| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is phsA [H]
Identifier: 78357973
GI number: 78357973
Start: 2913238
End: 2915307
Strand: Direct
Name: phsA [H]
Synonym: Dde_2933
Alternate gene names: 78357973
Gene position: 2913238-2915307 (Clockwise)
Preceding gene: 78357972
Following gene: 78357974
Centisome position: 78.1
GC content: 60.97
Gene sequence:
>2070_bases ATGGCACTGGATAGAAGAGGATTCATGAAGTTCGTCGCAGGCGGCACCGCCGGTATCATGGCTTCGCCCCTGCCCTGGAA ACTGCTCGATGACGTGAGCATATGGACGCAGAACTGGCCGTGGATTCCGCGTAACATCGACGGAACCACAGAGTTTGTTC ATACCGTCAGCAAGCTGTGTCCTTCTGCCGTCGGCATGAAGGTCCGCACAGTATCTGGGCGTCCGGTACGCGCTGTAGGC GACCCTGACCATCCGCTGAGCCTTGGCGGCATATCCGCCGTGGCCGCTGCGGAAGTGCAGATGCTGTACAGCCCCGCCCG CATGAAGCGCCCCCTGCGCAGAGCTGCGGACGGTGCCTATGTGGCAATCACATGGGATGAAGCGCTTGCCATGCTCGAAG AGCAGCTGAGCGCCGTAAAAGGCTCCGGCGATAAGCTGGCCTGCCTTTCCGGCGACGATAACGGCACCATCAACGAAGTG CTTTCCGGCCTGCTGGCCAAAGCCGGTTCGTCCAACTTTTTCCTTATGCCCGGCGAGGCACAGCCCGCACAGCGCGCATG GGAACTGATGGGCGGACAGGGCCAGCCCGGCTATGACTTTGAAAACAGCGATTATGTACTGGGCATAGGGGCCAACATCC TCGAATCATGGGGACCGGCCATCCGTCACCGTCACTTTTTCTCCGTGGCGCATCCGCACGGCGAAGAACCCGCGGTGCGT TACGTCTATGCCGGTCCCGTGCAGAACAATACCGCGGCAGGCGCCGACCAGTGGCTGCCCATCAAACCCGGAACCGAAGC TGTCTTCGCTCTGGGGCTTGCCCATCTGCTCATTAAAAAGGGCGCCGTGGCCAACGTGCCCGACTTCGGCGATTTCCGCG CATACACAGCAGAATTCACCCCCGCCAAGGTGGCCAGCCTGACCGGTGTCGATCCCAAAGCTCTTTCCAGAGTTGCGGAC GAGCTGGCCGCGGCATCGCGCCCGCTGGTGGTCACCGGTTCTGAATTCGATCAGGGCGCAGGCGCCGCTACGGCCATGGC CGGTTTTGCGGTCAACCTGCTGCTGGGTGCCGCCTCCGTCAAGGCGCTGCCCGTGGCTGACAGTGCCGTGCAGGGTGCCA TGTCGCGCGCCCGCATGCTCCGTCAGGACTTCATCGCGTACCTGTCGCGCATCAACGCGGGTAAAGCCCCGGCACCGCAG GTACTTATTGTCCACGAAGCCAACCCCGCCTATGCTCTGCCGCAGGCGGACGATATGGCCAAGGTGATGGAAAAGATTCC CTTCAAGGTATCTTTCTCCACCTTCCTTGATGAAACAGCCATGATGTGCGACCTCGTGCTGCCCGTTCCCATGGGCATCG AGCGTCAGGATGATGTGAATACGCCTTACGGCTGCGGTCAGGTGACGTACTGCATGGCGCAGCAGGTCATCGAACCGCTG GTGGACGCCCGCCCCGCAGGGGATGTGCTGCTTTCCACCGCGGCCCGGCTGGGCATGGATCTGGGGCACAGATCATTCGA AAGTGTTCTGAAGGCCAAAGCAGCGGCCATAGGTGCCAACTACCGCAAGGTTTCCGCCGGTACGCCCTATGTCAGCAAGG CTGCTCTGCCCCTTACAGGACTGGCCCTGCGCCCCGATGTGCTCAAACAGACCGTGAGCCTGAGCAGTCCGGCAGAACCC TTTGCCATCGCTCCTGTTCACAAGCTGAACATAGGCACCAGCAACACCGCCACCCCGCCCTTCAACACAAAAACCATCCG CCGCTGGGAACTTCAGGGCGACGAGTTTTATGTGATGATGAACGCGGCCACAGCGCGCAAGCTGGGCGTTAAGCAGCATG ACGCCGTTTCCCTGTCCAACAAGGACGGCTCCATCCGCGCCCGTGTGAACATATTCGAAGGTGTGATGACCGACACCGTG GCAGTGCTGCTCGGTTTCGGACACACGGCGTTCGACGAGTTCAGCAAGGGCAAGGGTGCCAACGTCATGCATCTGCTTAC AGCAGGATTCGAGCCGGTTACCGGACTTTCTGTCTGGAACCGCGCCGGCGTGAACATTGCCAAAGCATAA
Upstream 100 bases:
>100_bases TGGGAATGCGAACGGTGTCACGCCCATCCCGACCATTACGGTGTGACCCGCTCCAGCAACGCATGCTTCGTGTGTCACAA GTAAAAAGGGGTGTGGTGTA
Downstream 100 bases:
>100_bases GGGAAGTACGTCATGTCCTCTAAAAAGGAATTCAAAATCAAATGGGGTATGGCAATAGACCTCGATAAATGCACGGGCTG CGGCGCGTGCATGGTCGCCT
Product: molybdopterin oxidoreductase, molybdopterin-binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MALDRRGFMKFVAGGTAGIMASPLPWKLLDDVSIWTQNWPWIPRNIDGTTEFVHTVSKLCPSAVGMKVRTVSGRPVRAVG DPDHPLSLGGISAVAAAEVQMLYSPARMKRPLRRAADGAYVAITWDEALAMLEEQLSAVKGSGDKLACLSGDDNGTINEV LSGLLAKAGSSNFFLMPGEAQPAQRAWELMGGQGQPGYDFENSDYVLGIGANILESWGPAIRHRHFFSVAHPHGEEPAVR YVYAGPVQNNTAAGADQWLPIKPGTEAVFALGLAHLLIKKGAVANVPDFGDFRAYTAEFTPAKVASLTGVDPKALSRVAD ELAAASRPLVVTGSEFDQGAGAATAMAGFAVNLLLGAASVKALPVADSAVQGAMSRARMLRQDFIAYLSRINAGKAPAPQ VLIVHEANPAYALPQADDMAKVMEKIPFKVSFSTFLDETAMMCDLVLPVPMGIERQDDVNTPYGCGQVTYCMAQQVIEPL VDARPAGDVLLSTAARLGMDLGHRSFESVLKAKAAAIGANYRKVSAGTPYVSKAALPLTGLALRPDVLKQTVSLSSPAEP FAIAPVHKLNIGTSNTATPPFNTKTIRRWELQGDEFYVMMNAATARKLGVKQHDAVSLSNKDGSIRARVNIFEGVMTDTV AVLLGFGHTAFDEFSKGKGANVMHLLTAGFEPVTGLSVWNRAGVNIAKA
Sequences:
>Translated_689_residues MALDRRGFMKFVAGGTAGIMASPLPWKLLDDVSIWTQNWPWIPRNIDGTTEFVHTVSKLCPSAVGMKVRTVSGRPVRAVG DPDHPLSLGGISAVAAAEVQMLYSPARMKRPLRRAADGAYVAITWDEALAMLEEQLSAVKGSGDKLACLSGDDNGTINEV LSGLLAKAGSSNFFLMPGEAQPAQRAWELMGGQGQPGYDFENSDYVLGIGANILESWGPAIRHRHFFSVAHPHGEEPAVR YVYAGPVQNNTAAGADQWLPIKPGTEAVFALGLAHLLIKKGAVANVPDFGDFRAYTAEFTPAKVASLTGVDPKALSRVAD ELAAASRPLVVTGSEFDQGAGAATAMAGFAVNLLLGAASVKALPVADSAVQGAMSRARMLRQDFIAYLSRINAGKAPAPQ VLIVHEANPAYALPQADDMAKVMEKIPFKVSFSTFLDETAMMCDLVLPVPMGIERQDDVNTPYGCGQVTYCMAQQVIEPL VDARPAGDVLLSTAARLGMDLGHRSFESVLKAKAAAIGANYRKVSAGTPYVSKAALPLTGLALRPDVLKQTVSLSSPAEP FAIAPVHKLNIGTSNTATPPFNTKTIRRWELQGDEFYVMMNAATARKLGVKQHDAVSLSNKDGSIRARVNIFEGVMTDTV AVLLGFGHTAFDEFSKGKGANVMHLLTAGFEPVTGLSVWNRAGVNIAKA >Mature_688_residues ALDRRGFMKFVAGGTAGIMASPLPWKLLDDVSIWTQNWPWIPRNIDGTTEFVHTVSKLCPSAVGMKVRTVSGRPVRAVGD PDHPLSLGGISAVAAAEVQMLYSPARMKRPLRRAADGAYVAITWDEALAMLEEQLSAVKGSGDKLACLSGDDNGTINEVL SGLLAKAGSSNFFLMPGEAQPAQRAWELMGGQGQPGYDFENSDYVLGIGANILESWGPAIRHRHFFSVAHPHGEEPAVRY VYAGPVQNNTAAGADQWLPIKPGTEAVFALGLAHLLIKKGAVANVPDFGDFRAYTAEFTPAKVASLTGVDPKALSRVADE LAAASRPLVVTGSEFDQGAGAATAMAGFAVNLLLGAASVKALPVADSAVQGAMSRARMLRQDFIAYLSRINAGKAPAPQV LIVHEANPAYALPQADDMAKVMEKIPFKVSFSTFLDETAMMCDLVLPVPMGIERQDDVNTPYGCGQVTYCMAQQVIEPLV DARPAGDVLLSTAARLGMDLGHRSFESVLKAKAAAIGANYRKVSAGTPYVSKAALPLTGLALRPDVLKQTVSLSSPAEPF AIAPVHKLNIGTSNTATPPFNTKTIRRWELQGDEFYVMMNAATARKLGVKQHDAVSLSNKDGSIRARVNIFEGVMTDTVA VLLGFGHTAFDEFSKGKGANVMHLLTAGFEPVTGLSVWNRAGVNIAKA
Specific function: Oxidoreductase which produces hydrogen sulfide from thiosulfate (Potential) [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 73165; Mature: 73033
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDRRGFMKFVAGGTAGIMASPLPWKLLDDVSIWTQNWPWIPRNIDGTTEFVHTVSKLC CCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHC PSAVGMKVRTVSGRPVRAVGDPDHPLSLGGISAVAAAEVQMLYSPARMKRPLRRAADGAY HHHHCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCE VAITWDEALAMLEEQLSAVKGSGDKLACLSGDDNGTINEVLSGLLAKAGSSNFFLMPGEA EEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCC QPAQRAWELMGGQGQPGYDFENSDYVLGIGANILESWGPAIRHRHFFSVAHPHGEEPAVR CHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHCCHHHHHHHEEEECCCCCCCCCEE YVYAGPVQNNTAAGADQWLPIKPGTEAVFALGLAHLLIKKGAVANVPDFGDFRAYTAEFT EEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC PAKVASLTGVDPKALSRVADELAAASRPLVVTGSEFDQGAGAATAMAGFAVNLLLGAASV CHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC KALPVADSAVQGAMSRARMLRQDFIAYLSRINAGKAPAPQVLIVHEANPAYALPQADDMA EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHH KVMEKIPFKVSFSTFLDETAMMCDLVLPVPMGIERQDDVNTPYGCGQVTYCMAQQVIEPL HHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VDARPAGDVLLSTAARLGMDLGHRSFESVLKAKAAAIGANYRKVSAGTPYVSKAALPLTG HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCCCC LALRPDVLKQTVSLSSPAEPFAIAPVHKLNIGTSNTATPPFNTKTIRRWELQGDEFYVMM CCCCHHHHHHHHCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEE NAATARKLGVKQHDAVSLSNKDGSIRARVNIFEGVMTDTVAVLLGFGHTAFDEFSKGKGA ECCHHHHCCCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC NVMHLLTAGFEPVTGLSVWNRAGVNIAKA CEEEHHHCCCCCCCCHHHHHCCCCEEECC >Mature Secondary Structure ALDRRGFMKFVAGGTAGIMASPLPWKLLDDVSIWTQNWPWIPRNIDGTTEFVHTVSKLC CCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHC PSAVGMKVRTVSGRPVRAVGDPDHPLSLGGISAVAAAEVQMLYSPARMKRPLRRAADGAY HHHHCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCE VAITWDEALAMLEEQLSAVKGSGDKLACLSGDDNGTINEVLSGLLAKAGSSNFFLMPGEA EEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCC QPAQRAWELMGGQGQPGYDFENSDYVLGIGANILESWGPAIRHRHFFSVAHPHGEEPAVR CHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHCCHHHHHHHEEEECCCCCCCCCEE YVYAGPVQNNTAAGADQWLPIKPGTEAVFALGLAHLLIKKGAVANVPDFGDFRAYTAEFT EEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC PAKVASLTGVDPKALSRVADELAAASRPLVVTGSEFDQGAGAATAMAGFAVNLLLGAASV CHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC KALPVADSAVQGAMSRARMLRQDFIAYLSRINAGKAPAPQVLIVHEANPAYALPQADDMA EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHH KVMEKIPFKVSFSTFLDETAMMCDLVLPVPMGIERQDDVNTPYGCGQVTYCMAQQVIEPL HHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VDARPAGDVLLSTAARLGMDLGHRSFESVLKAKAAAIGANYRKVSAGTPYVSKAALPLTG HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCCCCC LALRPDVLKQTVSLSSPAEPFAIAPVHKLNIGTSNTATPPFNTKTIRRWELQGDEFYVMM CCCCHHHHHHHHCCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEE NAATARKLGVKQHDAVSLSNKDGSIRARVNIFEGVMTDTVAVLLGFGHTAFDEFSKGKGA ECCHHHHCCCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC NVMHLLTAGFEPVTGLSVWNRAGVNIAKA CEEEHHHCCCCCCCCHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751291; 11677609; 7737516 [H]