Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78357766

Identifier: 78357766

GI number: 78357766

Start: 2724701

End: 2726074

Strand: Reverse

Name: 78357766

Synonym: Dde_2724

Alternate gene names: NA

Gene position: 2726074-2724701 (Counterclockwise)

Preceding gene: 78357767

Following gene: 78357765

Centisome position: 73.08

GC content: 64.12

Gene sequence:

>1374_bases
ATGATTTCATTGCGTGTTGTCTGTGTGCTGCTGGGCTGTATGCTTCTGGCGGGCGGGTGCGCCCCCCGCGTGGTGCAGCC
GCCTTTTCCCGCCCCTCCCGCCGTGCGCGACATTGACTGTCTGGAACAGGACCTCATGGTGTACGCGCGGGCGCTGCCGC
AGCCCGATGCTCCGCTGCTGACTCTGCAGGATCAGGAACGGCAGACCGGTTTTTTTCTGCGCCGCTTTTTTGCCGCATGG
GATATGCGTGCTCCGTCCATGCCGCGTCACACCATGTTTGCCGACCTGCGGGCCACTCTGGACGGTAAAGGCTGGGGAGC
CAACCTGCTGCCCGTACCCCCCGCGCGTACGGAGTCGCTGTGGCAGCGCTGCCGTACCGGAGAATATCCATCGCTGGCAG
TTCCTGCCATTATCACCGGCAATACCTCGCTGCGCATGGCGCCGGACGACGAACCCTTTTTCCGCGATCCGGCCAGAGCG
GGCGAGGGCTATCCTTTTGATTATTTCCAGTACAGTGCGTTATGGGCCGGTATGCCCGTTTTTGTGGTGCACGCTTCGTC
CGACGGCGGATGGCTGCTGTGCGAAACGCCGCTGGCCGCCGGGTGGGTGCGCGCCCGCGATGTGGCGTATGTGGATTCCG
GGTTTATGAACGCGTACAGAACCGGAATGTATGCTGCCGTTGTGGCGGACGATACTCCGCTGCGGACGGCGGAAGGCCGC
TGGGTGCTTACGGCCCATACCGGTGCTGTTTTTCCGGTGGACAAGGCTGATGCCGCCGGTCTTGTTCTGCGGGTGCCCGT
GCGCGGGGCGGACGGAGGCGCGGGTATCCGGCTGGTGCATGTTTCGTACGGTGCGGCGGCGCGTATGCCGCTGCCGCTTA
CCCCCGTGGCGGTGGCCATGGTGGGCAACGGCATGATGCGGCAGCCCTACGGGTGGGGCGGTCTGCTGGAAAACCGCGAT
TGTTCGGCCGCCATGCATGATCTGTTTGCCCCCTTCGGCATCTGGCTGCCGCGCAATTCATCACAGCAGGCCCGGGCCGG
AGCGTTGGTGTCGCTGGAAGAAATGACTCCCCCGCAACGCGAGGCGCATATTCTGGAACAGGGTGTGCCTTTTTTCAGTT
TTATCTGGATGCGCGGACATATCGGCCTGTATCTGGGGCCTGACCGGCAGGACTGCGCAGCGGGAAAACCGCTCATGTTT
CACAACGTGTGGGGCATCCGGACCGGCGGCGGGCGTGCGCCCGAAGGGCGTCTGGTCATCGGACGGGCGGTGGTGACCAC
CCTGCACGCCGGCGAAGAATATCCGCAGGTGCGTAAGAACTGGATGCTCGACCGTATCCGCGGACTCACGCTGTTGCCGC
CGCAGGTTCCCTGA

Upstream 100 bases:

>100_bases
TCTGGCGCAGCGCCTGGCCCGCGGGGTATGACCGGCGGCGCCGGACGGTGCGGTGCTGCGGTGTATGTAAACAGCGGATG
CTTCCGCGACAGGTGCTGCC

Downstream 100 bases:

>100_bases
AGGCAGTACCGTGCCGCAGGCCATGCCGCAGATGTCAATGCCAAGTGAGAACGGTATGTTAAAGCGGCACTACCTTTTTG
GCGGCATTCCGGCTATACAC

Product: NLP/P60 family lipoprotein

Products: NA

Alternate protein names: Lipoprotein; Nlp/P60 Protein; Cell Wall-Associated Hydrolase; Cell Wall-Associated Hydrolases; NlpC/P60 Family Protein; NLP/P60 Family Lipoprotein; NlpC-P60 Family Protein; Cell Wall-Associated Hydrolase Protein; Lipoprotein NLP/P60 Family; DNA Gyrase Subunit A

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLLTLQDQERQTGFFLRRFFAAW
DMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESLWQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARA
GEGYPFDYFQYSALWAGMPVFVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR
WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAMVGNGMMRQPYGWGGLLENRD
CSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQREAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMF
HNVWGIRTGGGRAPEGRLVIGRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP

Sequences:

>Translated_457_residues
MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLLTLQDQERQTGFFLRRFFAAW
DMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESLWQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARA
GEGYPFDYFQYSALWAGMPVFVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR
WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAMVGNGMMRQPYGWGGLLENRD
CSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQREAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMF
HNVWGIRTGGGRAPEGRLVIGRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP
>Mature_457_residues
MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLLTLQDQERQTGFFLRRFFAAW
DMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESLWQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARA
GEGYPFDYFQYSALWAGMPVFVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR
WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAMVGNGMMRQPYGWGGLLENRD
CSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQREAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMF
HNVWGIRTGGGRAPEGRLVIGRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49988; Mature: 49988

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
TLQDQERQTGFFLRRFFAAWDMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESL
EECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCHHHH
WQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARAGEGYPFDYFQYSALWAGMPV
HHHHCCCCCCCEEECEEEECCCEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEE
FVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR
EEEEECCCCCEEEECCCCCCCHHHHCCEEEECCHHHHHHHCCEEEEEEECCCCCEECCCC
WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAM
EEEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH
VGNGMMRQPYGWGGLLENRDCSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQR
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHCCCEEEHHHCCCCHH
EAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMFHNVWGIRTGGGRAPEGRLVI
HHHHHHHCCCHHHHHHHHCCEEEEECCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCEEE
GRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCC
>Mature Secondary Structure
MISLRVVCVLLGCMLLAGGCAPRVVQPPFPAPPAVRDIDCLEQDLMVYARALPQPDAPLL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
TLQDQERQTGFFLRRFFAAWDMRAPSMPRHTMFADLRATLDGKGWGANLLPVPPARTESL
EECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCHHHH
WQRCRTGEYPSLAVPAIITGNTSLRMAPDDEPFFRDPARAGEGYPFDYFQYSALWAGMPV
HHHHCCCCCCCEEECEEEECCCEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEE
FVVHASSDGGWLLCETPLAAGWVRARDVAYVDSGFMNAYRTGMYAAVVADDTPLRTAEGR
EEEEECCCCCEEEECCCCCCCHHHHCCEEEECCHHHHHHHCCEEEEEEECCCCCEECCCC
WVLTAHTGAVFPVDKADAAGLVLRVPVRGADGGAGIRLVHVSYGAAARMPLPLTPVAVAM
EEEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH
VGNGMMRQPYGWGGLLENRDCSAAMHDLFAPFGIWLPRNSSQQARAGALVSLEEMTPPQR
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCHHHCCCEEEHHHCCCCHH
EAHILEQGVPFFSFIWMRGHIGLYLGPDRQDCAAGKPLMFHNVWGIRTGGGRAPEGRLVI
HHHHHHHCCCHHHHHHHHCCEEEEECCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCEEE
GRAVVTTLHAGEEYPQVRKNWMLDRIRGLTLLPPQVP
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA