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The map label for this gene is yfbG [C]

Identifier: 78358100

GI number: 78358100

Start: 3051577

End: 3052572

Strand: Direct

Name: yfbG [C]

Synonym: Dde_3060

Alternate gene names: 78358100

Gene position: 3051577-3052572 (Clockwise)

Preceding gene: 78358099

Following gene: 78358101

Centisome position: 81.81

GC content: 58.03

Gene sequence:

>996_bases
ATGCAACAGGGAGAATTCAAAAATCTTGCCCGCAAGCGCATTCTGGTAACCGGCGGGGCGGGCTTCATCGGTTCGCACCT
GTGCCGGGTGCTGCTCGACAGAGGTGCAGAGGTGCTGTGTGCGGACAACTATTTCACCGGCAGCCGCGACCATGTGCGCG
ACCTGCTGGATAACCCGCGCTTTGAGCTGCTGCGTCACGACATCACCTTTCCGCTCTACATAGAGGTGGACGAAATATAC
AATCTGGCCTGTCCGGCATCACCGGTGCATTACCAGTTTGACCCCGTGCAGACCACAAAGACATGCGTACACGGCAGCAT
CAATATGCTGGGTCTTGCCAAACGGGTCAAAGCACGCATTCTGCAGGCATCCACCAGCGAAGTGTACGGCGACCCGGAAA
TACACCCCCAGCAGGAAGACTACTGGGGGCGCGTGAACCCCATCGGGCCACGGTCGTGCTACGACGAAGGCAAGCGCTGC
GCAGAAACGCTTTTTATGGACTACCGGCGGCAACACGGTGTGGAAATCAAAATAGCCCGTATTTTCAACACCTACGGCCC
CAACATGCACCCGAATGACGGCAGGGTTGTGTCAAATTTCATCCTGCAGGCACTGCAGCACAAACCCATTACCATTTACG
GCGACGGCTCGCAGACGCGGTCATTCTGCTATGTGGACGATCTGGTGTCGGGCCTGCTGCGGCTGATGCACAGCCCGGCC
GATTTCTGCGGGCCGGTCAATCTGGGCAATCCCTCCGAACGTACGGTGCTTGAACTTGCCGACAAAATCATCACCCTCAC
CGGCTCGCGTTCCGAACTTGTATTCAAACCGCTGCCCGCAGACGACCCGCAGCGCCGCAGACCGGACATAAGCATGGCCC
GCCGTCATCTGGAATGGGAACCCGCCGTGGATATAGATGAAGGACTGGCAGAAACCATCCGCTATTTTGACGCCCTGCTC
ACGGCGCGCAAAGCCGAGGGAGCAGATATACGCTGA

Upstream 100 bases:

>100_bases
CCAGAACCCTGACCGACGAAGAATTCAAACTGGCAGCGGGCGCGCTGGCACAGGCCCTGAACGTCTGAATATCCCCGACG
GCCATCAAACGGAGAACTGC

Downstream 100 bases:

>100_bases
CCAGACGGCTGCGCGATGCCGCAGCCGCATCACAGCACAAAACCGGACTTTTTTGTGCACCCACTGAATCACCGGAGAAA
CATTCGCATGAACGCAAAGC

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MQQGEFKNLARKRILVTGGAGFIGSHLCRVLLDRGAEVLCADNYFTGSRDHVRDLLDNPRFELLRHDITFPLYIEVDEIY
NLACPASPVHYQFDPVQTTKTCVHGSINMLGLAKRVKARILQASTSEVYGDPEIHPQQEDYWGRVNPIGPRSCYDEGKRC
AETLFMDYRRQHGVEIKIARIFNTYGPNMHPNDGRVVSNFILQALQHKPITIYGDGSQTRSFCYVDDLVSGLLRLMHSPA
DFCGPVNLGNPSERTVLELADKIITLTGSRSELVFKPLPADDPQRRRPDISMARRHLEWEPAVDIDEGLAETIRYFDALL
TARKAEGADIR

Sequences:

>Translated_331_residues
MQQGEFKNLARKRILVTGGAGFIGSHLCRVLLDRGAEVLCADNYFTGSRDHVRDLLDNPRFELLRHDITFPLYIEVDEIY
NLACPASPVHYQFDPVQTTKTCVHGSINMLGLAKRVKARILQASTSEVYGDPEIHPQQEDYWGRVNPIGPRSCYDEGKRC
AETLFMDYRRQHGVEIKIARIFNTYGPNMHPNDGRVVSNFILQALQHKPITIYGDGSQTRSFCYVDDLVSGLLRLMHSPA
DFCGPVNLGNPSERTVLELADKIITLTGSRSELVFKPLPADDPQRRRPDISMARRHLEWEPAVDIDEGLAETIRYFDALL
TARKAEGADIR
>Mature_331_residues
MQQGEFKNLARKRILVTGGAGFIGSHLCRVLLDRGAEVLCADNYFTGSRDHVRDLLDNPRFELLRHDITFPLYIEVDEIY
NLACPASPVHYQFDPVQTTKTCVHGSINMLGLAKRVKARILQASTSEVYGDPEIHPQQEDYWGRVNPIGPRSCYDEGKRC
AETLFMDYRRQHGVEIKIARIFNTYGPNMHPNDGRVVSNFILQALQHKPITIYGDGSQTRSFCYVDDLVSGLLRLMHSPA
DFCGPVNLGNPSERTVLELADKIITLTGSRSELVFKPLPADDPQRRRPDISMARRHLEWEPAVDIDEGLAETIRYFDALL
TARKAEGADIR

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=306, Percent_Identity=61.437908496732, Blast_Score=400, Evalue=1e-111,
Organism=Homo sapiens, GI7657641, Length=326, Percent_Identity=27.3006134969325, Blast_Score=102, Evalue=6e-22,
Organism=Escherichia coli, GI1788589, Length=339, Percent_Identity=26.8436578171091, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1788353, Length=338, Percent_Identity=26.3313609467456, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI48994969, Length=340, Percent_Identity=25.5882352941176, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786974, Length=336, Percent_Identity=25.297619047619, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788365, Length=334, Percent_Identity=23.3532934131737, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788366, Length=355, Percent_Identity=27.0422535211268, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17539532, Length=322, Percent_Identity=57.7639751552795, Blast_Score=387, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI115532424, Length=326, Percent_Identity=27.9141104294479, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17568069, Length=338, Percent_Identity=27.810650887574, Blast_Score=86, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6319493, Length=358, Percent_Identity=23.7430167597765, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356223, Length=311, Percent_Identity=59.4855305466238, Blast_Score=386, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 37426; Mature: 37426

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGEFKNLARKRILVTGGAGFIGSHLCRVLLDRGAEVLCADNYFTGSRDHVRDLLDNPR
CCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCH
FELLRHDITFPLYIEVDEIYNLACPASPVHYQFDPVQTTKTCVHGSINMLGLAKRVKARI
HHHHHHCCCCEEEEEHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHH
LQASTSEVYGDPEIHPQQEDYWGRVNPIGPRSCYDEGKRCAETLFMDYRRQHGVEIKIAR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
IFNTYGPNMHPNDGRVVSNFILQALQHKPITIYGDGSQTRSFCYVDDLVSGLLRLMHSPA
EHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCH
DFCGPVNLGNPSERTVLELADKIITLTGSRSELVFKPLPADDPQRRRPDISMARRHLEWE
HHCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCCCHHHCCCCHHHHHHCCCCC
PAVDIDEGLAETIRYFDALLTARKAEGADIR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQQGEFKNLARKRILVTGGAGFIGSHLCRVLLDRGAEVLCADNYFTGSRDHVRDLLDNPR
CCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCH
FELLRHDITFPLYIEVDEIYNLACPASPVHYQFDPVQTTKTCVHGSINMLGLAKRVKARI
HHHHHHCCCCEEEEEHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHH
LQASTSEVYGDPEIHPQQEDYWGRVNPIGPRSCYDEGKRCAETLFMDYRRQHGVEIKIAR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
IFNTYGPNMHPNDGRVVSNFILQALQHKPITIYGDGSQTRSFCYVDDLVSGLLRLMHSPA
EHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCH
DFCGPVNLGNPSERTVLELADKIITLTGSRSELVFKPLPADDPQRRRPDISMARRHLEWE
HHCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCCCHHHCCCCHHHHHHCCCCC
PAVDIDEGLAETIRYFDALLTARKAEGADIR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]