CAACCGGACCTGTGCCGCAAGGCATGACATAGACGCGGGGGCGGGGCTCCGGCAGCTCCGCCCCCTTTTTTCTTCCGGCA
ACGGATGCAGAGAGACACAT

Downstream 100 bases:

>100_bases
TTCAGGAGAACACCACATGTCCCAAGACCTGTCCCGGCTTATGCGTGAGAAAGCCGAACTGGTGGCTGCCACGGTGGCAG
AGGTAAAATCCATCGAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQEVLGLEDDPALVTPVITPANL
RTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHSGRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREV
LGDALAGVLFNDVPEDYLRDAEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT
MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGVPVIVVREDTYTVARKMEEIL
NSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF

Sequences:

>Translated_353_residues
MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQEVLGLEDDPALVTPVITPANL
RTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHSGRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREV
LGDALAGVLFNDVPEDYLRDAEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT
MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGVPVIVVREDTYTVARKMEEIL
NSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF
>Mature_353_residues
MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQEVLGLEDDPALVTPVITPANL
RTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHSGRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREV
LGDALAGVLFNDVPEDYLRDAEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT
MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGVPVIVVREDTYTVARKMEEIL
NSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF

Specific function: Unknown

COG id: COG0857

COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1212 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR010766 [H]

Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]

EC number: NA

Molecular weight: Translated: 38879; Mature: 38879

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQE
CCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCHHHHHHH
VLGLEDDPALVTPVITPANLRTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHS
HHCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHC
GRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREVLGDALAGVLFNDVPEDYLRD
CCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
AEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH
MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGV
HHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCC
PVIVVREDTYTVARKMEEILNSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure
MKGLYIGSTGPWAGKNLAAMAVGLWLQREGLRVGYMKPLGARPKTVDEIVGDEDAFFVQE
CCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCHHHHHHH
VLGLEDDPALVTPVITPANLRTCSLADRKNEMERVREAYETLSRGRDIMLVGGCGEFLHS
HHCCCCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHC
GRHAGISGPALVRRLGLKALVVDRYDGALHYDALLGYREVLGDALAGVLFNDVPEDYLRD
CCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
AEEMLVPYLSEHGIPALGIVPRDRLLNAIKAVELAWRLGGRIVSGNRESGRIVEDFLIGT
HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHH
MQVDNFMSHFKQHANSATIVGGDRTDLQLVALEGQCPCLILTGNITPDEIIRTRSEARGV
HHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCC
PVIVVREDTYTVARKMEEILNSQKLRELVKIRRAAQMVDNTMDYPALKAQLGF
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]