| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357203
Identifier: 78357203
GI number: 78357203
Start: 2205113
End: 2205607
Strand: Direct
Name: 78357203
Synonym: Dde_2160
Alternate gene names: NA
Gene position: 2205113-2205607 (Clockwise)
Preceding gene: 78357202
Following gene: 78357205
Centisome position: 59.11
GC content: 58.99
Gene sequence:
>495_bases GTGGCAACACTACCTGCCGGCGGCAACTGCACCAGCGTAAAAGGCGGCCTCATGGTCAGTCCCCGAAGAATACTGACGTT CATCCTGCTTATGGCAGCCGCGACAGCATGTTCCGCTGCGCCGCCTCAGGAATCATCCATGCTGCCGCAGTGTCCTGACC GTCCCAACTGCGTCAGTTCCCTGCAGCAGGGCACAAGCCACGCCGTGCCTCCCATGGCGTTGCACGGCACCACAGAAGCT GCAATGGAGACTGCGGAACAGATCCTGCGGCAGATGGGCGCGGCATCAGTCAGCAAAACAGAAAACGGAATCCATGCTGT CTTCCGCAGCAGAATTTTCGGCTTCAAAGACGACATGCATATTGTCGCTGATTCCTCGCAAGGACTTCTGCATATCAGGT CCGCTTCGCGAACCGGTTATTATGATTTCGGCGTCAACCGGCGGCGGGCACTGGATTTTGCCGCACGCTATGCCGACGCC ACCCGCAGGCCCTGA
Upstream 100 bases:
>100_bases GGCAGGCAGGCCCGGGCAAAAAGCGCTCAGGCCGGAAAAATTCCGGCGGGCAGAAAAAACATGCAGCAGATGAATTTACC AAGTTCTGAACCGCAGGCGC
Downstream 100 bases:
>100_bases ACCTGAAATGCGGCGGTCAGTACCATATTCCACCCAACCGCCATCTGGGGCGCAGTATCTGCCGGACCGGCACCTGCACC GGCTGCGTGTACCGGACATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MATLPAGGNCTSVKGGLMVSPRRILTFILLMAAATACSAAPPQESSMLPQCPDRPNCVSSLQQGTSHAVPPMALHGTTEA AMETAEQILRQMGAASVSKTENGIHAVFRSRIFGFKDDMHIVADSSQGLLHIRSASRTGYYDFGVNRRRALDFAARYADA TRRP
Sequences:
>Translated_164_residues MATLPAGGNCTSVKGGLMVSPRRILTFILLMAAATACSAAPPQESSMLPQCPDRPNCVSSLQQGTSHAVPPMALHGTTEA AMETAEQILRQMGAASVSKTENGIHAVFRSRIFGFKDDMHIVADSSQGLLHIRSASRTGYYDFGVNRRRALDFAARYADA TRRP >Mature_163_residues ATLPAGGNCTSVKGGLMVSPRRILTFILLMAAATACSAAPPQESSMLPQCPDRPNCVSSLQQGTSHAVPPMALHGTTEAA METAEQILRQMGAASVSKTENGIHAVFRSRIFGFKDDMHIVADSSQGLLHIRSASRTGYYDFGVNRRRALDFAARYADAT RRP
Specific function: Unknown
COG id: COG4446
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17566; Mature: 17435
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLPAGGNCTSVKGGLMVSPRRILTFILLMAAATACSAAPPQESSMLPQCPDRPNCVSS CCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LQQGTSHAVPPMALHGTTEAAMETAEQILRQMGAASVSKTENGIHAVFRSRIFGFKDDMH HHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCEE IVADSSQGLLHIRSASRTGYYDFGVNRRRALDFAARYADATRRP EEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATLPAGGNCTSVKGGLMVSPRRILTFILLMAAATACSAAPPQESSMLPQCPDRPNCVSS CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LQQGTSHAVPPMALHGTTEAAMETAEQILRQMGAASVSKTENGIHAVFRSRIFGFKDDMH HHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCEE IVADSSQGLLHIRSASRTGYYDFGVNRRRALDFAARYADATRRP EEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA