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The map label for this gene is rpe [H]

Identifier: 78357674

GI number: 78357674

Start: 2648969

End: 2649622

Strand: Reverse

Name: rpe [H]

Synonym: Dde_2632

Alternate gene names: 78357674

Gene position: 2649622-2648969 (Counterclockwise)

Preceding gene: 78357675

Following gene: 78357673

Centisome position: 71.03

GC content: 57.19

Gene sequence:

>654_bases
ATGATTTTATCTCCTTCGTTGCTTTCTTCCGACTACGGAAGGCTGGCGGACGAACTTGCCGCTCTTGAAGACGCAGGCCT
TTCGTGGGTGCACTGGGATGTCATGGACGGCATGTTTGTGCCTAACATCACGCTGGGAGCACCCATCATCAAAAAGCTGC
GCAAAGCCAGCGGACTTTTTTTTGATGTGCACCTGATGGTGCAGGCACCCGAACGCTATATAGCGGATTTTGCCGACGCC
GGTGCCGATATGCTGGTGGTGCACGCCGAAGCCACAAACCATCTGGAGCGTACCCTGAGCGAAATCCGCCGCATGGGCGT
TCAGTGCGGCGTGGCTCTCAATCCGCATACGCCGCTCTGTGTGCTTGAGTACGTGCTGGATCAGCTAGACATGGTGCTGA
TCATGAGCGTCAACCCCGGCTTCGGCGGGCAGAAGTTCATACCCTTCACCATGCGAAAAATAGAAGAACTTTCCGCCATG
ATCACCGCCAGAGGGCTGAAAACCCTCATTCAGGTAGATGGCGGCGTGGATCCTGAAAACACACCGGAGCTGGTGCGCCG
CGGGGCGGATGTGCTGGTCTCCGGATCTGCTTTTTTCGGGCATCCTCCCTATCGTCAGCGGCACGATGCCTTTCAGGCAG
CGGCAGCCCGGTAG

Upstream 100 bases:

>100_bases
AAACGGTATCGTGCGGGAAGTCATAGACGAGCTTCAGGTGCTGCGCACCATGCTGCACGCTGCCGGAACGGACCGCATGT
AACGGTCCCGGGGAACCACT

Downstream 100 bases:

>100_bases
CAGTCATGTAATGGAACGGGGCACGGTAACACGTGCCCCTTTTTCGGGCTTCCGGCTTGATTCCTGTGCGGATGAACAGT
CGCGTCCGGCGGATGGTGCC

Product: ribulose-5-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MILSPSLLSSDYGRLADELAALEDAGLSWVHWDVMDGMFVPNITLGAPIIKKLRKASGLFFDVHLMVQAPERYIADFADA
GADMLVVHAEATNHLERTLSEIRRMGVQCGVALNPHTPLCVLEYVLDQLDMVLIMSVNPGFGGQKFIPFTMRKIEELSAM
ITARGLKTLIQVDGGVDPENTPELVRRGADVLVSGSAFFGHPPYRQRHDAFQAAAAR

Sequences:

>Translated_217_residues
MILSPSLLSSDYGRLADELAALEDAGLSWVHWDVMDGMFVPNITLGAPIIKKLRKASGLFFDVHLMVQAPERYIADFADA
GADMLVVHAEATNHLERTLSEIRRMGVQCGVALNPHTPLCVLEYVLDQLDMVLIMSVNPGFGGQKFIPFTMRKIEELSAM
ITARGLKTLIQVDGGVDPENTPELVRRGADVLVSGSAFFGHPPYRQRHDAFQAAAAR
>Mature_217_residues
MILSPSLLSSDYGRLADELAALEDAGLSWVHWDVMDGMFVPNITLGAPIIKKLRKASGLFFDVHLMVQAPERYIADFADA
GADMLVVHAEATNHLERTLSEIRRMGVQCGVALNPHTPLCVLEYVLDQLDMVLIMSVNPGFGGQKFIPFTMRKIEELSAM
ITARGLKTLIQVDGGVDPENTPELVRRGADVLVSGSAFFGHPPYRQRHDAFQAAAAR

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=199, Percent_Identity=41.2060301507538, Blast_Score=154, Evalue=7e-38,
Organism=Homo sapiens, GI219879828, Length=199, Percent_Identity=38.6934673366834, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI24307923, Length=155, Percent_Identity=34.1935483870968, Blast_Score=88, Evalue=6e-18,
Organism=Escherichia coli, GI1789788, Length=218, Percent_Identity=44.4954128440367, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1790523, Length=203, Percent_Identity=38.423645320197, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1790754, Length=208, Percent_Identity=32.6923076923077, Blast_Score=108, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17552948, Length=205, Percent_Identity=40.9756097560976, Blast_Score=151, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6322341, Length=211, Percent_Identity=41.7061611374408, Blast_Score=165, Evalue=6e-42,
Organism=Drosophila melanogaster, GI24586301, Length=199, Percent_Identity=40.2010050251256, Blast_Score=147, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23802; Mature: 23802

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSPSLLSSDYGRLADELAALEDAGLSWVHWDVMDGMFVPNITLGAPIIKKLRKASGLF
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCEECCCCCCCHHHHHHHHHHCCCE
FDVHLMVQAPERYIADFADAGADMLVVHAEATNHLERTLSEIRRMGVQCGVALNPHTPLC
EEEEEEEECCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCEEECCCCHHH
VLEYVLDQLDMVLIMSVNPGFGGQKFIPFTMRKIEELSAMITARGLKTLIQVDGGVDPEN
HHHHHHHHHCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TPELVRRGADVLVSGSAFFGHPPYRQRHDAFQAAAAR
CHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MILSPSLLSSDYGRLADELAALEDAGLSWVHWDVMDGMFVPNITLGAPIIKKLRKASGLF
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCEECCCCCCCHHHHHHHHHHCCCE
FDVHLMVQAPERYIADFADAGADMLVVHAEATNHLERTLSEIRRMGVQCGVALNPHTPLC
EEEEEEEECCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCEEECCCCHHH
VLEYVLDQLDMVLIMSVNPGFGGQKFIPFTMRKIEELSAMITARGLKTLIQVDGGVDPEN
HHHHHHHHHCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TPELVRRGADVLVSGSAFFGHPPYRQRHDAFQAAAAR
CHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]