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The map label for this gene is ydfK [H]

Identifier: 78357531

GI number: 78357531

Start: 2508341

End: 2509027

Strand: Reverse

Name: ydfK [H]

Synonym: Dde_2488

Alternate gene names: 78357531

Gene position: 2509027-2508341 (Counterclockwise)

Preceding gene: 78357533

Following gene: 78357530

Centisome position: 67.26

GC content: 53.71

Gene sequence:

>687_bases
GTGGTTTTTCCTACTGGTTCGCTGGTTAACCTTATTGCCATAGTGCTGGGCAGCTGCGCCGGCATGCTGTTGGGAAACCG
CCTGCCCGAGAGGGTGCGGTACATTGTTTTCTGTGGTCTGGGGCTGGCGACGCTGGTTATCGGCATGCAGATGGCACTGA
AAACCCAGAATCCTCTGATTCTGGTGTTCAGTATTCTTCTGGGTGGCATCACGGGAGAACTGCTTCAGATTGAACGGGGA
CTGAACAGTCTGGGCGAGCGTCTTAAAAAGCGTCTGAAATCAAACAATTTACGTTTTGTTGACGGGTTTGTTTCTGCCAC
GCTGCTTTTTGTCATCGGCTCCATGGCCATACTGGGGCCGTTTGACGAGGCACTGCGCGGAGACCGGACACTGCTGTACA
CCAAGTCCATTCTGGATTGCTTTGCCTCTGTACCGCTGGCGGCCAGTTTCGGTTCCGGCGTTTTATTTTCCGCCGTTCCC
GTTTTTCTTTATCAGGGGGCGCTCACCCTGTTTGCGGGTGTGCTCCAGCCCATGCTCACTCCGGCAATGATGAATGAGAT
TATTGCAACCGGGGGCCTGATGATTCTGGGCATTGCGCTGGGTCTTCTGGACGTCAAGCGCATCCCTCTTTCCAACCTGT
TGCCTTCGCTGGTTTACGCAGGCGTTCTTTCCTACTTTTTCATGTAG

Upstream 100 bases:

>100_bases
GATTTCCTGTTTATTTCCCCGATGGTTTGCGCTATCAGAACTCGTTGATTCTGCATGCGGGCAGGCTGAATGTGCCATTT
TTTAACTGCGGGGGCTCGAC

Downstream 100 bases:

>100_bases
CGCCGCTGGTGCGGCGGCTGAACTTTCTGCTATGCTCACGGGCGCGCGTATTGCGCGCCCGTGTCTTTCTGCGCGCTGTA
CAGTTTTTTGCGTGCCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVFPTGSLVNLIAIVLGSCAGMLLGNRLPERVRYIVFCGLGLATLVIGMQMALKTQNPLILVFSILLGGITGELLQIERG
LNSLGERLKKRLKSNNLRFVDGFVSATLLFVIGSMAILGPFDEALRGDRTLLYTKSILDCFASVPLAASFGSGVLFSAVP
VFLYQGALTLFAGVLQPMLTPAMMNEIIATGGLMILGIALGLLDVKRIPLSNLLPSLVYAGVLSYFFM

Sequences:

>Translated_228_residues
MVFPTGSLVNLIAIVLGSCAGMLLGNRLPERVRYIVFCGLGLATLVIGMQMALKTQNPLILVFSILLGGITGELLQIERG
LNSLGERLKKRLKSNNLRFVDGFVSATLLFVIGSMAILGPFDEALRGDRTLLYTKSILDCFASVPLAASFGSGVLFSAVP
VFLYQGALTLFAGVLQPMLTPAMMNEIIATGGLMILGIALGLLDVKRIPLSNLLPSLVYAGVLSYFFM
>Mature_228_residues
MVFPTGSLVNLIAIVLGSCAGMLLGNRLPERVRYIVFCGLGLATLVIGMQMALKTQNPLILVFSILLGGITGELLQIERG
LNSLGERLKKRLKSNNLRFVDGFVSATLLFVIGSMAILGPFDEALRGDRTLLYTKSILDCFASVPLAASFGSGVLFSAVP
VFLYQGALTLFAGVLQPMLTPAMMNEIIATGGLMILGIALGLLDVKRIPLSNLLPSLVYAGVLSYFFM

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=193, Percent_Identity=32.1243523316062, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24361; Mature: 24361

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFPTGSLVNLIAIVLGSCAGMLLGNRLPERVRYIVFCGLGLATLVIGMQMALKTQNPLI
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LVFSILLGGITGELLQIERGLNSLGERLKKRLKSNNLRFVDGFVSATLLFVIGSMAILGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCC
FDEALRGDRTLLYTKSILDCFASVPLAASFGSGVLFSAVPVFLYQGALTLFAGVLQPMLT
HHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAMMNEIIATGGLMILGIALGLLDVKRIPLSNLLPSLVYAGVLSYFFM
HHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFPTGSLVNLIAIVLGSCAGMLLGNRLPERVRYIVFCGLGLATLVIGMQMALKTQNPLI
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LVFSILLGGITGELLQIERGLNSLGERLKKRLKSNNLRFVDGFVSATLLFVIGSMAILGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCC
FDEALRGDRTLLYTKSILDCFASVPLAASFGSGVLFSAVPVFLYQGALTLFAGVLQPMLT
HHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAMMNEIIATGGLMILGIALGLLDVKRIPLSNLLPSLVYAGVLSYFFM
HHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]