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The map label for this gene is recA

Identifier: 78357416

GI number: 78357416

Start: 2396836

End: 2397891

Strand: Direct

Name: recA

Synonym: Dde_2373

Alternate gene names: 78357416

Gene position: 2396836-2397891 (Clockwise)

Preceding gene: 78357413

Following gene: 78357417

Centisome position: 64.25

GC content: 57.29

Gene sequence:

>1056_bases
ATGTCGAAAAAAACCAGCCTCACTCCTGAGGAAATGCGCCGCGAGGCGCTGAACACCGCGCTGAGCACCATAGAACGCAA
GTATGGCTCCGGCTCGGTAATGAAACTGTCAGACGACGCGCATACCAATGTGGCTGTCATTCCTTCCGGCTCCATAGGGC
TTGACCTTGCTCTGGGAGTGGGCGGAATCCCACGCGGACGCGTTACCGAAATATATGGTCCCGAATCATCGGGTAAAACC
ACCCTTGCCCTGCACATGATCGCCGAATGCCAGAAACAGGGCGGCACGGCCGCGTTCATCGACGCAGAGCACGCGCTGGA
TATCAATTATGCCCGGCGGCTGGGCGTAAAAACCGACGAGATGCTCATCTCGCAGCCGGACTACGGCGAGCAGGCACTTG
ATATCGCCGACATGCTTGTGCGCTCCAACGCCGTGGACGTGGTGGTCATCGACTCCGTGGCGGCGCTTATTCCCCAGTCG
GAACTTGAAGGCAACATGGGTGAAACGCAGGTGGGCTCGCAGGCGCGGCTTATGTCGCATGCCATGCGCAAACTCACCGG
CACCATTCACAAATCACGCACATCTGTCATATTCATCAACCAGATCCGCATGAAAATCGGCACCATGGGGTATGGCAGCC
CGGAAACGACCACCGGCGGCAATGCACTCAAATTCTACTGCTCGGTGCGTATAGACGTGCGCAAGATACAGACCCTGAAA
GACAAGGAAGAAGTGTACGGCAACCGCGTGCGCGTAAAAATTGTCAAAAACAAGGTTGCACCGCCGTTCCGCGAAGCTCA
GTTCGATATTCTGTACGGTCAGGGTGTTTCGCGCACAGGCGAGCTGATCGATCTGGGCGTGGAAACGGGCATTGTGGAAA
AAAGCGGCGCGTGGTACGCATTCGGCTCGGAGCGTCTGGGACAGGGCAAAGAAAACGTCCGCCAGATGCTGCAGGAAAAC
ACCACCCTGCGCGAGGCTATCGAACAGAAGCTTCTTGAGCATCTGGGCATGCGTGAGCCCGTGCAGAGCGCGGACGAGGC
CGAAAAACAGGACTGA

Upstream 100 bases:

>100_bases
TGACCCTGATGCCGGACCGCCTGCGGACGTTGCCCAGCCGTCCGGCTTCTGGTATTGCCTTTGAGCCAGAAACACTTTTT
CCGTTCACGGAGTCCCACTC

Downstream 100 bases:

>100_bases
TAACAGCATCGCACCACGCCACGGCGCAGGTGCTGTGCTTTTCTGTTTGTGTTGTATAAAGTCTCTGCCGCCCCGAAAGG
GGCGGCTTTTTTGAACACAC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSKKTSLTPEEMRREALNTALSTIERKYGSGSVMKLSDDAHTNVAVIPSGSIGLDLALGVGGIPRGRVTEIYGPESSGKT
TLALHMIAECQKQGGTAAFIDAEHALDINYARRLGVKTDEMLISQPDYGEQALDIADMLVRSNAVDVVVIDSVAALIPQS
ELEGNMGETQVGSQARLMSHAMRKLTGTIHKSRTSVIFINQIRMKIGTMGYGSPETTTGGNALKFYCSVRIDVRKIQTLK
DKEEVYGNRVRVKIVKNKVAPPFREAQFDILYGQGVSRTGELIDLGVETGIVEKSGAWYAFGSERLGQGKENVRQMLQEN
TTLREAIEQKLLEHLGMREPVQSADEAEKQD

Sequences:

>Translated_351_residues
MSKKTSLTPEEMRREALNTALSTIERKYGSGSVMKLSDDAHTNVAVIPSGSIGLDLALGVGGIPRGRVTEIYGPESSGKT
TLALHMIAECQKQGGTAAFIDAEHALDINYARRLGVKTDEMLISQPDYGEQALDIADMLVRSNAVDVVVIDSVAALIPQS
ELEGNMGETQVGSQARLMSHAMRKLTGTIHKSRTSVIFINQIRMKIGTMGYGSPETTTGGNALKFYCSVRIDVRKIQTLK
DKEEVYGNRVRVKIVKNKVAPPFREAQFDILYGQGVSRTGELIDLGVETGIVEKSGAWYAFGSERLGQGKENVRQMLQEN
TTLREAIEQKLLEHLGMREPVQSADEAEKQD
>Mature_350_residues
SKKTSLTPEEMRREALNTALSTIERKYGSGSVMKLSDDAHTNVAVIPSGSIGLDLALGVGGIPRGRVTEIYGPESSGKTT
LALHMIAECQKQGGTAAFIDAEHALDINYARRLGVKTDEMLISQPDYGEQALDIADMLVRSNAVDVVVIDSVAALIPQSE
LEGNMGETQVGSQARLMSHAMRKLTGTIHKSRTSVIFINQIRMKIGTMGYGSPETTTGGNALKFYCSVRIDVRKIQTLKD
KEEVYGNRVRVKIVKNKVAPPFREAQFDILYGQGVSRTGELIDLGVETGIVEKSGAWYAFGSERLGQGKENVRQMLQENT
TLREAIEQKLLEHLGMREPVQSADEAEKQD

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=336, Percent_Identity=55.952380952381, Blast_Score=397, Evalue=1e-112,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_DESDG (Q30YS6)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_388865.1
- ProteinModelPortal:   Q30YS6
- SMR:   Q30YS6
- STRING:   Q30YS6
- GeneID:   3757389
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_2373
- NMPDR:   fig|207559.3.peg.2731
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   AISKSRA
- ProtClustDB:   PRK09354
- BioCyc:   DDES207559:DDE_2373-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38373; Mature: 38242

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKTSLTPEEMRREALNTALSTIERKYGSGSVMKLSDDAHTNVAVIPSGSIGLDLALGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCEEEEECC
GGIPRGRVTEIYGPESSGKTTLALHMIAECQKQGGTAAFIDAEHALDINYARRLGVKTDE
CCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCHHCCHHHHHHCCCCCHH
MLISQPDYGEQALDIADMLVRSNAVDVVVIDSVAALIPQSELEGNMGETQVGSQARLMSH
HEECCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHCCHHHHCCCCCCCCCCHHHHHHHH
AMRKLTGTIHKSRTSVIFINQIRMKIGTMGYGSPETTTGGNALKFYCSVRIDVRKIQTLK
HHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHH
DKEEVYGNRVRVKIVKNKVAPPFREAQFDILYGQGVSRTGELIDLGVETGIVEKSGAWYA
HHHHHCCCEEEEEEEECCCCCCHHHCCEEEEECCCCCCCCCEEEECCCCCEEECCCCEEE
FGSERLGQGKENVRQMLQENTTLREAIEQKLLEHLGMREPVQSADEAEKQD
ECCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SKKTSLTPEEMRREALNTALSTIERKYGSGSVMKLSDDAHTNVAVIPSGSIGLDLALGV
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCEEEEECC
GGIPRGRVTEIYGPESSGKTTLALHMIAECQKQGGTAAFIDAEHALDINYARRLGVKTDE
CCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCHHCCHHHHHHCCCCCHH
MLISQPDYGEQALDIADMLVRSNAVDVVVIDSVAALIPQSELEGNMGETQVGSQARLMSH
HEECCCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHCCHHHHCCCCCCCCCCHHHHHHHH
AMRKLTGTIHKSRTSVIFINQIRMKIGTMGYGSPETTTGGNALKFYCSVRIDVRKIQTLK
HHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHH
DKEEVYGNRVRVKIVKNKVAPPFREAQFDILYGQGVSRTGELIDLGVETGIVEKSGAWYA
HHHHHCCCEEEEEEEECCCCCCHHHCCEEEEECCCCCCCCCEEEECCCCCEEECCCCEEE
FGSERLGQGKENVRQMLQENTTLREAIEQKLLEHLGMREPVQSADEAEKQD
ECCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA