Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is yyaL [H]

Identifier: 78357889

GI number: 78357889

Start: 2834390

End: 2835535

Strand: Direct

Name: yyaL [H]

Synonym: Dde_2848

Alternate gene names: 78357889

Gene position: 2834390-2835535 (Clockwise)

Preceding gene: 78357887

Following gene: 78357891

Centisome position: 75.98

GC content: 60.12

Gene sequence:

>1146_bases
ATGACAGCACAGCGCCCCAACCGGTTGATCAACGAGTCCAGCCCCTATCTGCTGCAACACGCCCGCAATCCCGTGGACTG
GCATCCCTGGGGTGAAGAAGCTTTTGCGCTGGCCCGCAGCGAAGATAAACCCGTATTTCTTTCCATCGGCTATTCCACAT
GCCACTGGTGTCATGTGATGGCGCACGAATCCTTTGAGGATGAAGCCGTAGCCGCTCTGCTTAACGAAGCTTTCATCAAC
GTCAAGGTCGACCGCGAAGACCGTCCCGACATAGACAGCATATATATGGCAGCCTGTCAGATGCTTACCGGCTCCGGCGG
ATGGCCCCTGACCATTGTCATGACGCCGGACGGCAGGCCGTTTTTTGCCGCCACCTACATTCCGCGCCTTTCCCGCGGCG
GACGCACCGGCATGCTTGAGCTGGTGCCGCGCATCCGCGACATATGGCGCAAACAACGCGCCGATGTCACCGCATCGGCA
GACTCTGTGGCGGAACACATGCGACGGCATGCAGAAGGACTGCTGCGCCCTTCCAGCGGCGGGGCGCCTGACGACACCAC
CGTGCGGCAGGCAGTGGATACCCTGTGCCAGAGATATGACGCCCGCCACGGCGGGTTCGGATCCGCGCCCAAATTTCCTG
CGCCGCATTCGCTGCTACTGCTGCTGCGCCACGCGCACCGCACACAGGATGCCGCCCGGCGCGCACAGCTGACCGGCATG
GTTTCCCATACACTCGAAGCCATGCGGCTCGGGGGTATTTTTGACCATGCGGGCTATGGCTTTCATCGCTACAGCACCGA
CAAGGAATGGCTGCTGCCGCATTTTGAAAAAATGCTCTACGATCAGGCCATGCATGTGCTGGCCTATACCCGCGGCTGGC
AGCTGACGGGCAGACCTCTGTTCAGGCGCACCGCAGAAGAAATAATGATGTATGTGATGCGCGACCTGACCTCGCCTCAG
GGAGCCTTTTACGCCGCGGAAGATGCCGACAGCGACGCGCCCCCTCATTTTGCCGCCATGGGGCTGCCGCACAGAGGCGA
AGGTTTTTTCTACCTTTTCACGCTGCAGGAAATCCGCGGACTGCTTTCCCGGGAAGACGCGCTGCTGGCGGAAAAGATAT
GGAACCTGCAGGAAGAAGGTAATTAG

Upstream 100 bases:

>100_bases
CGCCCTGCGCGGGGATGATTTTTGCATGCACCAGTGACACAGGCAGAATAATCCGGTTAATGCTTTTCACGCACAGCGAA
GACGCCAAAGGGAGTGCCCG

Downstream 100 bases:

>100_bases
TCAGTCCTGAAAAACTCTAAAAACGGCCTGTCAGGCGCAAGCCCGTACCGGCCGAACATTGGGTCGGAAAATGTGCCACA
GCAATTTGGGGCACAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTAQRPNRLINESSPYLLQHARNPVDWHPWGEEAFALARSEDKPVFLSIGYSTCHWCHVMAHESFEDEAVAALLNEAFIN
VKVDREDRPDIDSIYMAACQMLTGSGGWPLTIVMTPDGRPFFAATYIPRLSRGGRTGMLELVPRIRDIWRKQRADVTASA
DSVAEHMRRHAEGLLRPSSGGAPDDTTVRQAVDTLCQRYDARHGGFGSAPKFPAPHSLLLLLRHAHRTQDAARRAQLTGM
VSHTLEAMRLGGIFDHAGYGFHRYSTDKEWLLPHFEKMLYDQAMHVLAYTRGWQLTGRPLFRRTAEEIMMYVMRDLTSPQ
GAFYAAEDADSDAPPHFAAMGLPHRGEGFFYLFTLQEIRGLLSREDALLAEKIWNLQEEGN

Sequences:

>Translated_381_residues
MTAQRPNRLINESSPYLLQHARNPVDWHPWGEEAFALARSEDKPVFLSIGYSTCHWCHVMAHESFEDEAVAALLNEAFIN
VKVDREDRPDIDSIYMAACQMLTGSGGWPLTIVMTPDGRPFFAATYIPRLSRGGRTGMLELVPRIRDIWRKQRADVTASA
DSVAEHMRRHAEGLLRPSSGGAPDDTTVRQAVDTLCQRYDARHGGFGSAPKFPAPHSLLLLLRHAHRTQDAARRAQLTGM
VSHTLEAMRLGGIFDHAGYGFHRYSTDKEWLLPHFEKMLYDQAMHVLAYTRGWQLTGRPLFRRTAEEIMMYVMRDLTSPQ
GAFYAAEDADSDAPPHFAAMGLPHRGEGFFYLFTLQEIRGLLSREDALLAEKIWNLQEEGN
>Mature_380_residues
TAQRPNRLINESSPYLLQHARNPVDWHPWGEEAFALARSEDKPVFLSIGYSTCHWCHVMAHESFEDEAVAALLNEAFINV
KVDREDRPDIDSIYMAACQMLTGSGGWPLTIVMTPDGRPFFAATYIPRLSRGGRTGMLELVPRIRDIWRKQRADVTASAD
SVAEHMRRHAEGLLRPSSGGAPDDTTVRQAVDTLCQRYDARHGGFGSAPKFPAPHSLLLLLRHAHRTQDAARRAQLTGMV
SHTLEAMRLGGIFDHAGYGFHRYSTDKEWLLPHFEKMLYDQAMHVLAYTRGWQLTGRPLFRRTAEEIMMYVMRDLTSPQG
AFYAAEDADSDAPPHFAAMGLPHRGEGFFYLFTLQEIRGLLSREDALLAEKIWNLQEEGN

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5 [H]

Homologues:

Organism=Homo sapiens, GI31542723, Length=369, Percent_Identity=45.7994579945799, Blast_Score=330, Evalue=9e-91,
Organism=Caenorhabditis elegans, GI25147430, Length=367, Percent_Identity=42.5068119891008, Blast_Score=296, Evalue=1e-80,
Organism=Drosophila melanogaster, GI20129985, Length=360, Percent_Identity=44.1666666666667, Blast_Score=307, Evalue=7e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]

EC number: NA

Molecular weight: Translated: 43091; Mature: 42960

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQRPNRLINESSPYLLQHARNPVDWHPWGEEAFALARSEDKPVFLSIGYSTCHWCHVM
CCCCCCCHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHH
AHESFEDEAVAALLNEAFINVKVDREDRPDIDSIYMAACQMLTGSGGWPLTIVMTPDGRP
HHCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
FFAATYIPRLSRGGRTGMLELVPRIRDIWRKQRADVTASADSVAEHMRRHAEGLLRPSSG
EEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
GAPDDTTVRQAVDTLCQRYDARHGGFGSAPKFPAPHSLLLLLRHAHRTQDAARRAQLTGM
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSHTLEAMRLGGIFDHAGYGFHRYSTDKEWLLPHFEKMLYDQAMHVLAYTRGWQLTGRPL
HHHHHHHHHHCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
FRRTAEEIMMYVMRDLTSPQGAFYAAEDADSDAPPHFAAMGLPHRGEGFFYLFTLQEIRG
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEEHHHHHH
LLSREDALLAEKIWNLQEEGN
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAQRPNRLINESSPYLLQHARNPVDWHPWGEEAFALARSEDKPVFLSIGYSTCHWCHVM
CCCCCCHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHH
AHESFEDEAVAALLNEAFINVKVDREDRPDIDSIYMAACQMLTGSGGWPLTIVMTPDGRP
HHCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
FFAATYIPRLSRGGRTGMLELVPRIRDIWRKQRADVTASADSVAEHMRRHAEGLLRPSSG
EEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
GAPDDTTVRQAVDTLCQRYDARHGGFGSAPKFPAPHSLLLLLRHAHRTQDAARRAQLTGM
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VSHTLEAMRLGGIFDHAGYGFHRYSTDKEWLLPHFEKMLYDQAMHVLAYTRGWQLTGRPL
HHHHHHHHHHCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
FRRTAEEIMMYVMRDLTSPQGAFYAAEDADSDAPPHFAAMGLPHRGEGFFYLFTLQEIRG
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEEHHHHHH
LLSREDALLAEKIWNLQEEGN
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]