| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is livK [C]
Identifier: 78357810
GI number: 78357810
Start: 2768399
End: 2769652
Strand: Direct
Name: livK [C]
Synonym: Dde_2768
Alternate gene names: 78357810
Gene position: 2768399-2769652 (Clockwise)
Preceding gene: 78357807
Following gene: 78357811
Centisome position: 74.22
GC content: 63.56
Gene sequence:
>1254_bases ATGGGGGGACGCAGTACGGTATATTCTGTCCGGTACAGGGCCGCAGATGTTCTGACGGCAGCCCTGCTGGCTGTGCTGTG CCTTGCGGCTGCTCTTCCGGCCTTTGCCGGCGGCAGACAGGGTCCGGCAGTGCTGGGCATAGCCGCCGTATCCCCCGTGA CCGACCCCGCCGAAGTATCTTTCCAGCACGGAGTGCGTGTTGCCGTGGCCGTGTTCAACTCTCTGGGCGGACTCATGGGG CAGCCGATACGCACCGTGCTCATTCCGCTGGGGTCTTCTCCGCTGGAAGCACGCCATGCCGCCAGACAACTGGTGCATAC ACCGCCGCTGGGCATCATCGGGCCGTCTGCCAGCACGCAGGCCCTTGCCATGGCCGAAGTGCTGGACCGCGCGCGTATAC CCACCATCACGCCTTCGGCATCCCACCCGCTTGTCATCCGCGGCAGGCCGTACATTTTCCGCATCTGCAACGGCGACACA GCCAACGCCAACGCCATGGCGCGGTTCATCACGCGGCATCTGGGACTTTCACGCGTGGCCGTCATAACCAACATCAGCAG CGATTACAGCATTTCCATGTCGGAATCGTTTGTGGATGAAGCCATCAGGCAGGGCGGTGAAGTCGTCTGGCGGGGACAAT ATCTGGACCGTCAGCAGGATTTTTCCGTCATTATACACCAGTTGCTGCGGCTGAAGCCGGAATGCGTCTTCCTGCCCGAC TTCATGCGTTCCAGCGGACTGTTCATGCAGCAGGCCGCCGGCATGGGGCTGAAGACAGTATTTGCAGGGGGCGATGCATG GGACGCCACCCTGCCCCGCTACGCGGCCGCCGCTGCGGAAAATGCCTATTATATGGCACAATGGATACCCGAAGAACCGG CCGGTGCCGCAAAAAACCATCATGACCGGTGCCGCGGGCATATCACTCCCATGCGTGCATTCTGCAAGGCACCGTGGCTG CTGGCCCGCACCCATGCCTTGCGTTATCTGGGCAGAGACTTTGCCGGCAGTCTGGAAGCGCTGGGCTACGATGCGGCCTG TGTGCTGCTGGCCGCCGCCCGCCGTGCGGGTTCGTGCGACCCGCGCGCGGTGCGCGAAGCTCTGGCGCAGACATACTGGC ACGGGCTGACCGGTCCGCTGCACTTTGACGCCGACGGTGCACCGCCCCCCGGACCTGTTCATATCCTGCAGCTGCGCAAC GGTTCGGCCCGGCCGGTACAGACTGTCACGCTTTCCCCGCGGGAGGCTCAATGA
Upstream 100 bases:
>100_bases TCATTTGGCATACTCCACCAGTCAAGGCAAGCATCTAACCCTCTTGCCTGATTCCGCCAATGCATGTATTAAGAATGATT CTTTTTTGTGGGGAGTGACA
Downstream 100 bases:
>100_bases ACCGAACCCCTCTCAAACGCAGATTCACCGTCACCCTCATGCTGTTCACCCTGCTGTGCTGTGCTCTGTACACTGTGACG GCAAGCAGTTTCATGCATTA
Product: ABC-type branched-chain amino acid transport systems periplasmic component-like
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MGGRSTVYSVRYRAADVLTAALLAVLCLAAALPAFAGGRQGPAVLGIAAVSPVTDPAEVSFQHGVRVAVAVFNSLGGLMG QPIRTVLIPLGSSPLEARHAARQLVHTPPLGIIGPSASTQALAMAEVLDRARIPTITPSASHPLVIRGRPYIFRICNGDT ANANAMARFITRHLGLSRVAVITNISSDYSISMSESFVDEAIRQGGEVVWRGQYLDRQQDFSVIIHQLLRLKPECVFLPD FMRSSGLFMQQAAGMGLKTVFAGGDAWDATLPRYAAAAAENAYYMAQWIPEEPAGAAKNHHDRCRGHITPMRAFCKAPWL LARTHALRYLGRDFAGSLEALGYDAACVLLAAARRAGSCDPRAVREALAQTYWHGLTGPLHFDADGAPPPGPVHILQLRN GSARPVQTVTLSPREAQ
Sequences:
>Translated_417_residues MGGRSTVYSVRYRAADVLTAALLAVLCLAAALPAFAGGRQGPAVLGIAAVSPVTDPAEVSFQHGVRVAVAVFNSLGGLMG QPIRTVLIPLGSSPLEARHAARQLVHTPPLGIIGPSASTQALAMAEVLDRARIPTITPSASHPLVIRGRPYIFRICNGDT ANANAMARFITRHLGLSRVAVITNISSDYSISMSESFVDEAIRQGGEVVWRGQYLDRQQDFSVIIHQLLRLKPECVFLPD FMRSSGLFMQQAAGMGLKTVFAGGDAWDATLPRYAAAAAENAYYMAQWIPEEPAGAAKNHHDRCRGHITPMRAFCKAPWL LARTHALRYLGRDFAGSLEALGYDAACVLLAAARRAGSCDPRAVREALAQTYWHGLTGPLHFDADGAPPPGPVHILQLRN GSARPVQTVTLSPREAQ >Mature_416_residues GGRSTVYSVRYRAADVLTAALLAVLCLAAALPAFAGGRQGPAVLGIAAVSPVTDPAEVSFQHGVRVAVAVFNSLGGLMGQ PIRTVLIPLGSSPLEARHAARQLVHTPPLGIIGPSASTQALAMAEVLDRARIPTITPSASHPLVIRGRPYIFRICNGDTA NANAMARFITRHLGLSRVAVITNISSDYSISMSESFVDEAIRQGGEVVWRGQYLDRQQDFSVIIHQLLRLKPECVFLPDF MRSSGLFMQQAAGMGLKTVFAGGDAWDATLPRYAAAAAENAYYMAQWIPEEPAGAAKNHHDRCRGHITPMRAFCKAPWLL ARTHALRYLGRDFAGSLEALGYDAACVLLAAARRAGSCDPRAVREALAQTYWHGLTGPLHFDADGAPPPGPVHILQLRNG SARPVQTVTLSPREAQ
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=347, Percent_Identity=24.7838616714697, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI48994941, Length=249, Percent_Identity=24.8995983935743, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44636; Mature: 44505
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRSTVYSVRYRAADVLTAALLAVLCLAAALPAFAGGRQGPAVLGIAAVSPVTDPAEVS CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHH FQHGVRVAVAVFNSLGGLMGQPIRTVLIPLGSSPLEARHAARQLVHTPPLGIIGPSASTQ HHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEECCCCCHH ALAMAEVLDRARIPTITPSASHPLVIRGRPYIFRICNGDTANANAMARFITRHLGLSRVA HHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCHHEE VITNISSDYSISMSESFVDEAIRQGGEVVWRGQYLDRQQDFSVIIHQLLRLKPECVFLPD EEEECCCCCEEEHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCH FMRSSGLFMQQAAGMGLKTVFAGGDAWDATLPRYAAAAAENAYYMAQWIPEEPAGAAKNH HHCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC HDRCRGHITPMRAFCKAPWLLARTHALRYLGRDFAGSLEALGYDAACVLLAAARRAGSCD HHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHCCCCC PRAVREALAQTYWHGLTGPLHFDADGAPPPGPVHILQLRNGSARPVQTVTLSPREAQ HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCC >Mature Secondary Structure GGRSTVYSVRYRAADVLTAALLAVLCLAAALPAFAGGRQGPAVLGIAAVSPVTDPAEVS CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHH FQHGVRVAVAVFNSLGGLMGQPIRTVLIPLGSSPLEARHAARQLVHTPPLGIIGPSASTQ HHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEECCCCCHH ALAMAEVLDRARIPTITPSASHPLVIRGRPYIFRICNGDTANANAMARFITRHLGLSRVA HHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCHHEE VITNISSDYSISMSESFVDEAIRQGGEVVWRGQYLDRQQDFSVIIHQLLRLKPECVFLPD EEEECCCCCEEEHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCH FMRSSGLFMQQAAGMGLKTVFAGGDAWDATLPRYAAAAAENAYYMAQWIPEEPAGAAKNH HHCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC HDRCRGHITPMRAFCKAPWLLARTHALRYLGRDFAGSLEALGYDAACVLLAAARRAGSCD HHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHCCCCC PRAVREALAQTYWHGLTGPLHFDADGAPPPGPVHILQLRNGSARPVQTVTLSPREAQ HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]