| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357422
Identifier: 78357422
GI number: 78357422
Start: 2403220
End: 2403771
Strand: Direct
Name: 78357422
Synonym: Dde_2379
Alternate gene names: NA
Gene position: 2403220-2403771 (Clockwise)
Preceding gene: 78357421
Following gene: 78357423
Centisome position: 64.43
GC content: 60.69
Gene sequence:
>552_bases ATGCTGATTGAAATGAAAGTTCTGGGCCTGTCGCTGGACGAGACCAGCAAAGCCCCCATACTCATCCTGCAGCAGAAGGA CGGCAAGGATGTCCTGCCCATCTGGGTGGGCGCCATGGAGGCCATGGCCATATCCATAGCCCTCAACGAGGTGGAAACGC CCCGTCCGCTCACACACGATCTCATGCTGTCCACGCTGTCTTCGCTGGGTGCCCGCCTTGTTTCCGTCAATGTGACCGGA CTGCGGGAAGGAACCTACTACGCGGAACTGGAGATCACCTGCGGCAGCACCCTTTCCAGAGTGGACTCGCGCCCGTCCGA TGCGGTGGCGCTGGCTCTGCGCGCCGGAGCCCCCATCCGCGTAAGTGATGAAGTGCTGCGGCTGGCCGAAGAGTCGCGCC TTAAACCGTCTCAGGGCGATCCCGCCCTGCTGCGCAGACCCGCTGACGCCGCTGCTTCTTTTCTCCGCCCCGAAGAAGCG GAAAAACAGTCCGACGAAGAACTGGAAGAGCTGCTGCGCAAACTGGACCCCGTCACAAGATATAAAATGTGA
Upstream 100 bases:
>100_bases TGCACCTGCCCGCACCCGCAGACCTGTACGGCAAAATAATGCCCGTCACAGTGACCGCCGCACGCAAACACTCGCTGACG GGCGAACCCGCGGGGGAATC
Downstream 100 bases:
>100_bases CCGGAGACCTTCCGGCACCGCCGGTATTCACCACAAGGACGCACGATGATAGAACTGCGAGTCTGCTCTTCTCTGAGCCG GGGAAGCATGTCTCCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MLIEMKVLGLSLDETSKAPILILQQKDGKDVLPIWVGAMEAMAISIALNEVETPRPLTHDLMLSTLSSLGARLVSVNVTG LREGTYYAELEITCGSTLSRVDSRPSDAVALALRAGAPIRVSDEVLRLAEESRLKPSQGDPALLRRPADAAASFLRPEEA EKQSDEELEELLRKLDPVTRYKM
Sequences:
>Translated_183_residues MLIEMKVLGLSLDETSKAPILILQQKDGKDVLPIWVGAMEAMAISIALNEVETPRPLTHDLMLSTLSSLGARLVSVNVTG LREGTYYAELEITCGSTLSRVDSRPSDAVALALRAGAPIRVSDEVLRLAEESRLKPSQGDPALLRRPADAAASFLRPEEA EKQSDEELEELLRKLDPVTRYKM >Mature_183_residues MLIEMKVLGLSLDETSKAPILILQQKDGKDVLPIWVGAMEAMAISIALNEVETPRPLTHDLMLSTLSSLGARLVSVNVTG LREGTYYAELEITCGSTLSRVDSRPSDAVALALRAGAPIRVSDEVLRLAEESRLKPSQGDPALLRRPADAAASFLRPEEA EKQSDEELEELLRKLDPVTRYKM
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003729 [H]
Pfam domain/function: PF02577 DUF151 [H]
EC number: NA
Molecular weight: Translated: 20023; Mature: 20023
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIEMKVLGLSLDETSKAPILILQQKDGKDVLPIWVGAMEAMAISIALNEVETPRPLTHD CEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCHHH LMLSTLSSLGARLVSVNVTGLREGTYYAELEITCGSTLSRVDSRPSDAVALALRAGAPIR HHHHHHHHHHHEEEEEEEEEEECCEEEEEEEEECCCHHHHHCCCCCCCEEEEEECCCCCE VSDEVLRLAEESRLKPSQGDPALLRRPADAAASFLRPEEAEKQSDEELEELLRKLDPVTR EHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHCCHHHH YKM CCC >Mature Secondary Structure MLIEMKVLGLSLDETSKAPILILQQKDGKDVLPIWVGAMEAMAISIALNEVETPRPLTHD CEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCHHH LMLSTLSSLGARLVSVNVTGLREGTYYAELEITCGSTLSRVDSRPSDAVALALRAGAPIR HHHHHHHHHHHEEEEEEEEEEECCEEEEEEEEECCCHHHHHCCCCCCCEEEEEECCCCCE VSDEVLRLAEESRLKPSQGDPALLRRPADAAASFLRPEEAEKQSDEELEELLRKLDPVTR EHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHCCHHHH YKM CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]