Click here to switch to the map view.

The map label for this gene is 78357397

Identifier: 78357397

GI number: 78357397

Start: 2377114

End: 2377608

Strand: Direct

Name: 78357397

Synonym: Dde_2354

Alternate gene names: NA

Gene position: 2377114-2377608 (Clockwise)

Preceding gene: 78357395

Following gene: 78357398

Centisome position: 63.73

GC content: 64.65

Gene sequence:

>495_bases
ATGTCTATTTCTATGCGCGTTCTGCATATTGCCGCACAGCTATGCCTGTGGTGTCTTGCCGCTGCGGCACATGCCGGCCC
CCTGCAATCTCCCGCGGCGGCTGTAATGCCCTACGCGCCGGCTGCGGCACGGGTCGTCCGCGTGGTGGACGGCGATACTC
TGATAGTAGACATAGACACCTATCCTCCGGTTTTCGGGCAGGCCATTCCCGTGCGGCTGGCGGGATGCGACACGCCGGAA
CTCAACGACCCGGACCCGCGTCTGCGGGCTCTTGCAGTGGCTGCCCGGGAATTTGTCCGGCAGGTGCTGAGCGATGCTCC
AGTGGAACTGCACGACATCGGTCGGGGGAAGTATTTCCGCATCATCGCCCGTGTGCGGGTGGCAGGGCAGGACCTGAGCA
CGCTCCTGCTGCAGGCCGGTCTTGCCGTACCCTATGCGGGCGGCAAACGTCCGGACCACAGCGTGCTGCTTACTGCCGCA
ACGGCCGCCCCCTAA

Upstream 100 bases:

>100_bases
ATCGCAACCGGCGCATACAGCGGCAGTCAACCGGCCTGTCCCGCCTGTGTGTACCGGAGCAAAACCTTGAGCAATATTCG
TCCATATATTATATATAGGC

Downstream 100 bases:

>100_bases
GCGTCTCTCCGTCACAACGACTCGTTTTTATTTGACTTTTAAAAAGAACCCATCTAATAGAACTGCACGGCGTGTCATGG
TATGATCGGAGTGCAACCCC

Product: nuclease

Products: NA

Alternate protein names: Micrococcal Nuclease-Like Protein; Nuclease Domain-Containing Protein

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSISMRVLHIAAQLCLWCLAAAAHAGPLQSPAAAVMPYAPAAARVVRVVDGDTLIVDIDTYPPVFGQAIPVRLAGCDTPE
LNDPDPRLRALAVAAREFVRQVLSDAPVELHDIGRGKYFRIIARVRVAGQDLSTLLLQAGLAVPYAGGKRPDHSVLLTAA
TAAP

Sequences:

>Translated_164_residues
MSISMRVLHIAAQLCLWCLAAAAHAGPLQSPAAAVMPYAPAAARVVRVVDGDTLIVDIDTYPPVFGQAIPVRLAGCDTPE
LNDPDPRLRALAVAAREFVRQVLSDAPVELHDIGRGKYFRIIARVRVAGQDLSTLLLQAGLAVPYAGGKRPDHSVLLTAA
TAAP
>Mature_163_residues
SISMRVLHIAAQLCLWCLAAAAHAGPLQSPAAAVMPYAPAAARVVRVVDGDTLIVDIDTYPPVFGQAIPVRLAGCDTPEL
NDPDPRLRALAVAAREFVRQVLSDAPVELHDIGRGKYFRIIARVRVAGQDLSTLLLQAGLAVPYAGGKRPDHSVLLTAAT
AAP

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17305; Mature: 17174

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISMRVLHIAAQLCLWCLAAAAHAGPLQSPAAAVMPYAPAAARVVRVVDGDTLIVDIDT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHEEEEECCCEEEEEECC
YPPVFGQAIPVRLAGCDTPELNDPDPRLRALAVAAREFVRQVLSDAPVELHDIGRGKYFR
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHH
IIARVRVAGQDLSTLLLQAGLAVPYAGGKRPDHSVLLTAATAAP
HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SISMRVLHIAAQLCLWCLAAAAHAGPLQSPAAAVMPYAPAAARVVRVVDGDTLIVDIDT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHEEEEECCCEEEEEECC
YPPVFGQAIPVRLAGCDTPELNDPDPRLRALAVAAREFVRQVLSDAPVELHDIGRGKYFR
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHH
IIARVRVAGQDLSTLLLQAGLAVPYAGGKRPDHSVLLTAATAAP
HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA