Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78357899

Identifier: 78357899

GI number: 78357899

Start: 2847139

End: 2847600

Strand: Reverse

Name: 78357899

Synonym: Dde_2858

Alternate gene names: NA

Gene position: 2847600-2847139 (Counterclockwise)

Preceding gene: 78357901

Following gene: 78357898

Centisome position: 76.34

GC content: 55.84

Gene sequence:

>462_bases
ATGAAGAAGGGCTTTGTACCTGTGGCCTTGCTGGCGCTGATTGCGGTGTGCGGTCTGTGCATTGTGCAGCAGGCTGTGGC
GGGTGCGTATGTCGGGTCGGCGCGTTGCGGAGAATGCCACGAAACGGAATATGAAACGTTTCAGAAACACTCTGTAAAGG
CTAAGTCATGGAAAAGTGTGTCCATTATGGCGTCAGATCTTACGCCGCAGGAGCTTGAGGGCTGCTACGACTGTCATACA
ACAGGGCACGGTAAAGGCGGTTTTGTAAGCATTGAAACCACACCGGAACTGGCCGACGTGGGGTGCGAGACATGCCACGG
TCCCGGAGCGCAGCACGCGGAAACAGGCGATCCGGAAATGATAACCCGTAAGCCGGACATCAAAACCTGTGAAACGTGCC
ACAACGAAAGCCGCGTACAGGCATTCGGGTACAAGCCGCTGATTTCCAGCGGTGCCCACTAG

Upstream 100 bases:

>100_bases
ACTGAAGGCATTCCGGCAGTTTCCGGTCAAAGGGGTTCGTTTGAGTGGACAATCGGGAAACGGCGGGGAAGGAATGCGTT
GCGGGTAAGCAGGAGGAACC

Downstream 100 bases:

>100_bases
GAGGTCTGTATGCTGCATTTCATCCGTAAATCCATAGGACTGAAGACGCTTACACTTATTGCCGGCATATCCGTTGTCGT
GTTCACCATACTTATAGGTG

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSVSIMASDLTPQELEGCYDCHT
TGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEMITRKPDIKTCETCHNESRVQAFGYKPLISSGAH

Sequences:

>Translated_153_residues
MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSVSIMASDLTPQELEGCYDCHT
TGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEMITRKPDIKTCETCHNESRVQAFGYKPLISSGAH
>Mature_153_residues
MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSVSIMASDLTPQELEGCYDCHT
TGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEMITRKPDIKTCETCHNESRVQAFGYKPLISSGAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16315; Mature: 16315

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE
SIMASDLTPQELEGCYDCHTTGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEM
EEEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCE
ITRKPDIKTCETCHNESRVQAFGYKPLISSGAH
EECCCCCCHHHHHCCCCCEECCCCCHHHCCCCC
>Mature Secondary Structure
MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE
SIMASDLTPQELEGCYDCHTTGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEM
EEEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCE
ITRKPDIKTCETCHNESRVQAFGYKPLISSGAH
EECCCCCCHHHHHCCCCCEECCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA