| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357899
Identifier: 78357899
GI number: 78357899
Start: 2847139
End: 2847600
Strand: Reverse
Name: 78357899
Synonym: Dde_2858
Alternate gene names: NA
Gene position: 2847600-2847139 (Counterclockwise)
Preceding gene: 78357901
Following gene: 78357898
Centisome position: 76.34
GC content: 55.84
Gene sequence:
>462_bases ATGAAGAAGGGCTTTGTACCTGTGGCCTTGCTGGCGCTGATTGCGGTGTGCGGTCTGTGCATTGTGCAGCAGGCTGTGGC GGGTGCGTATGTCGGGTCGGCGCGTTGCGGAGAATGCCACGAAACGGAATATGAAACGTTTCAGAAACACTCTGTAAAGG CTAAGTCATGGAAAAGTGTGTCCATTATGGCGTCAGATCTTACGCCGCAGGAGCTTGAGGGCTGCTACGACTGTCATACA ACAGGGCACGGTAAAGGCGGTTTTGTAAGCATTGAAACCACACCGGAACTGGCCGACGTGGGGTGCGAGACATGCCACGG TCCCGGAGCGCAGCACGCGGAAACAGGCGATCCGGAAATGATAACCCGTAAGCCGGACATCAAAACCTGTGAAACGTGCC ACAACGAAAGCCGCGTACAGGCATTCGGGTACAAGCCGCTGATTTCCAGCGGTGCCCACTAG
Upstream 100 bases:
>100_bases ACTGAAGGCATTCCGGCAGTTTCCGGTCAAAGGGGTTCGTTTGAGTGGACAATCGGGAAACGGCGGGGAAGGAATGCGTT GCGGGTAAGCAGGAGGAACC
Downstream 100 bases:
>100_bases GAGGTCTGTATGCTGCATTTCATCCGTAAATCCATAGGACTGAAGACGCTTACACTTATTGCCGGCATATCCGTTGTCGT GTTCACCATACTTATAGGTG
Product: cytochrome c family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSVSIMASDLTPQELEGCYDCHT TGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEMITRKPDIKTCETCHNESRVQAFGYKPLISSGAH
Sequences:
>Translated_153_residues MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSVSIMASDLTPQELEGCYDCHT TGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEMITRKPDIKTCETCHNESRVQAFGYKPLISSGAH >Mature_153_residues MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSVSIMASDLTPQELEGCYDCHT TGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEMITRKPDIKTCETCHNESRVQAFGYKPLISSGAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16315; Mature: 16315
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE SIMASDLTPQELEGCYDCHTTGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEM EEEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCE ITRKPDIKTCETCHNESRVQAFGYKPLISSGAH EECCCCCCHHHHHCCCCCEECCCCCHHHCCCCC >Mature Secondary Structure MKKGFVPVALLALIAVCGLCIVQQAVAGAYVGSARCGECHETEYETFQKHSVKAKSWKSV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE SIMASDLTPQELEGCYDCHTTGHGKGGFVSIETTPELADVGCETCHGPGAQHAETGDPEM EEEECCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCE ITRKPDIKTCETCHNESRVQAFGYKPLISSGAH EECCCCCCHHHHHCCCCCEECCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA