| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358015
Identifier: 78358015
GI number: 78358015
Start: 2957766
End: 2958587
Strand: Direct
Name: 78358015
Synonym: Dde_2975
Alternate gene names: NA
Gene position: 2957766-2958587 (Clockwise)
Preceding gene: 78358007
Following gene: 78358016
Centisome position: 79.29
GC content: 64.48
Gene sequence:
>822_bases ATGAACACTTTTCCGGCACCGCACCTTCAGCAGCAGACAGACCGCAACACCCCGCCTCCACGGCAGATTCCCCTTTACCG GCTGGACCCGCGCGCCCGGCTGCTCTGCGCAGGCACGCTGGGCGTACTGGTGTGGCAGGCTCCGCCCCTTGCCGTGGCTG CCTATGCACTGCTGGTGGCTGCCCTGTTTCTTTTTTCCGGCACGGCCACCCGCACGGGATTTTCCATGGCCCGGCCGTAT CTCTGGTTTGTGCTGTTATGGGCCGGCGTAAAGCTGGCGGCAGACACTGCCGGACTGGGCCCCGCGGCACAGGCGACCGC ACTGCCCGCAGCAGACCGGCTGCTGGAAGCCCTGCCTCAGGCAGGCCTGATGGCTCTGCGTCTGATGGTGCTCATCGGCA TAGGGCTGCTGCTGACGCTGACAGGCTCTCCCCGCTCTCTGGGACTGGCCATGGCATGGTTTCTGAAACCCGTGCTCGGG CGGCGGGCATGGCATGCAGCGCTGTCTCTGGCCCTCATGGTGCACTTTCTTCCGCTTATTCAAAAAACAGTGGCGCAGGT TCGTCAGGCCATACGTCTGCGTGCGCCCCGCTGTACGGCTGTGCGCCGGTGGCTGCTCATCCCGCAGGCCACCCTGCGCG TCATGAGCCAGAAAACATGGGCCCAGACCGTGGCCGTGGCGGCAAGAGGGCTGGACTCTCCGGATGCGTGGGAGCCGGAC TTTCCCCGCCAGCCGGGGGCATGGTGCCTGTGCGGACTGTTCCTTCTGCTTGCTGCCGCGCCTGTGTGGCTGCCATTTTG TCTTGACTTTCAAATTTTTTAA
Upstream 100 bases:
>100_bases ACATGTCATCCTCCGGTATTTGCGTGCTTCGGCACAACAGCATATCCTCCGGCTCACCTCAGACAAGTACCGGCAACGCA TTGCCCGGACGGGACACCGC
Downstream 100 bases:
>100_bases TATCAATTCATTTTGAAAGCCAAACAAAACTTACAAAGGTACACCTATGGACACAATTTTTCTGGTGGCGCTGCAAAGCA GTCTGTTTCTGGGCCTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNTFPAPHLQQQTDRNTPPPRQIPLYRLDPRARLLCAGTLGVLVWQAPPLAVAAYALLVAALFLFSGTATRTGFSMARPY LWFVLLWAGVKLAADTAGLGPAAQATALPAADRLLEALPQAGLMALRLMVLIGIGLLLTLTGSPRSLGLAMAWFLKPVLG RRAWHAALSLALMVHFLPLIQKTVAQVRQAIRLRAPRCTAVRRWLLIPQATLRVMSQKTWAQTVAVAARGLDSPDAWEPD FPRQPGAWCLCGLFLLLAAAPVWLPFCLDFQIF
Sequences:
>Translated_273_residues MNTFPAPHLQQQTDRNTPPPRQIPLYRLDPRARLLCAGTLGVLVWQAPPLAVAAYALLVAALFLFSGTATRTGFSMARPY LWFVLLWAGVKLAADTAGLGPAAQATALPAADRLLEALPQAGLMALRLMVLIGIGLLLTLTGSPRSLGLAMAWFLKPVLG RRAWHAALSLALMVHFLPLIQKTVAQVRQAIRLRAPRCTAVRRWLLIPQATLRVMSQKTWAQTVAVAARGLDSPDAWEPD FPRQPGAWCLCGLFLLLAAAPVWLPFCLDFQIF >Mature_273_residues MNTFPAPHLQQQTDRNTPPPRQIPLYRLDPRARLLCAGTLGVLVWQAPPLAVAAYALLVAALFLFSGTATRTGFSMARPY LWFVLLWAGVKLAADTAGLGPAAQATALPAADRLLEALPQAGLMALRLMVLIGIGLLLTLTGSPRSLGLAMAWFLKPVLG RRAWHAALSLALMVHFLPLIQKTVAQVRQAIRLRAPRCTAVRRWLLIPQATLRVMSQKTWAQTVAVAARGLDSPDAWEPD FPRQPGAWCLCGLFLLLAAAPVWLPFCLDFQIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29809; Mature: 29809
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFPAPHLQQQTDRNTPPPRQIPLYRLDPRARLLCAGTLGVLVWQAPPLAVAAYALLVA CCCCCCCCHHHHHCCCCCCCCCCCCEEECCCHHEEHHHHHHHHHHCCCHHHHHHHHHHHH ALFLFSGTATRTGFSMARPYLWFVLLWAGVKLAADTAGLGPAAQATALPAADRLLEALPQ HHHHHCCCCHHCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHCHHHHHHHHHHCH AGLMALRLMVLIGIGLLLTLTGSPRSLGLAMAWFLKPVLGRRAWHAALSLALMVHFLPLI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKTVAQVRQAIRLRAPRCTAVRRWLLIPQATLRVMSQKTWAQTVAVAARGLDSPDAWEPD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC FPRQPGAWCLCGLFLLLAAAPVWLPFCLDFQIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNTFPAPHLQQQTDRNTPPPRQIPLYRLDPRARLLCAGTLGVLVWQAPPLAVAAYALLVA CCCCCCCCHHHHHCCCCCCCCCCCCEEECCCHHEEHHHHHHHHHHCCCHHHHHHHHHHHH ALFLFSGTATRTGFSMARPYLWFVLLWAGVKLAADTAGLGPAAQATALPAADRLLEALPQ HHHHHCCCCHHCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHCHHHHHHHHHHCH AGLMALRLMVLIGIGLLLTLTGSPRSLGLAMAWFLKPVLGRRAWHAALSLALMVHFLPLI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKTVAQVRQAIRLRAPRCTAVRRWLLIPQATLRVMSQKTWAQTVAVAARGLDSPDAWEPD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC FPRQPGAWCLCGLFLLLAAAPVWLPFCLDFQIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA