| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357256
Identifier: 78357256
GI number: 78357256
Start: 2253282
End: 2254079
Strand: Direct
Name: 78357256
Synonym: Dde_2213
Alternate gene names: NA
Gene position: 2253282-2254079 (Clockwise)
Preceding gene: 78357255
Following gene: 78357264
Centisome position: 60.41
GC content: 59.27
Gene sequence:
>798_bases ATGATTCACAGGCACTGGGCAGCTACCGGCAGGCGCGCCTTTTTATGGAACAGGGGCGCTACGAACTGGCACGGGAACAG TACCTTGTGGCACTCTCTCTTGCCCGCAATGAAGACCTGCGTGAACGCCTGCAGCATGAACTGCAGGCAGCCGACCGCAT GGTACGCAGCATGCGCTGAAATCAGCGCGGGAGATACGGACATGCATGTCAGAACATATTCATTTCATATAGCCGTCGGC CTGCTGATGCTGGCTCTGCTGCTTCCTCTTGCCGCAGCCGCCCAAAGTCTGCCCCAGACAGCTGACGCCGTGGCGCGCAG CATAGACAGCCAGCTGGCCGAACGTCTGGGCCTGTTTGAAACCCCCGTCAAAGGATACTCACTGATAGTGACCACCCCTG TGGATATAAACGATTTTGAAGCAGCCAACCCGCTGGCACGCCAGATGAGTGAAGAACTGGCGGCCTGGTTTGCTCAGGCC GGTTACAAGGTGCAGGAAATCCGCAAAAGCCGCGGCGTTATGTTTGCACCGCGCAAAGGCGAAATAATGCTTACCCGCAA ACAGCGGCTGCTTGCCAACGAAAACCTGCGCACCACCCTCATGCTGAGCGGAACCTACACGCGCACCCCGAAGCATGTCC GGTTCAACATACGACTGCTGCATGCCCCCAGCAACGAGGTGCTGGCCATGGCCAGCGGCACGCTGCCGCTCACCCGGGAG CTGCGTTCGCTGCTGGATTCGGGCCACATGTACCGCGCCACAGGATATTCACCCAGTGTAGGCACCTCGCTGCGCTGA
Upstream 100 bases:
>100_bases ATGGCCCTGTGCACGGGTGCCGTCCTGCTGACGGCAGGGTGCTCCACCATGCCGGAACAGGCCCCGCCCCCTCCTCCGCC CGCACAGGTGGTGGTGGAAT
Downstream 100 bases:
>100_bases CAACCGGCCGTACAAAAACAGACCGCCCCGTGATGCCACGGGGCGGTTTTTTGCTGTACCGTTCTCAATACATCAGCGAT GGCAACAGGGTGACAATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAEISAGDTDMHVRTYSFHIAVG LLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFETPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQA GYKVQEIRKSRGVMFAPRKGEIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE LRSLLDSGHMYRATGYSPSVGTSLR
Sequences:
>Translated_265_residues MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAEISAGDTDMHVRTYSFHIAVG LLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFETPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQA GYKVQEIRKSRGVMFAPRKGEIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE LRSLLDSGHMYRATGYSPSVGTSLR >Mature_265_residues MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAEISAGDTDMHVRTYSFHIAVG LLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFETPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQA GYKVQEIRKSRGVMFAPRKGEIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE LRSLLDSGHMYRATGYSPSVGTSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29395; Mature: 29395
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAE CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ISAGDTDMHVRTYSFHIAVGLLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFE CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC TPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQAGYKVQEIRKSRGVMFAPRKG CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEECCCCC EIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE CEEEEHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHH LRSLLDSGHMYRATGYSPSVGTSLR HHHHHHCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAE CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ISAGDTDMHVRTYSFHIAVGLLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFE CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC TPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQAGYKVQEIRKSRGVMFAPRKG CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEECCCCC EIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE CEEEEHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHH LRSLLDSGHMYRATGYSPSVGTSLR HHHHHHCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA