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The map label for this gene is dcrA [H]

Identifier: 78358114

GI number: 78358114

Start: 3063780

End: 3065369

Strand: Reverse

Name: dcrA [H]

Synonym: Dde_3074

Alternate gene names: 78358114

Gene position: 3065369-3063780 (Counterclockwise)

Preceding gene: 78358128

Following gene: 78358112

Centisome position: 82.18

GC content: 59.81

Gene sequence:

>1590_bases
ATGTTTTCTAAGATTTCGGTTAAGGCGCTGGCTCTGCTGACCGCAGCTGCCGGACTGGCTGTGCCGCTGTGTGTTGCGGG
GTGGCAGTATGCCTCTGCCCCGTCCGGCGATGTGCGCAGCCTGCTGCTGTGGGGGGCGGTGAGCACTGTTGCGGCGTACT
GTCTTGTCGTGGTGCCGCTGGCTGTGGTGCTGGTGCGCAAGGTTACGCGTCCCGTGGCGGAAATACAGCAGCGTGTGGAA
AAAATTCTGGACGGCGATTACAGCGTCTGCTTTGCCTGTGACGGAGGCGACGAGCTGGCTGAAATGCGTCTTGCACTTGA
TTCGCTGCTTTCACGGCTCAAGTACAATCTGGGATTTGCACAGGGCGTTCTCAAAGGTATCGATACTCCCTTTGTGGTGG
TGGATAATGATGAGGTGCTGACCTACACAAACCCGTCGCTCATCAGTCTGCTGGAGCAGACCGGAAAGCCGGAAGACCAC
TACGGGCAGAACGTGGCGTTGTTTTTTTACGGCGATGCATCGCGCAGAACAGTGCTCCGCGACAGTCTGGAGCATCATAC
CGTGACCAGCCGCGAGGTGGATCTGACCACGCGCAAGGGCAACACGCGGCGCATTCAGATTCATGCCTCGCCGCTGTTTG
ACCTGTCGGGCGGGCTTATGGGCGCATTGTGCATCTATCAGGATCTGACAGACCTGCGTGCGCGCGAGGCGGAGATAGTC
TCCAAGAATGAGAGTATCGCCGCCGCAGTGAAATCGTCTGAAACGGTTTCGCTTACCGTGAGTGAAATTGCCGGAAGCGT
GGACCAGCTGATAATGCAGTCTGCCAGAGATGCAGAGACACAGACGGAACGGACGGTGGAAAGCGCGTCTGCCATGGAGC
AGATGAACGTCGCGGTGCTGGATGTGGCGCGCAGTGCCTCAGCGGCTGCGGAACAGGCGGGCATAGCCTGCGACAAGGCC
CGTCAGGGGGCCGGGGTGGTGGAAGAAGCCATGAACGCCATTGACGAGGTGGCGCGGCTGGCGGAAGGCCTGAAGGTGAG
CATGGGCGATCTGGGGCGTCAGGCCGAAGGTATAGGACAGGTGATGACGGTCATCAGCGACATTGCCGACCAGACCAACC
TGCTGGCGCTTAACGCAGCCATCGAGGCCGCCCGTGCCGGTGACGCCGGACGGGGCTTTGCCGTGGTGGCCGATGAAGTG
CGCAAGCTGGCGGAAAAAACCATGCAGGCAACTTCAGAGGTGGGCGCGGCCATTACCTCGATACAGGCGGGCACCCGCAA
TAATGTGCAGAACGTTGAAGCATCGGTGCTGGCGGTGCAGCGTTCCCGCGAGCTTTCATCGGCTTCCGGTGATTCGCTGC
GCGAAATTGTGGATCTGGTCATCCGCACCACCGATCAGGTGCAGGCCATCGCCACGGCAAGCGAAGAACAGTCTTCCACC
AGCGAACATATAAGTCAGGCGGTGGACGAGGTGCGCATCATTTCTGAAAATTCGGCGCGTTCGCTGGCTGAAGCCGCGGG
CATGGTGCACAAGCTTTCCGCAAAGGCCGGTGAACTGCAGCGCATCATTTCCACGGTGGCGTCTTCGTAA

Upstream 100 bases:

>100_bases
GTAACGCGTTACAGATATCTGACGATATGGTTACAAAAGCGGGTGCACCTCTCATTTCGGGAAAAATCAGCGGCGTGCAC
CGGTGAAGGGAGGCCTGGTA

Downstream 100 bases:

>100_bases
CCTGCTGTGCGTTACTCAACGGCTTTTTCTGAACAGCCGGTATGCAAGGCCGTTCCGCATGCGGGGCGGCTTTTTGCATG
ACCGGAGCACAAACATGCCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MFSKISVKALALLTAAAGLAVPLCVAGWQYASAPSGDVRSLLLWGAVSTVAAYCLVVVPLAVVLVRKVTRPVAEIQQRVE
KILDGDYSVCFACDGGDELAEMRLALDSLLSRLKYNLGFAQGVLKGIDTPFVVVDNDEVLTYTNPSLISLLEQTGKPEDH
YGQNVALFFYGDASRRTVLRDSLEHHTVTSREVDLTTRKGNTRRIQIHASPLFDLSGGLMGALCIYQDLTDLRAREAEIV
SKNESIAAAVKSSETVSLTVSEIAGSVDQLIMQSARDAETQTERTVESASAMEQMNVAVLDVARSASAAAEQAGIACDKA
RQGAGVVEEAMNAIDEVARLAEGLKVSMGDLGRQAEGIGQVMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEV
RKLAEKTMQATSEVGAAITSIQAGTRNNVQNVEASVLAVQRSRELSSASGDSLREIVDLVIRTTDQVQAIATASEEQSST
SEHISQAVDEVRIISENSARSLAEAAGMVHKLSAKAGELQRIISTVASS

Sequences:

>Translated_529_residues
MFSKISVKALALLTAAAGLAVPLCVAGWQYASAPSGDVRSLLLWGAVSTVAAYCLVVVPLAVVLVRKVTRPVAEIQQRVE
KILDGDYSVCFACDGGDELAEMRLALDSLLSRLKYNLGFAQGVLKGIDTPFVVVDNDEVLTYTNPSLISLLEQTGKPEDH
YGQNVALFFYGDASRRTVLRDSLEHHTVTSREVDLTTRKGNTRRIQIHASPLFDLSGGLMGALCIYQDLTDLRAREAEIV
SKNESIAAAVKSSETVSLTVSEIAGSVDQLIMQSARDAETQTERTVESASAMEQMNVAVLDVARSASAAAEQAGIACDKA
RQGAGVVEEAMNAIDEVARLAEGLKVSMGDLGRQAEGIGQVMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEV
RKLAEKTMQATSEVGAAITSIQAGTRNNVQNVEASVLAVQRSRELSSASGDSLREIVDLVIRTTDQVQAIATASEEQSST
SEHISQAVDEVRIISENSARSLAEAAGMVHKLSAKAGELQRIISTVASS
>Mature_529_residues
MFSKISVKALALLTAAAGLAVPLCVAGWQYASAPSGDVRSLLLWGAVSTVAAYCLVVVPLAVVLVRKVTRPVAEIQQRVE
KILDGDYSVCFACDGGDELAEMRLALDSLLSRLKYNLGFAQGVLKGIDTPFVVVDNDEVLTYTNPSLISLLEQTGKPEDH
YGQNVALFFYGDASRRTVLRDSLEHHTVTSREVDLTTRKGNTRRIQIHASPLFDLSGGLMGALCIYQDLTDLRAREAEIV
SKNESIAAAVKSSETVSLTVSEIAGSVDQLIMQSARDAETQTERTVESASAMEQMNVAVLDVARSASAAAEQAGIACDKA
RQGAGVVEEAMNAIDEVARLAEGLKVSMGDLGRQAEGIGQVMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEV
RKLAEKTMQATSEVGAAITSIQAGTRNNVQNVEASVLAVQRSRELSSASGDSLREIVDLVIRTTDQVQAIATASEEQSST
SEHISQAVDEVRIISENSARSLAEAAGMVHKLSAKAGELQRIISTVASS

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=222, Percent_Identity=36.9369369369369, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1788194, Length=269, Percent_Identity=34.2007434944238, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI2367378, Length=238, Percent_Identity=36.9747899159664, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787690, Length=237, Percent_Identity=34.5991561181435, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1789453, Length=244, Percent_Identity=31.9672131147541, Blast_Score=99, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 55993; Mature: 55993

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50885 HAMP ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKISVKALALLTAAAGLAVPLCVAGWQYASAPSGDVRSLLLWGAVSTVAAYCLVVVPL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVVLVRKVTRPVAEIQQRVEKILDGDYSVCFACDGGDELAEMRLALDSLLSRLKYNLGFA
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHH
QGVLKGIDTPFVVVDNDEVLTYTNPSLISLLEQTGKPEDHYGQNVALFFYGDASRRTVLR
HHHHHCCCCCEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
DSLEHHTVTSREVDLTTRKGNTRRIQIHASPLFDLSGGLMGALCIYQDLTDLRAREAEIV
HHHHHCCCCCCEEEEEECCCCEEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SKNESIAAAVKSSETVSLTVSEIAGSVDQLIMQSARDAETQTERTVESASAMEQMNVAVL
CCCCHHHHHHCCCCEEEEEHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DVARSASAAAEQAGIACDKARQGAGVVEEAMNAIDEVARLAEGLKVSMGDLGRQAEGIGQ
HHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCEECHHHCCHHHHHHHH
VMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATSEVGAAITS
HHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQAGTRNNVQNVEASVLAVQRSRELSSASGDSLREIVDLVIRTTDQVQAIATASEEQSST
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHCHH
SEHISQAVDEVRIISENSARSLAEAAGMVHKLSAKAGELQRIISTVASS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSKISVKALALLTAAAGLAVPLCVAGWQYASAPSGDVRSLLLWGAVSTVAAYCLVVVPL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVVLVRKVTRPVAEIQQRVEKILDGDYSVCFACDGGDELAEMRLALDSLLSRLKYNLGFA
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHH
QGVLKGIDTPFVVVDNDEVLTYTNPSLISLLEQTGKPEDHYGQNVALFFYGDASRRTVLR
HHHHHCCCCCEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
DSLEHHTVTSREVDLTTRKGNTRRIQIHASPLFDLSGGLMGALCIYQDLTDLRAREAEIV
HHHHHCCCCCCEEEEEECCCCEEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SKNESIAAAVKSSETVSLTVSEIAGSVDQLIMQSARDAETQTERTVESASAMEQMNVAVL
CCCCHHHHHHCCCCEEEEEHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DVARSASAAAEQAGIACDKARQGAGVVEEAMNAIDEVARLAEGLKVSMGDLGRQAEGIGQ
HHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCEECHHHCCHHHHHHHH
VMTVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATSEVGAAITS
HHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQAGTRNNVQNVEASVLAVQRSRELSSASGDSLREIVDLVIRTTDQVQAIATASEEQSST
HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHCHH
SEHISQAVDEVRIISENSARSLAEAAGMVHKLSAKAGELQRIISTVASS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]