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The map label for this gene is lpsE [H]

Identifier: 78357931

GI number: 78357931

Start: 2877765

End: 2878934

Strand: Reverse

Name: lpsE [H]

Synonym: Dde_2890

Alternate gene names: 78357931

Gene position: 2878934-2877765 (Counterclockwise)

Preceding gene: 78357932

Following gene: 78357930

Centisome position: 77.18

GC content: 44.62

Gene sequence:

>1170_bases
TTGCCTTTGCTTTTACCTGTTGGGTCGCAAATACTTCGAAATAAAATGCGCAGTAAACCACGTATTCTTATAGCCCTAAG
CTCTGTCGGACTCGGAGGCGCTGAGCGTCAAGGGTTAATGTTCGCAGAATATTTAAAATGCAAGCACAGTTTTGATGTAT
TAGTCAGCACCTTTGGGGGCGAAGGAAAAGTATCTCTCTTGTGTAAAGAGACAGGGATACAGCATGTTAATATTGCTTAC
CCGCTTTTGGGGCATCGCTGGGAGGTGTGGTGGAAATTAATTAGCACAGCCTTGACCCTTCGTAAGATTAAGCCCGATTG
TATTGTTTCTTACTGTATGCCAGCTAACGCTGCCTGCGCCGCTGTTTGGAGGTTGACCGGGGCTCGGGCGTGCATTTGGG
GACAAAGAGACGCAGGTTTGCAAAAAGAGCTTCTTACACCAATTCCACTAGCACCAAGGCTGGCGACATGTTTTGTTTCC
AATTCGCCACATGGTGCAGCTTTTCTTGAAAATCAATTGGCTATTCCAAGGCATAAGATTTCTACTATTCCTAATGCGGT
AAAGCTTAATGTTGCACAGCTTTCTCGGACAGAGTGGAGAAGTAGGCTGAAAATTTCTCATGATGCTATGATTGTCACTA
TGGTTTCTAATCTGAGCTTTCGGAAAGATCATGAAACCCTGCTAAAAGCTTGGAGAATCGGTCTTGACAACCAGCTCTTT
CCTCAAAATACTAAACTAGTTTTATGTGGCAGAGACGATAGTAATGCTCCGGTTATCCGAAAATTGGCAGGCAAACTGCA
TTTAGACAATCATATACGTTTTGCCGGGGCTACAGACGATGTTGCAGGAATTTTAAATGCTTCTGATATCGCAGCGTTCT
CTTTTATATCAGAGGGGCTTCCTAACGTTGTTATTGAAAGTATGGCTGCAGGCCTCCCTGTAGTGGCAACAGATATTCCA
GGTGTACGAGCTGCAATAGGGAGTTGTGATGATAATATTCTCGTACCACCAAAAGACCCTGCTGCCATGGCGCATGGGAT
TGCAAAAATACTACAGGATCCTGCGCTCCGTTCCAGAGCAGCAGCTGCGAACATTACACAGGCAACTTCAACATTTGCCC
CTGATGTTGTCTTTTCTGCATTTGCCAAACTCATTTTGAGCAACATATAA

Upstream 100 bases:

>100_bases
TCTTATAAACGTGAACTCTCGGAACACTTAACTGTCTCAGATATTGAAAGAATGTTAACGGCCCATTCGCCTGCGTGCGA
TTATTCTGGGCCGCTTTGGC

Downstream 100 bases:

>100_bases
ATAAAAATATGAACTTAGCAAATATAACCATTGTTGTTTGTACATATAATCGCGCAGAGTTGCTTTGGGATTGCCTACAT
TCTTTGACGCAGCAGACAGT

Product: glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MPLLLPVGSQILRNKMRSKPRILIALSSVGLGGAERQGLMFAEYLKCKHSFDVLVSTFGGEGKVSLLCKETGIQHVNIAY
PLLGHRWEVWWKLISTALTLRKIKPDCIVSYCMPANAACAAVWRLTGARACIWGQRDAGLQKELLTPIPLAPRLATCFVS
NSPHGAAFLENQLAIPRHKISTIPNAVKLNVAQLSRTEWRSRLKISHDAMIVTMVSNLSFRKDHETLLKAWRIGLDNQLF
PQNTKLVLCGRDDSNAPVIRKLAGKLHLDNHIRFAGATDDVAGILNASDIAAFSFISEGLPNVVIESMAAGLPVVATDIP
GVRAAIGSCDDNILVPPKDPAAMAHGIAKILQDPALRSRAAAANITQATSTFAPDVVFSAFAKLILSNI

Sequences:

>Translated_389_residues
MPLLLPVGSQILRNKMRSKPRILIALSSVGLGGAERQGLMFAEYLKCKHSFDVLVSTFGGEGKVSLLCKETGIQHVNIAY
PLLGHRWEVWWKLISTALTLRKIKPDCIVSYCMPANAACAAVWRLTGARACIWGQRDAGLQKELLTPIPLAPRLATCFVS
NSPHGAAFLENQLAIPRHKISTIPNAVKLNVAQLSRTEWRSRLKISHDAMIVTMVSNLSFRKDHETLLKAWRIGLDNQLF
PQNTKLVLCGRDDSNAPVIRKLAGKLHLDNHIRFAGATDDVAGILNASDIAAFSFISEGLPNVVIESMAAGLPVVATDIP
GVRAAIGSCDDNILVPPKDPAAMAHGIAKILQDPALRSRAAAANITQATSTFAPDVVFSAFAKLILSNI
>Mature_388_residues
PLLLPVGSQILRNKMRSKPRILIALSSVGLGGAERQGLMFAEYLKCKHSFDVLVSTFGGEGKVSLLCKETGIQHVNIAYP
LLGHRWEVWWKLISTALTLRKIKPDCIVSYCMPANAACAAVWRLTGARACIWGQRDAGLQKELLTPIPLAPRLATCFVSN
SPHGAAFLENQLAIPRHKISTIPNAVKLNVAQLSRTEWRSRLKISHDAMIVTMVSNLSFRKDHETLLKAWRIGLDNQLFP
QNTKLVLCGRDDSNAPVIRKLAGKLHLDNHIRFAGATDDVAGILNASDIAAFSFISEGLPNVVIESMAAGLPVVATDIPG
VRAAIGSCDDNILVPPKDPAAMAHGIAKILQDPALRSRAAAANITQATSTFAPDVVFSAFAKLILSNI

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 42109; Mature: 41978

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00264 NEUROHYPOPHYS_HORM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLLPVGSQILRNKMRSKPRILIALSSVGLGGAERQGLMFAEYLKCKHSFDVLVSTFGG
CCEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHEECCC
EGKVSLLCKETGIQHVNIAYPLLGHRWEVWWKLISTALTLRKIKPDCIVSYCMPANAACA
CCEEEEEEECCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCHHHH
AVWRLTGARACIWGQRDAGLQKELLTPIPLAPRLATCFVSNSPHGAAFLENQLAIPRHKI
HHHHHCCCCEEEECCCCCCCHHHHCCCCCCCCHHHEEEECCCCCCHHHHHCCCCCCHHHH
STIPNAVKLNVAQLSRTEWRSRLKISHDAMIVTMVSNLSFRKDHETLLKAWRIGLDNQLF
HCCCCHHEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCC
PQNTKLVLCGRDDSNAPVIRKLAGKLHLDNHIRFAGATDDVAGILNASDIAAFSFISEGL
CCCCEEEEECCCCCCCHHHHHHHHHCEECCCEEEECCCCHHHHHCCHHHHHHHHHHHCCC
PNVVIESMAAGLPVVATDIPGVRAAIGSCDDNILVPPKDPAAMAHGIAKILQDPALRSRA
HHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCHHHHHHH
AAANITQATSTFAPDVVFSAFAKLILSNI
HHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLLLPVGSQILRNKMRSKPRILIALSSVGLGGAERQGLMFAEYLKCKHSFDVLVSTFGG
CEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHEECCC
EGKVSLLCKETGIQHVNIAYPLLGHRWEVWWKLISTALTLRKIKPDCIVSYCMPANAACA
CCEEEEEEECCCCCEEEEECHHHCCHHHHHHHHHHHHHHHHHCCHHHHEEECCCCCHHHH
AVWRLTGARACIWGQRDAGLQKELLTPIPLAPRLATCFVSNSPHGAAFLENQLAIPRHKI
HHHHHCCCCEEEECCCCCCCHHHHCCCCCCCCHHHEEEECCCCCCHHHHHCCCCCCHHHH
STIPNAVKLNVAQLSRTEWRSRLKISHDAMIVTMVSNLSFRKDHETLLKAWRIGLDNQLF
HCCCCHHEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCC
PQNTKLVLCGRDDSNAPVIRKLAGKLHLDNHIRFAGATDDVAGILNASDIAAFSFISEGL
CCCCEEEEECCCCCCCHHHHHHHHHCEECCCEEEECCCCHHHHHCCHHHHHHHHHHHCCC
PNVVIESMAAGLPVVATDIPGVRAAIGSCDDNILVPPKDPAAMAHGIAKILQDPALRSRA
HHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCHHHHHHH
AAANITQATSTFAPDVVFSAFAKLILSNI
HHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]