Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78357498

Identifier: 78357498

GI number: 78357498

Start: 2477726

End: 2479093

Strand: Direct

Name: 78357498

Synonym: Dde_2455

Alternate gene names: NA

Gene position: 2477726-2479093 (Clockwise)

Preceding gene: 78357494

Following gene: 78357499

Centisome position: 66.42

GC content: 59.21

Gene sequence:

>1368_bases
ATGCCCCTCTTGCCACAACCGGCTGGCTCGGTTACTACGGGTAGATACACTTTCGCGGCGGCGCAGGTGCATGCACAAAC
ACTAACAGTATGCATTGTCTGTAATAACACACTCTATCCGGCCGGTTCAGCAGTCATGAGCAGAGTAAACGTCTCACTAC
TTCAATCAGGAATGATCCTATCTGAAGACGTAACGGACAGTAACGGCAGAAAACTGCTATGCGCCGGTGATGCAATTACT
GAAAAACACCTGCGGATTCTGAAGATATGGGGTGTTGCCGAAGTTGATGTGGAAGGGATTGAACCCGCCGATGCCGCCCG
CAGCGCACTGGACGGTCTTGACCCGCTGCGGGTGGAGGCCGCCGCAGCAAGGGCAACGGCCCGGTTTGCCCTGAATGATC
TGCAGTACGAACCGGTCTGCATGCTCATGCAGTGTTCCGTTGCCGCGCTGGCAAAAGGCGCGGACCCCGTCGCCCCGCTG
CCCGACTATTCGGTGCTTCCTGCTGCGCCCATGCCCTCCGCCCCGCCGGCGCTGGCCGACATGCTGCGCGACGACACGCG
GCTGGGTTCGCTTCCGCCGGTATTCCACCGTCTTGTGGATGTGGTCAACGACCCGCGCAGTTCCGCCACAGACATGGCCG
AAGTAATTGCCAACGACACAGACCTGAGCGCACGGCTGCTGCGGCTGGTGAACAGTACTTTTTACGGCCTGCGGGCCAAG
GTGGACACCATAACCCGCGCTGTTACCATCATCGGCAGCAACCAGCTCGTTTCGCTTGCCATGGGCGCGGTGATGACAAC
TTTTTTCAAGGGTCTGCCCAACAGCATTGTGGACATGCGCTCTTTCTGGGAGCATTCTGTAGCGTGCGGTGTAGCCGCAC
GGCTGCTTGCCAGCCTGCACCGCATGCCCAACACCGAACGCTTTTTTGTAGCCGGCCTGCTGCACGACATAGGGCGCCTG
GCCGTATACCGGCTGCTGCCGGAGCATTCGCTGTATATGCTGACCGAGTCGCGCCGCAGAGGTATTTCCATGCGGGCCAT
GGAACGTGAAGTACTGGGGTTCAGCCACGACAGACTGGGCGGCAGGCTGCTGAAGGAATGGCGCTGCCCCGTGTCGCTGG
AGCGCAATGTGGCGCTGCACCATACCCCCGGCAGCGGGCACGGCGGTCTGGAATCGGCCATCATCAATGTGGCCGACATT
CTGGCACATACACTGGAATTCGGCACCAGCGGTGAAGTACTTGTCCCACGGCTGGAACAGGCCGTATGGGACGCGCTGGC
CCTGCCCGCAGGCACACTGGAACAGGCTGCGGCGCAGATGGATTATCAGGTTCATGAAATTATAAGATTCTTTGAATTGG
ATGAATAA

Upstream 100 bases:

>100_bases
ACTTGCTGAGTTTCACGCACCGGCACCGCGCCGGATGCTCTGGCACGTCTACCAGAATCCGGAAGAAACCGGAAGAATGG
AAAAGCACTGCGCATGAAAA

Downstream 100 bases:

>100_bases
CGAAACGCCATTCAGTCAGGCCAACCTCAAGGCCCGTCTGCGCAGTCTGGAGGAACAGGCCAGATTCACGCTTGATGTTC
TGGAAATGGCCTCCACTCTG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: Signal Transduction Protein; HD Domain-Containing Protein; Metal-Dependent Hydrolase HDOD; Metal-Dependent Phosphoesterase; Diguanylate Cyclase; HDOD Domain Family; Response Regulator Receiver Protein; Histidine Kinase; HD Domain Protein; HD Family Protein; HDIG Domain-Containing Protein; Sensor Histidine Kinase; Chemotaxis Signal Transduction Protein; Adenylate/Guanylate Cyclase; GGDEF Domain-Containing Protein; Phosphohydrolase; Response Regulator; Response Regulator Receiver Modulated Diguanylate Cyclase; Metal Dependent Phosphohydrolase Superfamily Protein; Hdod Domain Family; CheY-Like Response Regulator; Transmembrane GGDEF Family Signalling Protein; HDIG Domain Protein; Signal Transduction Family Protein

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MPLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMILSEDVTDSNGRKLLCAGDAIT
EKHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEAAAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPL
PDYSVLPAAPMPSAPPALADMLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAK
VDTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLHRMPNTERFFVAGLLHDIGRL
AVYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLGGRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADI
LAHTLEFGTSGEVLVPRLEQAVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE

Sequences:

>Translated_455_residues
MPLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMILSEDVTDSNGRKLLCAGDAIT
EKHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEAAAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPL
PDYSVLPAAPMPSAPPALADMLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAK
VDTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLHRMPNTERFFVAGLLHDIGRL
AVYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLGGRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADI
LAHTLEFGTSGEVLVPRLEQAVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE
>Mature_454_residues
PLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMILSEDVTDSNGRKLLCAGDAITE
KHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEAAAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPLP
DYSVLPAAPMPSAPPALADMLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAKV
DTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLHRMPNTERFFVAGLLHDIGRLA
VYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLGGRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADIL
AHTLEFGTSGEVLVPRLEQAVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49260; Mature: 49129

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMIL
CCCCCCCCCCCCCCCEEEHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEE
SEDVTDSNGRKLLCAGDAITEKHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEA
ECCCCCCCCCEEEEECCHHHHHHHEEEEEECEEEECCCCCCCHHHHHHHHCCCCCHHHHH
AAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPLPDYSVLPAAPMPSAPPALAD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
MLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAK
HHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VDTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLH
HHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMPNTERFFVAGLLHDIGRLAVYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLG
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCHHHHH
GRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADILAHTLEFGTSGEVLVPRLEQ
HHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
AVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLLPQPAGSVTTGRYTFAAAQVHAQTLTVCIVCNNTLYPAGSAVMSRVNVSLLQSGMIL
CCCCCCCCCCCCCCEEEHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEE
SEDVTDSNGRKLLCAGDAITEKHLRILKIWGVAEVDVEGIEPADAARSALDGLDPLRVEA
ECCCCCCCCCEEEEECCHHHHHHHEEEEEECEEEECCCCCCCHHHHHHHHCCCCCHHHHH
AAARATARFALNDLQYEPVCMLMQCSVAALAKGADPVAPLPDYSVLPAAPMPSAPPALAD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
MLRDDTRLGSLPPVFHRLVDVVNDPRSSATDMAEVIANDTDLSARLLRLVNSTFYGLRAK
HHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VDTITRAVTIIGSNQLVSLAMGAVMTTFFKGLPNSIVDMRSFWEHSVACGVAARLLASLH
HHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMPNTERFFVAGLLHDIGRLAVYRLLPEHSLYMLTESRRRGISMRAMEREVLGFSHDRLG
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCHHHHH
GRLLKEWRCPVSLERNVALHHTPGSGHGGLESAIINVADILAHTLEFGTSGEVLVPRLEQ
HHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
AVWDALALPAGTLEQAAAQMDYQVHEIIRFFELDE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA