Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78357256

Identifier: 78357256

GI number: 78357256

Start: 2253282

End: 2254079

Strand: Direct

Name: 78357256

Synonym: Dde_2213

Alternate gene names: NA

Gene position: 2253282-2254079 (Clockwise)

Preceding gene: 78357255

Following gene: 78357264

Centisome position: 60.41

GC content: 59.27

Gene sequence:

>798_bases
ATGATTCACAGGCACTGGGCAGCTACCGGCAGGCGCGCCTTTTTATGGAACAGGGGCGCTACGAACTGGCACGGGAACAG
TACCTTGTGGCACTCTCTCTTGCCCGCAATGAAGACCTGCGTGAACGCCTGCAGCATGAACTGCAGGCAGCCGACCGCAT
GGTACGCAGCATGCGCTGAAATCAGCGCGGGAGATACGGACATGCATGTCAGAACATATTCATTTCATATAGCCGTCGGC
CTGCTGATGCTGGCTCTGCTGCTTCCTCTTGCCGCAGCCGCCCAAAGTCTGCCCCAGACAGCTGACGCCGTGGCGCGCAG
CATAGACAGCCAGCTGGCCGAACGTCTGGGCCTGTTTGAAACCCCCGTCAAAGGATACTCACTGATAGTGACCACCCCTG
TGGATATAAACGATTTTGAAGCAGCCAACCCGCTGGCACGCCAGATGAGTGAAGAACTGGCGGCCTGGTTTGCTCAGGCC
GGTTACAAGGTGCAGGAAATCCGCAAAAGCCGCGGCGTTATGTTTGCACCGCGCAAAGGCGAAATAATGCTTACCCGCAA
ACAGCGGCTGCTTGCCAACGAAAACCTGCGCACCACCCTCATGCTGAGCGGAACCTACACGCGCACCCCGAAGCATGTCC
GGTTCAACATACGACTGCTGCATGCCCCCAGCAACGAGGTGCTGGCCATGGCCAGCGGCACGCTGCCGCTCACCCGGGAG
CTGCGTTCGCTGCTGGATTCGGGCCACATGTACCGCGCCACAGGATATTCACCCAGTGTAGGCACCTCGCTGCGCTGA

Upstream 100 bases:

>100_bases
ATGGCCCTGTGCACGGGTGCCGTCCTGCTGACGGCAGGGTGCTCCACCATGCCGGAACAGGCCCCGCCCCCTCCTCCGCC
CGCACAGGTGGTGGTGGAAT

Downstream 100 bases:

>100_bases
CAACCGGCCGTACAAAAACAGACCGCCCCGTGATGCCACGGGGCGGTTTTTTGCTGTACCGTTCTCAATACATCAGCGAT
GGCAACAGGGTGACAATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAEISAGDTDMHVRTYSFHIAVG
LLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFETPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQA
GYKVQEIRKSRGVMFAPRKGEIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE
LRSLLDSGHMYRATGYSPSVGTSLR

Sequences:

>Translated_265_residues
MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAEISAGDTDMHVRTYSFHIAVG
LLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFETPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQA
GYKVQEIRKSRGVMFAPRKGEIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE
LRSLLDSGHMYRATGYSPSVGTSLR
>Mature_265_residues
MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAEISAGDTDMHVRTYSFHIAVG
LLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFETPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQA
GYKVQEIRKSRGVMFAPRKGEIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE
LRSLLDSGHMYRATGYSPSVGTSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29395; Mature: 29395

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAE
CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ISAGDTDMHVRTYSFHIAVGLLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFE
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
TPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQAGYKVQEIRKSRGVMFAPRKG
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEECCCCC
EIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE
CEEEEHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHH
LRSLLDSGHMYRATGYSPSVGTSLR
HHHHHHCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MIHRHWAATGRRAFLWNRGATNWHGNSTLWHSLLPAMKTCVNACSMNCRQPTAWYAACAE
CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ISAGDTDMHVRTYSFHIAVGLLMLALLLPLAAAAQSLPQTADAVARSIDSQLAERLGLFE
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
TPVKGYSLIVTTPVDINDFEAANPLARQMSEELAAWFAQAGYKVQEIRKSRGVMFAPRKG
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEECCCCC
EIMLTRKQRLLANENLRTTLMLSGTYTRTPKHVRFNIRLLHAPSNEVLAMASGTLPLTRE
CEEEEHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHH
LRSLLDSGHMYRATGYSPSVGTSLR
HHHHHHCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA