Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is murI [H]

Identifier: 78357785

GI number: 78357785

Start: 2746618

End: 2747475

Strand: Direct

Name: murI [H]

Synonym: Dde_2743

Alternate gene names: 78357785

Gene position: 2746618-2747475 (Clockwise)

Preceding gene: 78357784

Following gene: 78357786

Centisome position: 73.63

GC content: 63.87

Gene sequence:

>858_bases
ATGCAGATAGAATCCGGCTGCGATTCCCGCCGTGACCTGCCCATCGGCATGTTCGACTCCGGCGTGGGGGGCCTGACCGT
GCTCAAGGCGCTGCGCCGCCGCATGCCCTGTGAAAGCATTTTGTATCTGGGCGATACCGCCCGGCTGCCCTACGGCACAA
AATCGGCCGAGACAGTCACCCGCTATGCCTTGCAGGCTTCGGCCAGACTGGTCGAAAGAGATATAAAGCTGCTGGTGGTG
GCCTGCAACACCGTGAGCGCCACGGCTCTTGAGCCGCTGCGCAACGCCTATCCGGGCATTCCGGTCATAGGCGTGGTCCA
GCCCGGCGCACAGGCCAGCTGCCGGGCATCCGCCACGGGGCGTATTGCGGTTATCGCCACGGAATCAACCATCCGCGGCC
GCGCGTACGAGCGTGCCATCCACGCCATCAGACCGGATGCCCAGACCACCGGCGCACCCTGCCCCCTGTTTGTGCCGCTG
GCCGAAGAAGGCTGGCTGGACGGCCCGCTGGTCGAAGGCATAGCCGCCCGCTATCTGAACCCCATCTTTCATCCCGCCTC
CGGTTCCGGCAGGCCGGAAACACCGGATTGTCTGGTGCTGGGCTGCACTCATTTTCCGCTGCTGGCCGGTGCCATACGCA
ATGTCATCGGTGACGGAGTGACCATAGTGGACAGCGCGGCCATCACTGCAAAAGCGGTGGAGGCGGAACTGCGCGCCAGA
GGTCTGGAGCGCCGGGCCACTGAATGCGGTGAGACAAGATTTATGGCCACGGACGATGTTCCCCGTTTTTCACGCACCGG
CGGTCTTTTTCTGGGTACTCCGGTCGCCCCCGACGAAGTGGAACTGGTGGACCTGTAA

Upstream 100 bases:

>100_bases
GCCGCGACGGTATTCTGCTGGAACGGGTGCTTGATACACTAAGAGCGCCGGTCACCAGCAGTTCGTTTGAGCTGCTGGAC
AACGACGGGGAGCAGTGCGC

Downstream 100 bases:

>100_bases
CAACCGGCAACGCCGGAGGAAACGGCATGAACGCTTACACTGAAATTCCCATGGTTCCGGGGCCCACCACCCTGCACCCC
GATGCACTGGCGGCCATGGG

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQIESGCDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETVTRYALQASARLVERDIKLLVV
ACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASATGRIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPL
AEEGWLDGPLVEGIAARYLNPIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAKAVEAELRAR
GLERRATECGETRFMATDDVPRFSRTGGLFLGTPVAPDEVELVDL

Sequences:

>Translated_285_residues
MQIESGCDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETVTRYALQASARLVERDIKLLVV
ACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASATGRIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPL
AEEGWLDGPLVEGIAARYLNPIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAKAVEAELRAR
GLERRATECGETRFMATDDVPRFSRTGGLFLGTPVAPDEVELVDL
>Mature_285_residues
MQIESGCDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETVTRYALQASARLVERDIKLLVV
ACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASATGRIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPL
AEEGWLDGPLVEGIAARYLNPIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAKAVEAELRAR
GLERRATECGETRFMATDDVPRFSRTGGLFLGTPVAPDEVELVDL

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=216, Percent_Identity=34.7222222222222, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 30238; Mature: 30238

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIESGCDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETVT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCHHHHHH
RYALQASARLVERDIKLLVVACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASATG
HHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
RIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPLAEEGWLDGPLVEGIAARYLN
CEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHC
PIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAKAVEAELRAR
CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
GLERRATECGETRFMATDDVPRFSRTGGLFLGTPVAPDEVELVDL
HHHHHHHHHCCEEEEECCCCCCHHCCCCEEEECCCCCCCEEEECC
>Mature Secondary Structure
MQIESGCDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETVT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCHHHHHH
RYALQASARLVERDIKLLVVACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASATG
HHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
RIAVIATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPLAEEGWLDGPLVEGIAARYLN
CEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHC
PIFHPASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAKAVEAELRAR
CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH
GLERRATECGETRFMATDDVPRFSRTGGLFLGTPVAPDEVELVDL
HHHHHHHHHCCEEEEECCCCCCHHCCCCEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA