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The map label for this gene is yfcH [H]

Identifier: 78358041

GI number: 78358041

Start: 2986295

End: 2987248

Strand: Direct

Name: yfcH [H]

Synonym: Dde_3001

Alternate gene names: 78358041

Gene position: 2986295-2987248 (Clockwise)

Preceding gene: 78358040

Following gene: 78358042

Centisome position: 80.06

GC content: 62.89

Gene sequence:

>954_bases
ATGAACGCAGTGATACTGGGCGGAACAGGATTTATAGGTACGGCACTGGCCCGAAGCATGATGGCAGAAGGCGGTGCCAC
GGTAATACCCACCCGCGATCCTGAAAAAAGCAGAAAGCGCCTGCCCGCCGACATGGCGGCCAAGGTGGCGCTGGTACCGT
GGGACGGTGCCGGCGGCAAGGCGCTGGCCGCCATAATGGAACAGGCGCAATGTGATGTGCTGGTAAACCTGCTGGGAGAA
AACATCGCTTCGGGCCGCTGGACGCAGCAACTGAAAGAACGCATCGTCGCCAGCAGAGTAAAAGCCGGTGAAGCTGTCAC
AGACGCGCTCAGCCGTCTTCATACCCGCCCTGCAGTTCTGGTTCAGGCTTCGGCCACAGGGTACTACGGCTCGGCACAGC
CGCCCACCGACCCGCTGCTGGCGGCGGAAGACGCCCCTCCCGGCAGCGGATTTCTGGCAGACACCACCGTCCGCTGGGAG
GCATCGACGCTGGAAGCCGAATCCATGGGAGTGCGCCGCGTGGTGCTGCGCACCGGTATGGTGCTGGGCACGCATGGCGG
TGCTCTGCCGCGTTTTGTCACGCCTTTCCGGTTGTTTGCCGGCGGCCCGCTGGGCAGCGGCAGGCAGGAGATATCCTGGA
TACATATTGCAGACGAGGTACGCGCCATCAGACACCTTATCAATGACAGTTCACTGCACGGCGCCTTCAACCTTACCGCA
CCGGACCCCGTAACCATGGAATCGTTCTGCCGTCAGCTCGGCACAGCGCTCAACCGCCCCTCGTGGCTGCGCACACCCGC
ATGGCTGCTTGAAACGCTGCTGGGCGAAATGGCAGCGGAACTCATTACCGGCGGCAGACGCATTCTGCCCGCACGGCTTC
TCGCCTCAGGGTTCACATTCCGGTTTCCCACGCTGGGGCAGGCGTTCGACGACCTGTTTCTGCCGCGCAGCTGA

Upstream 100 bases:

>100_bases
GCGTGCAAATGCCGCCCCCGACGGCGGAACCATTGTCACAATGGAGCTGCCTGTGACATAATGCGGTTCCGTCATCATCC
ATCATAACCGGGAGCCACAC

Downstream 100 bases:

>100_bases
ACGGAGAACACATGACACCTCGTTCCATCCTGCTGGTGGAAGACGAACCAGTCGTGGCCTTTGACGTGGCGCACCGGCTG
CAGCTGCTGGGTTATCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNAVILGGTGFIGTALARSMMAEGGATVIPTRDPEKSRKRLPADMAAKVALVPWDGAGGKALAAIMEQAQCDVLVNLLGE
NIASGRWTQQLKERIVASRVKAGEAVTDALSRLHTRPAVLVQASATGYYGSAQPPTDPLLAAEDAPPGSGFLADTTVRWE
ASTLEAESMGVRRVVLRTGMVLGTHGGALPRFVTPFRLFAGGPLGSGRQEISWIHIADEVRAIRHLINDSSLHGAFNLTA
PDPVTMESFCRQLGTALNRPSWLRTPAWLLETLLGEMAAELITGGRRILPARLLASGFTFRFPTLGQAFDDLFLPRS

Sequences:

>Translated_317_residues
MNAVILGGTGFIGTALARSMMAEGGATVIPTRDPEKSRKRLPADMAAKVALVPWDGAGGKALAAIMEQAQCDVLVNLLGE
NIASGRWTQQLKERIVASRVKAGEAVTDALSRLHTRPAVLVQASATGYYGSAQPPTDPLLAAEDAPPGSGFLADTTVRWE
ASTLEAESMGVRRVVLRTGMVLGTHGGALPRFVTPFRLFAGGPLGSGRQEISWIHIADEVRAIRHLINDSSLHGAFNLTA
PDPVTMESFCRQLGTALNRPSWLRTPAWLLETLLGEMAAELITGGRRILPARLLASGFTFRFPTLGQAFDDLFLPRS
>Mature_317_residues
MNAVILGGTGFIGTALARSMMAEGGATVIPTRDPEKSRKRLPADMAAKVALVPWDGAGGKALAAIMEQAQCDVLVNLLGE
NIASGRWTQQLKERIVASRVKAGEAVTDALSRLHTRPAVLVQASATGYYGSAQPPTDPLLAAEDAPPGSGFLADTTVRWE
ASTLEAESMGVRRVVLRTGMVLGTHGGALPRFVTPFRLFAGGPLGSGRQEISWIHIADEVRAIRHLINDSSLHGAFNLTA
PDPVTMESFCRQLGTALNRPSWLRTPAWLLETLLGEMAAELITGGRRILPARLLASGFTFRFPTLGQAFDDLFLPRS

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=319, Percent_Identity=32.6018808777429, Blast_Score=169, Evalue=2e-42,
Organism=Escherichia coli, GI1788642, Length=312, Percent_Identity=40.7051282051282, Blast_Score=209, Evalue=2e-55,
Organism=Drosophila melanogaster, GI28573846, Length=317, Percent_Identity=25.8675078864353, Blast_Score=128, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33831; Mature: 33831

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVILGGTGFIGTALARSMMAEGGATVIPTRDPEKSRKRLPADMAAKVALVPWDGAGGK
CCEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCHHHHCEEEEEECCCCCHH
ALAAIMEQAQCDVLVNLLGENIASGRWTQQLKERIVASRVKAGEAVTDALSRLHTRPAVL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEE
VQASATGYYGSAQPPTDPLLAAEDAPPGSGFLADTTVRWEASTLEAESMGVRRVVLRTGM
EEECCCCCCCCCCCCCCCCEECCCCCCCCCCEECCEEEEEHHHHHHHHHHHHHHHHHHCC
VLGTHGGALPRFVTPFRLFAGGPLGSGRQEISWIHIADEVRAIRHLINDSSLHGAFNLTA
EEECCCCCCCHHHHHHHHHCCCCCCCCCHHEEEEEHHHHHHHHHHHHCCCCCCCEEECCC
PDPVTMESFCRQLGTALNRPSWLRTPAWLLETLLGEMAAELITGGRRILPARLLASGFTF
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE
RFPTLGQAFDDLFLPRS
ECCCHHHHHHHHCCCCC
>Mature Secondary Structure
MNAVILGGTGFIGTALARSMMAEGGATVIPTRDPEKSRKRLPADMAAKVALVPWDGAGGK
CCEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCHHHHCEEEEEECCCCCHH
ALAAIMEQAQCDVLVNLLGENIASGRWTQQLKERIVASRVKAGEAVTDALSRLHTRPAVL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEE
VQASATGYYGSAQPPTDPLLAAEDAPPGSGFLADTTVRWEASTLEAESMGVRRVVLRTGM
EEECCCCCCCCCCCCCCCCEECCCCCCCCCCEECCEEEEEHHHHHHHHHHHHHHHHHHCC
VLGTHGGALPRFVTPFRLFAGGPLGSGRQEISWIHIADEVRAIRHLINDSSLHGAFNLTA
EEECCCCCCCHHHHHHHHHCCCCCCCCCHHEEEEEHHHHHHHHHHHHCCCCCCCEEECCC
PDPVTMESFCRQLGTALNRPSWLRTPAWLLETLLGEMAAELITGGRRILPARLLASGFTF
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE
RFPTLGQAFDDLFLPRS
ECCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]