| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357837
Identifier: 78357837
GI number: 78357837
Start: 2787767
End: 2788360
Strand: Direct
Name: 78357837
Synonym: Dde_2795
Alternate gene names: NA
Gene position: 2787767-2788360 (Clockwise)
Preceding gene: 78357836
Following gene: 78357838
Centisome position: 74.73
GC content: 51.68
Gene sequence:
>594_bases TTGAGCGAAGGAACCCCCAAACTCAAGGAGGACATAATCATGGGTGAAATCAGCACACTCACCCTCAACGGTATGGCCGA TGCCCGAACCATCGTGGATGAAGACGGTGAACTCTGGTTTGTCGCAATGGATGTTTGCAAACACCTAGGTCTCAAGCCGA GGGATTCAGTGCGCTACTTGGACGACGACATGAAAAAGCATCTTCCAAGAACCGCCCTCGGAATGAAGCCCGGAAAGCCG CTGCTGATTATCAACGAACCCGGTCTGTACACGCTCATATTCCAAAGCCGAAAGCCTGAAGCCATCGCGTTTCAGGATTG GGTTTGCAAGGAAGTCCTGCCCTCGATCCGGAAGCATGGTGCGTACTTCATGATGAAGCCCACGGATACGGATGAAAGCA TAATCCAGAAGGCAACGCAGATCATTGCACTGGCGCGTGAAGATGACGGCATTGAATGCCCCGACATCTTGCGAGAGTTG GCAGACAAGCTTGAAGCCGCCCTGCAAGGTCAATTCATGCCGACATTCACGACTAGCACTTGCAAGGCTTATTCGAATGA CACCAGCGACTTAGGCCCAATTATTGACGTCTAA
Upstream 100 bases:
>100_bases GGTTGCACCAATGAGCAGAAGAAACGGCTCAACAAACGCTCTCTTCAAAGATGGTAACAAAAAGCACATGATTTCAGACA GATGCAATTAGGTTGCACCT
Downstream 100 bases:
>100_bases CCCAAAGGAAAAAGCTATGACACGCAGTCAATTATGCATCAAAGCTAAGTGTTTTAAAAACGGACTATCACCGCCGCATG ATGCCCTAAGGCAAACGGTG
Product: prophage antirepressor-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSEGTPKLKEDIIMGEISTLTLNGMADARTIVDEDGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTALGMKPGKP LLIINEPGLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHGAYFMMKPTDTDESIIQKATQIIALAREDDGIECPDILREL ADKLEAALQGQFMPTFTTSTCKAYSNDTSDLGPIIDV
Sequences:
>Translated_197_residues MSEGTPKLKEDIIMGEISTLTLNGMADARTIVDEDGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTALGMKPGKP LLIINEPGLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHGAYFMMKPTDTDESIIQKATQIIALAREDDGIECPDILREL ADKLEAALQGQFMPTFTTSTCKAYSNDTSDLGPIIDV >Mature_196_residues SEGTPKLKEDIIMGEISTLTLNGMADARTIVDEDGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTALGMKPGKPL LIINEPGLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHGAYFMMKPTDTDESIIQKATQIIALAREDDGIECPDILRELA DKLEAALQGQFMPTFTTSTCKAYSNDTSDLGPIIDV
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 22005; Mature: 21873
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGTPKLKEDIIMGEISTLTLNGMADARTIVDEDGELWFVAMDVCKHLGLKPRDSVRYL CCCCCCCHHHHHHHCCEEEEEECCCCCHHHHCCCCCCEEEEHHHHHHHCCCCCCCHHHHH DDDMKKHLPRTALGMKPGKPLLIINEPGLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHG HHHHHHHCCHHHCCCCCCCCEEEEECCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCC AYFMMKPTDTDESIIQKATQIIALAREDDGIECPDILRELADKLEAALQGQFMPTFTTST CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECHH CKAYSNDTSDLGPIIDV HHHCCCCCCCCCCCCCC >Mature Secondary Structure SEGTPKLKEDIIMGEISTLTLNGMADARTIVDEDGELWFVAMDVCKHLGLKPRDSVRYL CCCCCCHHHHHHHCCEEEEEECCCCCHHHHCCCCCCEEEEHHHHHHHCCCCCCCHHHHH DDDMKKHLPRTALGMKPGKPLLIINEPGLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHG HHHHHHHCCHHHCCCCCCCCEEEEECCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCC AYFMMKPTDTDESIIQKATQIIALAREDDGIECPDILRELADKLEAALQGQFMPTFTTST CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECHH CKAYSNDTSDLGPIIDV HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]