| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357378
Identifier: 78357378
GI number: 78357378
Start: 2353803
End: 2354486
Strand: Reverse
Name: 78357378
Synonym: Dde_2335
Alternate gene names: NA
Gene position: 2354486-2353803 (Counterclockwise)
Preceding gene: 78357379
Following gene: 78357377
Centisome position: 63.12
GC content: 55.41
Gene sequence:
>684_bases GTGAAGAATACCTTTTCCGTGACACCGAAGGCTGACACTCCGGTTGAAAAATGGTGGGCTCTGCGTCTGGCCGAGGCGGC GGAAAGTCTGCAGGGGAATAATTTTGAAGTTTTCGTGGCTGCCGACTGCCACGAGGCGGGAGAGGTTTTTCTCCGTGAAA TTCTGCCCGCCACCGGTGCATCCACAGTCAGTTTCGGCGGTTCCATGACGCTGGCGGCCACCGGCATAGTGGACGCCGTA CGGCAGAATCCCTCGCTTGAGGTCATTGATACTTTTGACAAGTCCGTTTCTGCCGAAGAAGCGCTGGAGCGCCGCAGACA GGCACTGCTGAGTGACCTTTTTCTTACGGGAACCAACGCCGTGACTGCCTGCGGCAAGCTGGTGAACCTTGATATGATCG GCAACCGTGTGGGGGCCATCAACTTCGGTCCCCGTCATGTGGTGCTGTTCATAGGCCGCAACAAGCTGGTTGAGGATGTG CCCGCGGCCATGGACAGAATAAAGGATTACGCTTCGCCCACCAACACCATGCGGCTTGAAAAAAAGACTCCGTGCAGGAT GACTTCGCACTGTACCGACTGCAGCAGTCCTGACAGAATATGTAATGTCTGGACCATTACGGAAAAATCGTTTCCCAAGG GCCGCATCCGTGTGGTGCTGATAAATGAAGACTGCGGGTTGTAG
Upstream 100 bases:
>100_bases GACCGCGCCTATCCGGAAACGGTGCTGGGCAAGTGGCGTCAGCGGCTTGAGTTGTACCGGAACAAGCAACCCTACAGCAG TGGGAAGTAAGGAGCAGAAA
Downstream 100 bases:
>100_bases GAGCTGTCACAGGATGTGAACCGACGACATTCAGGCCGTGTCCGCCATTGCGGGACGGCCTTTTTTTGCAGCTTCCGGCG GGCCGGATGCTGCCGAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKNTFSVTPKADTPVEKWWALRLAEAAESLQGNNFEVFVAADCHEAGEVFLREILPATGASTVSFGGSMTLAATGIVDAV RQNPSLEVIDTFDKSVSAEEALERRRQALLSDLFLTGTNAVTACGKLVNLDMIGNRVGAINFGPRHVVLFIGRNKLVEDV PAAMDRIKDYASPTNTMRLEKKTPCRMTSHCTDCSSPDRICNVWTITEKSFPKGRIRVVLINEDCGL
Sequences:
>Translated_227_residues MKNTFSVTPKADTPVEKWWALRLAEAAESLQGNNFEVFVAADCHEAGEVFLREILPATGASTVSFGGSMTLAATGIVDAV RQNPSLEVIDTFDKSVSAEEALERRRQALLSDLFLTGTNAVTACGKLVNLDMIGNRVGAINFGPRHVVLFIGRNKLVEDV PAAMDRIKDYASPTNTMRLEKKTPCRMTSHCTDCSSPDRICNVWTITEKSFPKGRIRVVLINEDCGL >Mature_227_residues MKNTFSVTPKADTPVEKWWALRLAEAAESLQGNNFEVFVAADCHEAGEVFLREILPATGASTVSFGGSMTLAATGIVDAV RQNPSLEVIDTFDKSVSAEEALERRRQALLSDLFLTGTNAVTACGKLVNLDMIGNRVGAINFGPRHVVLFIGRNKLVEDV PAAMDRIKDYASPTNTMRLEKKTPCRMTSHCTDCSSPDRICNVWTITEKSFPKGRIRVVLINEDCGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24822; Mature: 24822
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTFSVTPKADTPVEKWWALRLAEAAESLQGNNFEVFVAADCHEAGEVFLREILPATGA CCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCCC STVSFGGSMTLAATGIVDAVRQNPSLEVIDTFDKSVSAEEALERRRQALLSDLFLTGTNA CEEECCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHH VTACGKLVNLDMIGNRVGAINFGPRHVVLFIGRNKLVEDVPAAMDRIKDYASPTNTMRLE HHHHHHHEEHHHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEC KKTPCRMTSHCTDCSSPDRICNVWTITEKSFPKGRIRVVLINEDCGL CCCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MKNTFSVTPKADTPVEKWWALRLAEAAESLQGNNFEVFVAADCHEAGEVFLREILPATGA CCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCCC STVSFGGSMTLAATGIVDAVRQNPSLEVIDTFDKSVSAEEALERRRQALLSDLFLTGTNA CEEECCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHH VTACGKLVNLDMIGNRVGAINFGPRHVVLFIGRNKLVEDVPAAMDRIKDYASPTNTMRLE HHHHHHHEEHHHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEC KKTPCRMTSHCTDCSSPDRICNVWTITEKSFPKGRIRVVLINEDCGL CCCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA