| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357838
Identifier: 78357838
GI number: 78357838
Start: 2788572
End: 2789405
Strand: Direct
Name: 78357838
Synonym: Dde_2796
Alternate gene names: NA
Gene position: 2788572-2789405 (Clockwise)
Preceding gene: 78357837
Following gene: 78357840
Centisome position: 74.76
GC content: 53.6
Gene sequence:
>834_bases ATGACTAAAGAAACCCTCATCCCTGTCCGTCATGAAGAAGTCGCTGTCTGCGGTGAATACATCCTTGCCGCTGTCACCGA GGATGGCAAGGCGTACTTCTCGCCGCGCCATGTGTGTGATGCGCTTGGTATCGCGTGGACAGGACAGCGTGTGAAGATCA TGGACGATGATGTGCTGAAATTAGTCGTGAAGGAAATCTTCACAACTGGACGTGACGGCAAGACCTACAAGATGTCCATG CTCCCCATCGAGTTCGCCAATGGTTGGCTGTTCACGATCAAGAAGGTTCGCCCCGAACTCCAGGCCAAGCTGAACCTGTT CCGCGCTGAAGCCTACCATGCTCTGGACCTGTGGTTCAGAAAGGGACTTCGGTATGAAGAAGATTCACTCGAAGCCCTTG GATTGCCTGATTTCGAAAGCCCTGCTGAAGCTGCAAGAGCGTGGGCAGAAGAACGTGAACAGCGCATAGAACTGGAAGCG GAAAATGCCACACTGAGACCCAAGGCCAAGGTCTATGAAACCTGCTTCGCCGATCGGCAGATGAGCGTTGTCCAGTTCGC GAGGACGCTCCACGGCGTAAACAGCATGAAGGTCAAGGAAGACCTGATGAGAGCAGGATACCTGCGGCGTTCCGGTGGCG TGTACAGGGTGCGCGGCAAGTTCAGAGACAAGTTCTTCGCAGAGCGCATTAGCCCATTCAGAGGCTTTGTGACCATCATT GCCCTTGATGGTGGCAAAGAGAAGATGGTTGAGCTGTATCTCGATGGCAAGCTGACCATGCGAAGAGGTTTCGAGCATGC GCACGAGCGATTCTTTGACGAACTTGACTTCTAG
Upstream 100 bases:
>100_bases GTGGAAACACTTAGGAAAAACCCAAACATGAAGGCTGGTTGAGAGAAATCTCACCAGCCTTTTCTTATTTCAAACATTCC ATTCAAGAGGAGAATTTAAG
Downstream 100 bases:
>100_bases AGAAATCACTCAAATTTGCCGTATAACGAATGAAAAGAGCCGGATAAAGCCTTTGCCCTGTCCGGCTCTTTTTTCGTTCT TAGCAGGCGAAATTCACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTKETLIPVRHEEVAVCGEYILAAVTEDGKAYFSPRHVCDALGIAWTGQRVKIMDDDVLKLVVKEIFTTGRDGKTYKMSM LPIEFANGWLFTIKKVRPELQAKLNLFRAEAYHALDLWFRKGLRYEEDSLEALGLPDFESPAEAARAWAEEREQRIELEA ENATLRPKAKVYETCFADRQMSVVQFARTLHGVNSMKVKEDLMRAGYLRRSGGVYRVRGKFRDKFFAERISPFRGFVTII ALDGGKEKMVELYLDGKLTMRRGFEHAHERFFDELDF
Sequences:
>Translated_277_residues MTKETLIPVRHEEVAVCGEYILAAVTEDGKAYFSPRHVCDALGIAWTGQRVKIMDDDVLKLVVKEIFTTGRDGKTYKMSM LPIEFANGWLFTIKKVRPELQAKLNLFRAEAYHALDLWFRKGLRYEEDSLEALGLPDFESPAEAARAWAEEREQRIELEA ENATLRPKAKVYETCFADRQMSVVQFARTLHGVNSMKVKEDLMRAGYLRRSGGVYRVRGKFRDKFFAERISPFRGFVTII ALDGGKEKMVELYLDGKLTMRRGFEHAHERFFDELDF >Mature_276_residues TKETLIPVRHEEVAVCGEYILAAVTEDGKAYFSPRHVCDALGIAWTGQRVKIMDDDVLKLVVKEIFTTGRDGKTYKMSML PIEFANGWLFTIKKVRPELQAKLNLFRAEAYHALDLWFRKGLRYEEDSLEALGLPDFESPAEAARAWAEEREQRIELEAE NATLRPKAKVYETCFADRQMSVVQFARTLHGVNSMKVKEDLMRAGYLRRSGGVYRVRGKFRDKFFAERISPFRGFVTIIA LDGGKEKMVELYLDGKLTMRRGFEHAHERFFDELDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32006; Mature: 31875
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKETLIPVRHEEVAVCGEYILAAVTEDGKAYFSPRHVCDALGIAWTGQRVKIMDDDVLK CCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCEECCCEEEECCHHHHH LVVKEIFTTGRDGKTYKMSMLPIEFANGWLFTIKKVRPELQAKLNLFRAEAYHALDLWFR HHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHH KGLRYEEDSLEALGLPDFESPAEAARAWAEEREQRIELEAENATLRPKAKVYETCFADRQ CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCH MSVVQFARTLHGVNSMKVKEDLMRAGYLRRSGGVYRVRGKFRDKFFAERISPFRGFVTII HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCHHCCEEEEE ALDGGKEKMVELYLDGKLTMRRGFEHAHERFFDELDF EECCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKETLIPVRHEEVAVCGEYILAAVTEDGKAYFSPRHVCDALGIAWTGQRVKIMDDDVLK CCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCEECCCEEEECCHHHHH LVVKEIFTTGRDGKTYKMSMLPIEFANGWLFTIKKVRPELQAKLNLFRAEAYHALDLWFR HHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHH KGLRYEEDSLEALGLPDFESPAEAARAWAEEREQRIELEAENATLRPKAKVYETCFADRQ CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCH MSVVQFARTLHGVNSMKVKEDLMRAGYLRRSGGVYRVRGKFRDKFFAERISPFRGFVTII HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCHHCCEEEEE ALDGGKEKMVELYLDGKLTMRRGFEHAHERFFDELDF EECCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA