| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357766
Identifier: 78357766
GI number: 78357766
Start: 2724701
End: 2726074
Strand: Reverse
Name: 78357766
Synonym: Dde_2724
Alternate gene names: NA
Gene position: 2726074-2724701 (Counterclockwise)
Preceding gene: 78357767
Following gene: 78357765
Centisome position: 73.08
GC content: 64.12
Gene sequence:
>1374_bases ATGATTTCATTGCGTGTTGTCTGTGTGCTGCTGGGCTGTATGCTTCTGGCGGGCGGGTGCGCCCCCCGCGTGGTGCAGCC GCCTTTTCCCGCCCCTCCCGCCGTGCGCGACATTGACTGTCTGGAACAGGACCTCATGGTGTACGCGCGGGCGCTGCCGC AGCCCGATGCTCCGCTGCTGACTCTGCAGGATCAGGAACGGCAGACCGGTTTTTTTCTGCGCCGCTTTTTTGCCGCATGG GATATGCGTGCTCCGTCCATGCCGCGTCACACCATGTTTGCCGACCTGCGGGCCACTCTGGACGGTAAAGGCTGGGGAGC CAACCTGCTGCCCGTACCCCCCGCGCGTACGGAGTCGCTGTGGCAGCGCTGCCGTACCGGAGAATATCCATCGCTGGCAG TTCCTGCCATTATCACCGGCAATACCTCGCTGCGCATGGCGCCGGACGACGAACCCTTTTTCCGCGATCCGGCCAGAGCG GGCGAGGGCTATCCTTTTGATTATTTCCAGTACAGTGCGTTATGGGCCGGTATGCCCGTTTTTGTGGTGCACGCTTCGTC CGACGGCGGATGGCTGCTGTGCGAAACGCCGCTGGCCGCCGGGTGGGTGCGCGCCCGCGATGTGGCGTATGTGGATTCCG GGTTTATGAACGCGTACAGAACCGGAATGTATGCTGCCGTTGTGGCGGACGATACTCCGCTGCGGACGGCGGAAGGCCGC TGGGTGCTTACGGCCCATACCGGTGCTGTTTTTCCGGTGGACAAGGCTGATGCCGCCGGTCTTGTTCTGCGGGTGCCCGT GCGCGGGGCGGACGGAGGCGCGGGTATCCGGCTGGTGCATGTTTCGTACGGTGCGGCGGCGCGTATGCCGCTGCCGCTTA CCCCCGTGGCGGTGGCCATGGTGGGCAACGGCATGATGCGGCAGCCCTACGGGTGGGGCGGTCTGCTGGAAAACCGCGAT TGTTCGGCCGCCATGCATGATCTGTTTGCCCCCTTCGGCATCTGGCTGCCGCGCAATTCATCACAGCAGGCCCGGGCCGG AGCGTTGGTGTCGCTGGAAGAAATGACTCCCCCGCAACGCGAGGCGCATATTCTGGAACAGGGTGTGCCTTTTTTCAGTT TTATCTGGATGCGCGGACATATCGGCCTGTATCTGGGGCCTGACCGGCAGGACTGCGCAGCGGGAAAACCGCTCATGTTT CACAACGTGTGGGGCATCCGGACCGGCGGCGGGCGTGCGCCCGAAGGGCGTCTGGTCATCGGACGGGCGGTGGTGACCAC CCTGCACGCCGGCGAAGAATATCCGCAGGTGCGTAAGAACTGGATGCTCGACCGTATCCGCGGACTCACGCTGTTGCCGC CGCAGGTTCCCTGA
Upstream 100 bases:
>100_bases TCTGGCGCAGCGCCTGGCCCGCGGGGTATGACCGGCGGCGCCGGACGGTGCGGTGCTGCGGTGTATGTAAACAGCGGATG CTTCCGCGACAGGTGCTGCC
Downstream 100 bases:
>100_bases AGGCAGTACCGTGCCGCAGGCCATGCCGCAGATGTCAATGCCAAGTGAGAACGGTATGTTAAAGCGGCACTACCTTTTTG GCGGCATTCCGGCTATACAC
Product: NLP/P60 family lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Nlp/P60 Protein; Cell Wall-Associated Hydrolase; Cell Wall-Associated Hydrolases; NlpC/P60 Family Protein; NLP/P60 Family Lipoprotein; NlpC-P60 Family Protein; Cell Wall-Associated Hydrolase Protein; Lipoprotein NLP/P60 Family; DNA Gyrase Subunit A
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLLTLQDQERQTGFFLRRFFAAW DMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESLWQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARA GEGYPFDYFQYSALWAGMPVFVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAMVGNGMMRQPYGWGGLLENRD CSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQREAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMF HNVWGIRTGGGRAPEGRLVIGRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP
Sequences:
>Translated_457_residues MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLLTLQDQERQTGFFLRRFFAAW DMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESLWQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARA GEGYPFDYFQYSALWAGMPVFVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAMVGNGMMRQPYGWGGLLENRD CSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQREAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMF HNVWGIRTGGGRAPEGRLVIGRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP >Mature_457_residues MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLLTLQDQERQTGFFLRRFFAAW DMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESLWQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARA GEGYPFDYFQYSALWAGMPVFVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAMVGNGMMRQPYGWGGLLENRD CSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQREAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMF HNVWGIRTGGGRAPEGRLVIGRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49988; Mature: 49988
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE TLQDQERQTGFFLRRFFAAWDMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESL EECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCHHHH WQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARAGEGYPFDYFQYSALWAGMPV HHHHCCCCCCCEEECEEEECCCEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEE FVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR EEEEECCCCCEEEECCCCCCCHHHHCCEEEECCHHHHHHHCCEEEEEEECCCCCEECCCC WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAM EEEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH VGNGMMRQPYGWGGLLENRDCSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQR HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHCCCEEEHHHCCCCHH EAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMFHNVWGIRTGGGRAPEGRLVI HHHHHHHCCCHHHHHHHHCCEEEEECCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCEEE GRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP HHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCC >Mature Secondary Structure MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE TLQDQERQTGFFLRRFFAAWDMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESL EECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCHHHH WQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARAGEGYPFDYFQYSALWAGMPV HHHHCCCCCCCEEECEEEECCCEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEE FVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR EEEEECCCCCEEEECCCCCCCHHHHCCEEEECCHHHHHHHCCEEEEEEECCCCCEECCCC WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAM EEEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH VGNGMMRQPYGWGGLLENRDCSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQR HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHCCCEEEHHHCCCCHH EAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMFHNVWGIRTGGGRAPEGRLVI HHHHHHHCCCHHHHHHHHCCEEEEECCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCEEE GRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP HHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA