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The map label for this gene is ybjE [H]

Identifier: 78357348

GI number: 78357348

Start: 2322672

End: 2323274

Strand: Direct

Name: ybjE [H]

Synonym: Dde_2305

Alternate gene names: 78357348

Gene position: 2322672-2323274 (Clockwise)

Preceding gene: 78357347

Following gene: 78357349

Centisome position: 62.27

GC content: 54.23

Gene sequence:

>603_bases
ATGAAAGGTAGCCTGATTATTCTGGCTTTTTTTATAGCCGGTGCTCTGCTGGGATATTCCGGTATCACACCGGAAGTTCT
CTCCAGCGATACCGTTTCCGCGTACGCGCTGTACTTTCTGCTTTTCATCGTGGGGGTGGGCATAGGGTTCGACACCCGCT
GCTGGCGCATACTGCGCGAGATGCACATAAAGGTACTTCTGGTACCCGTGTTCATCATGCTCGGCACATTTGCCGGAGCG
CTGGCCACGGCCCCTTTCATTCCCGGCCACAGCATCCGCGATGTGCTGGCTGTGGGGGCGGGGTTCGGCTATTACAGCCT
GTCCAGCATCATGATTTCACAAATGGGTGACACAGTTCTCGGGTCCATCGCACTGCTTTCAAATATCATCAGAGAACTGA
TAACACTGCTTGCCGCGCCGCTTCTTGTAAGGTATTTCGGCAAATTAGGCCCGCTTGCCAGCGGCGGAGCCACAGCCATG
GACACCACCCTGCCGATAATCACCCGCTTCTCCGGCGAACGATACGGCATCATTGCAGTATTCAGCGGCATGTTTCTTAC
CGTTGCAGTGCCATTTATGGTATCCGCCATAATGAGCTGGTAA

Upstream 100 bases:

>100_bases
GGAATCGGTGCCAAAGCCCTGCTGATAAGCACCGGTTGCGTTGCAGGCAGTGCCGCGGCCGCGTGGTTTCTGGGCAGGTT
CATCCTGCGCGGAGGCTTTG

Downstream 100 bases:

>100_bases
CCGCAGCGTATGTCCCGTGGTGTTTTCCGGCATGATTGCAGCCATACTCCTGCCCGTGCACATTGACAACCGGCTGCAAA
ATGAGCCATTATACATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKGSLIILAFFIAGALLGYSGITPEVLSSDTVSAYALYFLLFIVGVGIGFDTRCWRILREMHIKVLLVPVFIMLGTFAGA
LATAPFIPGHSIRDVLAVGAGFGYYSLSSIMISQMGDTVLGSIALLSNIIRELITLLAAPLLVRYFGKLGPLASGGATAM
DTTLPIITRFSGERYGIIAVFSGMFLTVAVPFMVSAIMSW

Sequences:

>Translated_200_residues
MKGSLIILAFFIAGALLGYSGITPEVLSSDTVSAYALYFLLFIVGVGIGFDTRCWRILREMHIKVLLVPVFIMLGTFAGA
LATAPFIPGHSIRDVLAVGAGFGYYSLSSIMISQMGDTVLGSIALLSNIIRELITLLAAPLLVRYFGKLGPLASGGATAM
DTTLPIITRFSGERYGIIAVFSGMFLTVAVPFMVSAIMSW
>Mature_200_residues
MKGSLIILAFFIAGALLGYSGITPEVLSSDTVSAYALYFLLFIVGVGIGFDTRCWRILREMHIKVLLVPVFIMLGTFAGA
LATAPFIPGHSIRDVLAVGAGFGYYSLSSIMISQMGDTVLGSIALLSNIIRELITLLAAPLLVRYFGKLGPLASGGATAM
DTTLPIITRFSGERYGIIAVFSGMFLTVAVPFMVSAIMSW

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=163, Percent_Identity=32.5153374233129, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 21299; Mature: 21299

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSLIILAFFIAGALLGYSGITPEVLSSDTVSAYALYFLLFIVGVGIGFDTRCWRILRE
CCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MHIKVLLVPVFIMLGTFAGALATAPFIPGHSIRDVLAVGAGFGYYSLSSIMISQMGDTVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GSIALLSNIIRELITLLAAPLLVRYFGKLGPLASGGATAMDTTLPIITRFSGERYGIIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
FSGMFLTVAVPFMVSAIMSW
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGSLIILAFFIAGALLGYSGITPEVLSSDTVSAYALYFLLFIVGVGIGFDTRCWRILRE
CCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MHIKVLLVPVFIMLGTFAGALATAPFIPGHSIRDVLAVGAGFGYYSLSSIMISQMGDTVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GSIALLSNIIRELITLLAAPLLVRYFGKLGPLASGGATAMDTTLPIITRFSGERYGIIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
FSGMFLTVAVPFMVSAIMSW
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]