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The map label for this gene is dcrA [H]

Identifier: 78357898

GI number: 78357898

Start: 2845105

End: 2847129

Strand: Reverse

Name: dcrA [H]

Synonym: Dde_2857

Alternate gene names: 78357898

Gene position: 2847129-2845105 (Counterclockwise)

Preceding gene: 78357899

Following gene: 78357896

Centisome position: 76.33

GC content: 57.14

Gene sequence:

>2025_bases
ATGCTGCATTTCATCCGTAAATCCATAGGACTGAAGACGCTTACACTTATTGCCGGCATATCCGTTGTCGTGTTCACCAT
ACTTATAGGTGTGACCACCCAGCGTCAGTATGACGGCATGCTGGGGCAGATGGACACCGCACTCACGCGGGTTTCTGAGC
TTATCAAACTGGCAACTGACGGTCCCATGCTGGTGGGCGATGATGACGGTACAAAGGCTCAGTTCGCTCTGCTGGCAAAA
CGGTATCCCGATACGCAGGTGTATATAACAAATTTTAAAAACAATATTACCTACAGCACGCGTACGGGCACAGTCCGCAA
GGATGTGGAAGATGTTTTTTCCGACCCTTCGGTGCTGGCGCTTACCGAAAAGGCAGTGAAAACAGACGTGCACGAGGGAT
TGCTGCTCAAGGAGGGCGGAAAATCCTTCATGCTCCGCAGTACCAGCATTCCCAACGACGATTCGTGCCACCACTGTCAT
GGTTCGTCTCAGCCCATTCTGGGGCAGCTTGTGGTGGTCAAGGATGTCACCCCCATGGTCGCGGGTATCCATCGTCAGGT
GCTTGAGACGGTGGCGTTTTCTGTGGGCGGACTGGCAACGCTAATCTGCATCGTGTTCTTTTTTCTGCGCAAGACAGTTA
TCAAGCCCGTACAGGAGATCACCGAGGCCAGCCACAGAATCGCCCACGGCGAGCTGGAGACGCAGTTCACTGTCCATTCG
CAGGACGAACTGGGCAAGCTGGAGAGCAATCTCGGCGAGATGGTGGGCAAGCTCAAGGAGCAGCTGGGCTTTTCGCGCGG
GATACTGCAGGGCATGACCACGCCGTTTCTGGTTACGGATACGGAAGGCAATGTGACTTTCACCAATAAAGGCATGGTGG
ACTGTCTGTGCGAACTGGGTGATCCTGACCAGCATGTGGGCAAAACCGTTGGAGAGTTTTTCTATAACGACGTGAGCCGC
GAAACGCTTACCCACAAGGTGCTTGCCAACCGCAAGGCCATTACCGGCGTGGAGGTGGAATTTACCGACCGCGACGGTGA
AACCCGCTACAGTGTGCTTGACAGCTCGCCCATATATGATCTGGACGGCAACCTGATGGGAGCCTTTACCGTTTGTACTG
ACATGACGGAATTCCGCCGCCAGCAGCGTCTGGTGGAAGAGCAGAATTCGCGCATCACCCGCGCGGCGGAAGCTGCGGGA
GCCATCGCCGTACAGGTGTCTTCAGCTTCCGAGGAGCTTTCGGCGCAGGTGGAGCAGTCCAGTTCCGGCGCGGAAGAGCA
GCGCAGCCTTACTGCCGAAGGGGCCACAGCCATGGAGCAGATGAACGCCACTGTCACCGAGGTGGCGCGGAATGCTTCCA
ATGCGGCCGAAATGGCGGGAAAAGCACAGGACGTGGCCAAGAACGGGGTTTCCGTGGTGGAAGATACCGTGCGCCACATC
AACGATGTTGCACGACAGGCTGAAAGTCTGAAAACGGAAATGGGCGGACTGGCGGACAAGGCGGAAGGCATAGGCGAGAT
TATCAACGTGATTGAAGATATTGCCGACCAGACCAACCTGCTGGCCCTCAACGCCGCCATAGAGGCTGCGCGCGCGGGCG
ATGCCGGACGCGGGTTTGCCGTGGTGGCCGATGAAGTGCGCAAGCTGGCGGAAAAAACCATGAGTGCCACCCGTCAGGTC
GTGGATTATGTGGGGTCCATTCAGGAAAGCACCCGCAGAAATATGGCTGCCACGGAAGAGGCGGTGAAGCTGGTGGAGCA
GTCCACGGCCATGGCCGGAGAATCGGGCCGTACCCTGCATTCCATCGTCCAGATGGTGGTGGAGACGGCGGATCAGGTGC
GTGCCATTGCCACCGCCGCCGAAGAACAGTCTGCCGCCAGCGAGCAGATAAACCGCTCCATGGAGCAGATAAGCCGCATT
TCTTCGGAAACGGCCGATGCCATGAACCAGTCGGCACAGGCGGTTTCAGACCTTGCGCGGCTGGCTGTGGATCTTAACGC
CATTATTACCGACATGCGGCGCTGA

Upstream 100 bases:

>100_bases
GCCGGACATCAAAACCTGTGAAACGTGCCACAACGAAAGCCGCGTACAGGCATTCGGGTACAAGCCGCTGATTTCCAGCG
GTGCCCACTAGGAGGTCTGT

Downstream 100 bases:

>100_bases
CCGCCGCCCGATGTATGAAAAAACAAAAAAAGCCGGAGCAATACGCTCCGGCTTTTTGTTTTTGTGGCGGCGGGTGCCGG
CTGCCGGAGAAACCGGAGGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MLHFIRKSIGLKTLTLIAGISVVVFTILIGVTTQRQYDGMLGQMDTALTRVSELIKLATDGPMLVGDDDGTKAQFALLAK
RYPDTQVYITNFKNNITYSTRTGTVRKDVEDVFSDPSVLALTEKAVKTDVHEGLLLKEGGKSFMLRSTSIPNDDSCHHCH
GSSQPILGQLVVVKDVTPMVAGIHRQVLETVAFSVGGLATLICIVFFFLRKTVIKPVQEITEASHRIAHGELETQFTVHS
QDELGKLESNLGEMVGKLKEQLGFSRGILQGMTTPFLVTDTEGNVTFTNKGMVDCLCELGDPDQHVGKTVGEFFYNDVSR
ETLTHKVLANRKAITGVEVEFTDRDGETRYSVLDSSPIYDLDGNLMGAFTVCTDMTEFRRQQRLVEEQNSRITRAAEAAG
AIAVQVSSASEELSAQVEQSSSGAEEQRSLTAEGATAMEQMNATVTEVARNASNAAEMAGKAQDVAKNGVSVVEDTVRHI
NDVARQAESLKTEMGGLADKAEGIGEIINVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATRQV
VDYVGSIQESTRRNMAATEEAVKLVEQSTAMAGESGRTLHSIVQMVVETADQVRAIATAAEEQSAASEQINRSMEQISRI
SSETADAMNQSAQAVSDLARLAVDLNAIITDMRR

Sequences:

>Translated_674_residues
MLHFIRKSIGLKTLTLIAGISVVVFTILIGVTTQRQYDGMLGQMDTALTRVSELIKLATDGPMLVGDDDGTKAQFALLAK
RYPDTQVYITNFKNNITYSTRTGTVRKDVEDVFSDPSVLALTEKAVKTDVHEGLLLKEGGKSFMLRSTSIPNDDSCHHCH
GSSQPILGQLVVVKDVTPMVAGIHRQVLETVAFSVGGLATLICIVFFFLRKTVIKPVQEITEASHRIAHGELETQFTVHS
QDELGKLESNLGEMVGKLKEQLGFSRGILQGMTTPFLVTDTEGNVTFTNKGMVDCLCELGDPDQHVGKTVGEFFYNDVSR
ETLTHKVLANRKAITGVEVEFTDRDGETRYSVLDSSPIYDLDGNLMGAFTVCTDMTEFRRQQRLVEEQNSRITRAAEAAG
AIAVQVSSASEELSAQVEQSSSGAEEQRSLTAEGATAMEQMNATVTEVARNASNAAEMAGKAQDVAKNGVSVVEDTVRHI
NDVARQAESLKTEMGGLADKAEGIGEIINVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATRQV
VDYVGSIQESTRRNMAATEEAVKLVEQSTAMAGESGRTLHSIVQMVVETADQVRAIATAAEEQSAASEQINRSMEQISRI
SSETADAMNQSAQAVSDLARLAVDLNAIITDMRR
>Mature_674_residues
MLHFIRKSIGLKTLTLIAGISVVVFTILIGVTTQRQYDGMLGQMDTALTRVSELIKLATDGPMLVGDDDGTKAQFALLAK
RYPDTQVYITNFKNNITYSTRTGTVRKDVEDVFSDPSVLALTEKAVKTDVHEGLLLKEGGKSFMLRSTSIPNDDSCHHCH
GSSQPILGQLVVVKDVTPMVAGIHRQVLETVAFSVGGLATLICIVFFFLRKTVIKPVQEITEASHRIAHGELETQFTVHS
QDELGKLESNLGEMVGKLKEQLGFSRGILQGMTTPFLVTDTEGNVTFTNKGMVDCLCELGDPDQHVGKTVGEFFYNDVSR
ETLTHKVLANRKAITGVEVEFTDRDGETRYSVLDSSPIYDLDGNLMGAFTVCTDMTEFRRQQRLVEEQNSRITRAAEAAG
AIAVQVSSASEELSAQVEQSSSGAEEQRSLTAEGATAMEQMNATVTEVARNASNAAEMAGKAQDVAKNGVSVVEDTVRHI
NDVARQAESLKTEMGGLADKAEGIGEIINVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATRQV
VDYVGSIQESTRRNMAATEEAVKLVEQSTAMAGESGRTLHSIVQMVVETADQVRAIATAAEEQSAASEQINRSMEQISRI
SSETADAMNQSAQAVSDLARLAVDLNAIITDMRR

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=35, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI1788194, Length=247, Percent_Identity=35.2226720647773, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI2367378, Length=241, Percent_Identity=33.195020746888, Blast_Score=119, Evalue=9e-28,
Organism=Escherichia coli, GI1787690, Length=269, Percent_Identity=32.7137546468402, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1789453, Length=216, Percent_Identity=31.9444444444444, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 72850; Mature: 72850

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50885 HAMP ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHFIRKSIGLKTLTLIAGISVVVFTILIGVTTQRQYDGMLGQMDTALTRVSELIKLATD
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC
GPMLVGDDDGTKAQFALLAKRYPDTQVYITNFKNNITYSTRTGTVRKDVEDVFSDPSVLA
CCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHCCCCEEE
LTEKAVKTDVHEGLLLKEGGKSFMLRSTSIPNDDSCHHCHGSSQPILGQLVVVKDVTPMV
HHHHHHHHHHHCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHH
AGIHRQVLETVAFSVGGLATLICIVFFFLRKTVIKPVQEITEASHRIAHGELETQFTVHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
QDELGKLESNLGEMVGKLKEQLGFSRGILQGMTTPFLVTDTEGNVTFTNKGMVDCLCELG
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEECCCCCEEEECCCHHHHHHHCC
DPDQHVGKTVGEFFYNDVSRETLTHKVLANRKAITGVEVEFTDRDGETRYSVLDSSPIYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCEE
LDGNLMGAFTVCTDMTEFRRQQRLVEEQNSRITRAAEAAGAIAVQVSSASEELSAQVEQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHC
SSGAEEQRSLTAEGATAMEQMNATVTEVARNASNAAEMAGKAQDVAKNGVSVVEDTVRHI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
NDVARQAESLKTEMGGLADKAEGIGEIINVIEDIADQTNLLALNAAIEAARAGDAGRGFA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHH
VVADEVRKLAEKTMSATRQVVDYVGSIQESTRRNMAATEEAVKLVEQSTAMAGESGRTLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SIVQMVVETADQVRAIATAAEEQSAASEQINRSMEQISRISSETADAMNQSAQAVSDLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVDLNAIITDMRR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLHFIRKSIGLKTLTLIAGISVVVFTILIGVTTQRQYDGMLGQMDTALTRVSELIKLATD
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC
GPMLVGDDDGTKAQFALLAKRYPDTQVYITNFKNNITYSTRTGTVRKDVEDVFSDPSVLA
CCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHCCCCEEE
LTEKAVKTDVHEGLLLKEGGKSFMLRSTSIPNDDSCHHCHGSSQPILGQLVVVKDVTPMV
HHHHHHHHHHHCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHEEEEEHHHHHHH
AGIHRQVLETVAFSVGGLATLICIVFFFLRKTVIKPVQEITEASHRIAHGELETQFTVHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
QDELGKLESNLGEMVGKLKEQLGFSRGILQGMTTPFLVTDTEGNVTFTNKGMVDCLCELG
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEECCCCCEEEECCCHHHHHHHCC
DPDQHVGKTVGEFFYNDVSRETLTHKVLANRKAITGVEVEFTDRDGETRYSVLDSSPIYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCEE
LDGNLMGAFTVCTDMTEFRRQQRLVEEQNSRITRAAEAAGAIAVQVSSASEELSAQVEQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHC
SSGAEEQRSLTAEGATAMEQMNATVTEVARNASNAAEMAGKAQDVAKNGVSVVEDTVRHI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
NDVARQAESLKTEMGGLADKAEGIGEIINVIEDIADQTNLLALNAAIEAARAGDAGRGFA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHH
VVADEVRKLAEKTMSATRQVVDYVGSIQESTRRNMAATEEAVKLVEQSTAMAGESGRTLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
SIVQMVVETADQVRAIATAAEEQSAASEQINRSMEQISRISSETADAMNQSAQAVSDLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVDLNAIITDMRR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]