| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is hisJ [H]
Identifier: 78357349
GI number: 78357349
Start: 2323411
End: 2324151
Strand: Direct
Name: hisJ [H]
Synonym: Dde_2306
Alternate gene names: 78357349
Gene position: 2323411-2324151 (Clockwise)
Preceding gene: 78357348
Following gene: 78357350
Centisome position: 62.29
GC content: 54.12
Gene sequence:
>741_bases ATGCTGAAAAAAATTTGTCTGGCCATGCTCGCCGTCATGATGACAGCCAACGTGGCACTTGCGGAACGGACCATTGTTTT TGCCCATGACGCCACCTGGCCGCCCATGGAATACATGAGCGCCGACAAAAAGGTTGTGGGCTATGCCGTTGACTACATGG ACGCGGTAGCCAAGGAAGCCGGCTTTACGGCCGAGCACCGCAATGTGGCGTGGGACGGCATTTTTGCCGGTCTTGCCAAC GGCGAATATGATGCCATCGCCTCTTCCGTTTCAATCACCGAACAGCGCAAACGCGCCATGGACTTCAGCATCCCCTACTT TGAAGTCAAACAGGCAGTGGTACTGAACAAGTCCGTCGAAGCCAAATCGTTTGCCGACCTCAAGGGCAAAACCCTCGGCG CGCAGATTGGCACCACCGGCTACTTTGCCATCAAAAAAGCAGAAGGCGTCACCCCCCGCTCTTTTGACGAAATCGGCCTT GCCATGGAAGCGCTGTACAACGGCAACATAGACGGTGTGGTCTGCGATGACCCTGTGGCCGCCAACTACGCCCTGCAGCA GGAAGAATACGCCAAGCGCCTGAAAATCGCCTTCATCGTTGAAGCCGAAGAAAAAGAATACTACGGCGTGGCTGTAAACA AAGGAAACTCCGAAGTGCTGGCCCTCATCGACAAGGGCATAAAAGCCGTGAAGGAAAAAGGCATAGAAGACCAGCTGCGC AAAAAGTGGATAGGTCAATAG
Upstream 100 bases:
>100_bases TGCAGCCATACTCCTGCCCGTGCACATTGACAACCGGCTGCAAAATGAGCCATTATACATTTTTGTCTACTCCGGCAGAA CACACAAAAGGAGAATGAGG
Downstream 100 bases:
>100_bases CCGTACGGAAGTCGAATCAACGGGACTGGTGCATCCTGCACCGGTCCTTTCATTTTGCAAGCACACGGATACACTATCAT GGCTGATCAAAAAGTCCGCA
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLKKICLAMLAVMMTANVALAERTIVFAHDATWPPMEYMSADKKVVGYAVDYMDAVAKEAGFTAEHRNVAWDGIFAGLAN GEYDAIASSVSITEQRKRAMDFSIPYFEVKQAVVLNKSVEAKSFADLKGKTLGAQIGTTGYFAIKKAEGVTPRSFDEIGL AMEALYNGNIDGVVCDDPVAANYALQQEEYAKRLKIAFIVEAEEKEYYGVAVNKGNSEVLALIDKGIKAVKEKGIEDQLR KKWIGQ
Sequences:
>Translated_246_residues MLKKICLAMLAVMMTANVALAERTIVFAHDATWPPMEYMSADKKVVGYAVDYMDAVAKEAGFTAEHRNVAWDGIFAGLAN GEYDAIASSVSITEQRKRAMDFSIPYFEVKQAVVLNKSVEAKSFADLKGKTLGAQIGTTGYFAIKKAEGVTPRSFDEIGL AMEALYNGNIDGVVCDDPVAANYALQQEEYAKRLKIAFIVEAEEKEYYGVAVNKGNSEVLALIDKGIKAVKEKGIEDQLR KKWIGQ >Mature_246_residues MLKKICLAMLAVMMTANVALAERTIVFAHDATWPPMEYMSADKKVVGYAVDYMDAVAKEAGFTAEHRNVAWDGIFAGLAN GEYDAIASSVSITEQRKRAMDFSIPYFEVKQAVVLNKSVEAKSFADLKGKTLGAQIGTTGYFAIKKAEGVTPRSFDEIGL AMEALYNGNIDGVVCDDPVAANYALQQEEYAKRLKIAFIVEAEEKEYYGVAVNKGNSEVLALIDKGIKAVKEKGIEDQLR KKWIGQ
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=250, Percent_Identity=31.6, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787088, Length=248, Percent_Identity=29.8387096774194, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1788228, Length=225, Percent_Identity=28.4444444444444, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1787031, Length=245, Percent_Identity=28.9795918367347, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788649, Length=250, Percent_Identity=24.4, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26970; Mature: 26970
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKICLAMLAVMMTANVALAERTIVFAHDATWPPMEYMSADKKVVGYAVDYMDAVAKEA CHHHHHHHHHHHHHHCCCEEHEEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHC GFTAEHRNVAWDGIFAGLANGEYDAIASSVSITEQRKRAMDFSIPYFEVKQAVVLNKSVE CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC AKSFADLKGKTLGAQIGTTGYFAIKKAEGVTPRSFDEIGLAMEALYNGNIDGVVCDDPVA HHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCC ANYALQQEEYAKRLKIAFIVEAEEKEYYGVAVNKGNSEVLALIDKGIKAVKEKGIEDQLR CCHHHHHHHHHHHEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHH KKWIGQ HHHCCC >Mature Secondary Structure MLKKICLAMLAVMMTANVALAERTIVFAHDATWPPMEYMSADKKVVGYAVDYMDAVAKEA CHHHHHHHHHHHHHHCCCEEHEEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHC GFTAEHRNVAWDGIFAGLANGEYDAIASSVSITEQRKRAMDFSIPYFEVKQAVVLNKSVE CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC AKSFADLKGKTLGAQIGTTGYFAIKKAEGVTPRSFDEIGLAMEALYNGNIDGVVCDDPVA HHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCC ANYALQQEEYAKRLKIAFIVEAEEKEYYGVAVNKGNSEVLALIDKGIKAVKEKGIEDQLR CCHHHHHHHHHHHEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHH KKWIGQ HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1448614 [H]