Click here to switch to the map view.

The map label for this gene is rsmG

Identifier: 78357336

GI number: 78357336

Start: 2312879

End: 2313568

Strand: Reverse

Name: rsmG

Synonym: Dde_2293

Alternate gene names: 78357336

Gene position: 2313568-2312879 (Counterclockwise)

Preceding gene: 78357345

Following gene: 78357332

Centisome position: 62.02

GC content: 61.74

Gene sequence:

>690_bases
ATGGCCAGACCCGCAAAACCCGCTGAAGAACCTCAGGTGGAAGCCCTGTGTTGCGAACTGGGCTTCCGGTTGCCGCCCGC
CGCCGTTACCGGACTGACAGTTTATCTTAACATGCTGCAGAAATGGAGCGCGGTGATGAATCTGGTGGGGCCGCGCACAT
GGCAGCCCATGGTGCGGACTCTGATAGTGGACAGTCTGCATCTTGACAGATTTCTGCGCGATGCAGTGCCCCAGTGCGGC
CCGCAGATATGGGATTTCGGGGCGGGGGCCGGTCTGCCGGGCATTCCGCTGCGCATGGTCTGGCAGCACGGGGAGTACCA
TATGGTGGACGTGCGCGAAAAACGCACCATGTTCATGCAGATGGTACTGGCCAGACACCCGTTGTCAGGAACCTTTGTGC
ACCGCGCCCGCGTGGAGGATTTCATGGCGGACAGGGCACCGGCTGACATGCTGGTCAGCAGGGCGTTCATGCCGTGGCCG
GAGCTGCTTTCACTGCTTGAGGGCCGGATCCGTCAGGGCGGGCATGTCATTGTGCTTGCCAACGAGCCTGCACCGGACCA
TGACCGCCCCGATGCCGCACACGGCAGGCCCCTGCCGTCCGGCTGGGACCTGACCGCGCAGTATGTCTACGAAGTGGAAG
GCTCTGCCCGTTATTTCTGGGCGTTATCTTCAAAAAAAGCGCCCAGCTGA

Upstream 100 bases:

>100_bases
GGCGGCGCTGGCAAGTGCGGGGTTGATTGCCGGCCCGTGCTGGGGTAGGTGTGCGACGGTTTTATGCCGCTATTCAATGA
GAACATGAGGATTGTGCTAT

Downstream 100 bases:

>100_bases
GAATTTTTGAAGATCAGCTTGGTGGCGGTTTTGTCGGCAAGTTCGGCCACATCCATGAAACGCTCCAGAAATTCGAGGAT
TTCATACCGGCGTTCTTCGG

Product: methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MARPAKPAEEPQVEALCCELGFRLPPAAVTGLTVYLNMLQKWSAVMNLVGPRTWQPMVRTLIVDSLHLDRFLRDAVPQCG
PQIWDFGAGAGLPGIPLRMVWQHGEYHMVDVREKRTMFMQMVLARHPLSGTFVHRARVEDFMADRAPADMLVSRAFMPWP
ELLSLLEGRIRQGGHVIVLANEPAPDHDRPDAAHGRPLPSGWDLTAQYVYEVEGSARYFWALSSKKAPS

Sequences:

>Translated_229_residues
MARPAKPAEEPQVEALCCELGFRLPPAAVTGLTVYLNMLQKWSAVMNLVGPRTWQPMVRTLIVDSLHLDRFLRDAVPQCG
PQIWDFGAGAGLPGIPLRMVWQHGEYHMVDVREKRTMFMQMVLARHPLSGTFVHRARVEDFMADRAPADMLVSRAFMPWP
ELLSLLEGRIRQGGHVIVLANEPAPDHDRPDAAHGRPLPSGWDLTAQYVYEVEGSARYFWALSSKKAPS
>Mature_228_residues
ARPAKPAEEPQVEALCCELGFRLPPAAVTGLTVYLNMLQKWSAVMNLVGPRTWQPMVRTLIVDSLHLDRFLRDAVPQCGP
QIWDFGAGAGLPGIPLRMVWQHGEYHMVDVREKRTMFMQMVLARHPLSGTFVHRARVEDFMADRAPADMLVSRAFMPWPE
LLSLLEGRIRQGGHVIVLANEPAPDHDRPDAAHGRPLPSGWDLTAQYVYEVEGSARYFWALSSKKAPS

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=153, Percent_Identity=30.718954248366, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_DESDG (Q30Z06)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_388785.1
- ProteinModelPortal:   Q30Z06
- SMR:   Q30Z06
- STRING:   Q30Z06
- GeneID:   3757304
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_2293
- NMPDR:   fig|207559.3.peg.2109
- eggNOG:   COG0357
- HOGENOM:   HBG458177
- OMA:   DIRIHEY
- BioCyc:   DDES207559:DDE_2293-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078

Pfam domain/function: PF02527 GidB

EC number: =2.1.1.170

Molecular weight: Translated: 25732; Mature: 25601

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPAKPAEEPQVEALCCELGFRLPPAAVTGLTVYLNMLQKWSAVMNLVGPRTWQPMVRT
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LIVDSLHLDRFLRDAVPQCGPQIWDFGAGAGLPGIPLRMVWQHGEYHMVDVREKRTMFMQ
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHEEEECCCEEEEEHHHHHHHHHH
MVLARHPLSGTFVHRARVEDFMADRAPADMLVSRAFMPWPELLSLLEGRIRQGGHVIVLA
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEE
NEPAPDHDRPDAAHGRPLPSGWDLTAQYVYEVEGSARYFWALSSKKAPS
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCC
>Mature Secondary Structure 
ARPAKPAEEPQVEALCCELGFRLPPAAVTGLTVYLNMLQKWSAVMNLVGPRTWQPMVRT
CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LIVDSLHLDRFLRDAVPQCGPQIWDFGAGAGLPGIPLRMVWQHGEYHMVDVREKRTMFMQ
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHEEEECCCEEEEEHHHHHHHHHH
MVLARHPLSGTFVHRARVEDFMADRAPADMLVSRAFMPWPELLSLLEGRIRQGGHVIVLA
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEE
NEPAPDHDRPDAAHGRPLPSGWDLTAQYVYEVEGSARYFWALSSKKAPS
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA