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The map label for this gene is yhhG [C]

Identifier: 78357996

GI number: 78357996

Start: 2936881

End: 2937300

Strand: Direct

Name: yhhG [C]

Synonym: Dde_2956

Alternate gene names: 78357996

Gene position: 2936881-2937300 (Clockwise)

Preceding gene: 78357995

Following gene: 78357997

Centisome position: 78.73

GC content: 57.14

Gene sequence:

>420_bases
ATGGGCCAGACCATCCGATTCGGCGTTTCACTGGACTCCGACCTGCTGGAAAAATTCGACGCCCTGTGTGATGAACGCTG
CTATCAGACCCGCTCGGAAGCAATCCGCGATCTCATCCGCAACACGCTTGTCCAGCAGGAATGGGAAGATACCGGACGGG
ATATAGCGGGAACCCTGACACTGGTTTTCGATCATCACAAAAGCGACCTGCAGCAGCGGCTGACAGAAATACAGCACGAT
GAGCACGATCTCATCATCACCACGCTGCATGTGCATCTTGACCATGACAACTGCCTGGAAGTGCTGGTGCTCAAAGGCCC
CGCAGAACGCGTGCGCAACCTCGCCCAGAGGCTGACATCCACCCGCGGCGTAAAACACGGCAAACTGAGCCTGACCACCA
CCGGACAGGATCTGGCCTGA

Upstream 100 bases:

>100_bases
TGGGAACTGACCCGCGACGCCTCCGGCGCAGGCCGCGCACGCTGACTCTGCACCGCTTTGCGGCACCGTCCGCCAGACGC
ATCACCACAAGGAGCAACTT

Downstream 100 bases:

>100_bases
TCCGGCTCTGATGCGCCTCTGGTCCGGATCTGATCCGCCTCTGGTCCGCCTCTGATCCGCCTCTGGTCCGGCAGCAGCTC
CGGGCGCAAGGCCGGGGTTT

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MGQTIRFGVSLDSDLLEKFDALCDERCYQTRSEAIRDLIRNTLVQQEWEDTGRDIAGTLTLVFDHHKSDLQQRLTEIQHD
EHDLIITTLHVHLDHDNCLEVLVLKGPAERVRNLAQRLTSTRGVKHGKLSLTTTGQDLA

Sequences:

>Translated_139_residues
MGQTIRFGVSLDSDLLEKFDALCDERCYQTRSEAIRDLIRNTLVQQEWEDTGRDIAGTLTLVFDHHKSDLQQRLTEIQHD
EHDLIITTLHVHLDHDNCLEVLVLKGPAERVRNLAQRLTSTRGVKHGKLSLTTTGQDLA
>Mature_138_residues
GQTIRFGVSLDSDLLEKFDALCDERCYQTRSEAIRDLIRNTLVQQEWEDTGRDIAGTLTLVFDHHKSDLQQRLTEIQHDE
HDLIITTLHVHLDHDNCLEVLVLKGPAERVRNLAQRLTSTRGVKHGKLSLTTTGQDLA

Specific function: Transcriptional regulator (Potential)

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family

Homologues:

Organism=Escherichia coli, GI1789892, Length=109, Percent_Identity=44.0366972477064, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIKR_DESDG (Q30X46)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_389445.1
- HSSP:   O58316
- ProteinModelPortal:   Q30X46
- SMR:   Q30X46
- STRING:   Q30X46
- GeneID:   3757961
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_2956
- NMPDR:   fig|207559.3.peg.2978
- eggNOG:   COG0864
- HOGENOM:   HBG646378
- OMA:   CLEVLVV
- ProtClustDB:   PRK04460
- BioCyc:   DDES207559:DDE_2956-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00476
- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864
- Gene3D:   G3DSA:1.10.1220.10
- Gene3D:   G3DSA:3.30.70.1150

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1; SSF47598 Met_repress_like

EC number: NA

Molecular weight: Translated: 15854; Mature: 15723

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTIRFGVSLDSDLLEKFDALCDERCYQTRSEAIRDLIRNTLVQQEWEDTGRDIAGTLT
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVFDHHKSDLQQRLTEIQHDEHDLIITTLHVHLDHDNCLEVLVLKGPAERVRNLAQRLTS
EEECCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHH
TRGVKHGKLSLTTTGQDLA
HCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
GQTIRFGVSLDSDLLEKFDALCDERCYQTRSEAIRDLIRNTLVQQEWEDTGRDIAGTLT
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVFDHHKSDLQQRLTEIQHDEHDLIITTLHVHLDHDNCLEVLVLKGPAERVRNLAQRLTS
EEECCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHH
TRGVKHGKLSLTTTGQDLA
HCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA