Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78357255

Identifier: 78357255

GI number: 78357255

Start: 2252203

End: 2253144

Strand: Direct

Name: 78357255

Synonym: Dde_2212

Alternate gene names: NA

Gene position: 2252203-2253144 (Clockwise)

Preceding gene: 78357254

Following gene: 78357256

Centisome position: 60.38

GC content: 57.01

Gene sequence:

>942_bases
ATGCTCTCTGCACTTAAGAAATACCGCCAGCTGCCGATATGCTTATCGGATGCTACTAATTCGCCGCAGGGAAGCGGCAG
AAGTATACGGAGGACATGGATGTCAATCCTGAAAAATACACTGCTGGCATGCGCCATGGCGGGAGTGCTGACGACAGCGC
CCGCAGCGCTGGCCGAAGACATGCAGCACGGCACCGGCATGGAAGGCTTTAATACCGGCACGGCGTTGCGGGTGCAGAAT
CCGCAGGGCGACCACACGCTGGTACAGGGCGGCAGAACCACCCTGCGCACCGTGCACGGGCTGCCCCGCGGAGTTGTGGT
GTCCGACGGCAACAACGGTCTTGTGCACATCACCGAAGACCGTGCCGTGCAGCCGCCTTCGCCTGAATACGACGACGCCC
GTGAGCTCAAACTGAAAATACGAGAACTGGCGGATCAGCTGCTGGAAGGCAAGGCGGAAAAAGCGCTGAGAGGCGTTGCC
GCACTGCCTGCTTCTTTTGTCAATCAGGACAATTTCGAGCAGAGCTCATCCTTTGGCAGATATATTGCCGAACAGCTGTT
CTACGAATTCAACCAGCGGGGCTTTCCCGTACGGGAATACCGGCTTCAGCAAGGCATAGCCACACGCCGAGCCGAAGGGG
AATTCATTCTCTCGCGCGGCAATCAGGTCATCGCGGCTTCTCCCGCCGCCAATATTTATCTGACAGGCACATACTACCGC
GACAGATACAGTGTATTCGTCAACGCGCGGCTTATCAGAGCGTCCGACGGCCTTGTGCTGCGCACGGGACAGCTGGTGTT
TCCGGTAACCGGTGTCACCAGACGCATGCTGGCATCCACGGATGTAAAGCTGGAATCCACCTATGTCGGCATGCAGGATT
TTGAAATAATGACCCGCGCCACTGATCTGACAAGTATCGACCTTGGCGACGACATTCATTAA

Upstream 100 bases:

>100_bases
GCCTGCTCCAAAAGACAGACTGACCATTCCTGACATACAAAGGCCCCCGCGGGCCTTTGTTTCTTTATGACCTCCGCATT
TTCTGCACCGGCATATCCGG

Downstream 100 bases:

>100_bases
CGGAGCAGCCATGCGCAACAGCAAAGTCGCAATCATCATGGCCCTGTGCACGGGTGCCGTCCTGCTGACGGCAGGGTGCT
CCACCATGCCGGAACAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLSALKKYRQLPICLSDATNSPQGSGRSIRRTWMSILKNTLLACAMAGVLTTAPAALAEDMQHGTGMEGFNTGTALRVQN
PQGDHTLVQGGRTTLRTVHGLPRGVVVSDGNNGLVHITEDRAVQPPSPEYDDARELKLKIRELADQLLEGKAEKALRGVA
ALPASFVNQDNFEQSSSFGRYIAEQLFYEFNQRGFPVREYRLQQGIATRRAEGEFILSRGNQVIAASPAANIYLTGTYYR
DRYSVFVNARLIRASDGLVLRTGQLVFPVTGVTRRMLASTDVKLESTYVGMQDFEIMTRATDLTSIDLGDDIH

Sequences:

>Translated_313_residues
MLSALKKYRQLPICLSDATNSPQGSGRSIRRTWMSILKNTLLACAMAGVLTTAPAALAEDMQHGTGMEGFNTGTALRVQN
PQGDHTLVQGGRTTLRTVHGLPRGVVVSDGNNGLVHITEDRAVQPPSPEYDDARELKLKIRELADQLLEGKAEKALRGVA
ALPASFVNQDNFEQSSSFGRYIAEQLFYEFNQRGFPVREYRLQQGIATRRAEGEFILSRGNQVIAASPAANIYLTGTYYR
DRYSVFVNARLIRASDGLVLRTGQLVFPVTGVTRRMLASTDVKLESTYVGMQDFEIMTRATDLTSIDLGDDIH
>Mature_313_residues
MLSALKKYRQLPICLSDATNSPQGSGRSIRRTWMSILKNTLLACAMAGVLTTAPAALAEDMQHGTGMEGFNTGTALRVQN
PQGDHTLVQGGRTTLRTVHGLPRGVVVSDGNNGLVHITEDRAVQPPSPEYDDARELKLKIRELADQLLEGKAEKALRGVA
ALPASFVNQDNFEQSSSFGRYIAEQLFYEFNQRGFPVREYRLQQGIATRRAEGEFILSRGNQVIAASPAANIYLTGTYYR
DRYSVFVNARLIRASDGLVLRTGQLVFPVTGVTRRMLASTDVKLESTYVGMQDFEIMTRATDLTSIDLGDDIH

Specific function: Unknown

COG id: COG5616

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34458; Mature: 34458

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSALKKYRQLPICLSDATNSPQGSGRSIRRTWMSILKNTLLACAMAGVLTTAPAALAED
CCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
MQHGTGMEGFNTGTALRVQNPQGDHTLVQGGRTTLRTVHGLPRGVVVSDGNNGLVHITED
HHHCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHHCCCCCEEEECCCCCEEEEECC
RAVQPPSPEYDDARELKLKIRELADQLLEGKAEKALRGVAALPASFVNQDNFEQSSSFGR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHH
YIAEQLFYEFNQRGFPVREYRLQQGIATRRAEGEFILSRGNQVIAASPAANIYLTGTYYR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCEEEEEEEEEC
DRYSVFVNARLIRASDGLVLRTGQLVFPVTGVTRRMLASTDVKLESTYVGMQDFEIMTRA
CEEEEEEEEEEEEECCCEEEEECCEEEECHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
TDLTSIDLGDDIH
CCCEEECCCCCCC
>Mature Secondary Structure
MLSALKKYRQLPICLSDATNSPQGSGRSIRRTWMSILKNTLLACAMAGVLTTAPAALAED
CCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
MQHGTGMEGFNTGTALRVQNPQGDHTLVQGGRTTLRTVHGLPRGVVVSDGNNGLVHITED
HHHCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHHCCCCCEEEECCCCCEEEEECC
RAVQPPSPEYDDARELKLKIRELADQLLEGKAEKALRGVAALPASFVNQDNFEQSSSFGR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHH
YIAEQLFYEFNQRGFPVREYRLQQGIATRRAEGEFILSRGNQVIAASPAANIYLTGTYYR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCEEEEEEEEEC
DRYSVFVNARLIRASDGLVLRTGQLVFPVTGVTRRMLASTDVKLESTYVGMQDFEIMTRA
CEEEEEEEEEEEEECCCEEEEECCEEEECHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
TDLTSIDLGDDIH
CCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA