| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is prs [H]
Identifier: 78357169
GI number: 78357169
Start: 2175261
End: 2176202
Strand: Direct
Name: prs [H]
Synonym: Dde_2126
Alternate gene names: 78357169
Gene position: 2175261-2176202 (Clockwise)
Preceding gene: 78357168
Following gene: 78357170
Centisome position: 58.31
GC content: 55.52
Gene sequence:
>942_bases ATGCATGGCGATTTAAAAATTATTACCGGCACCGCCAATCCGGAATTAGCCAGCGCCATATGCAACCACCTCGGCTGCCA TCTGACCCCCACGCTGTGCGAAACATTCAGTGACGGTGAAATCAGAATCGAAATAGGCGACAATGTTCGCGGAGATGATG TTTTCATCGTCCAGCCGACTTGCGCTCCTGTCAACGACAACCTGATTCAGCTCAGCCTGATGCTTGACGCTCTGAAAAGA GCCAGTGTCGGACGTGTGACTGCGGTTGTCCCCTACTACGGGTACGCCCGTCAGGACCGCAAGGTCAGCCCGCGCGCTCC CATCAGCGCCAGACTGATGGCGGACCTGCTGGAAGCTGCGGGGATGCACCGGCTTGTCACGGTGGATCTGCACGCGGGAC AGATTCAGGGATTTTTCAACTGTCCGGTGGACAACCTGTACGCCGCACCTGTCATTCTTGACTACCTGCGTCAGACTGTC ACCAACGACATTGTTATCGTATCGCCCGATGCGGGCGGTGTGGAACGCGCACGCGCCTATGCCAAACGTCTGGGCGCTTC TCTTGCAATCATCGACAAACGACGCGATAAACCAAATCAGGCCGAGGCCATGAACGTTATCGGCGAAGTGAAAGGCAAAA CAGCCATTGTCGTTGATGATATGATCGACACAGCCGGCACCATGGTAGCCGCAGGCAATGTTCTGCTTACCAAGGGAGCC AAGGAAGTGATGGCTTGCACAACGCACCCTGTCCTGTCCGGACCGGCCATTGAGCGGCTCTGCGAATCTTCTTTCTCGCA GGTGGTTGTCACCGACACCATTCCGCTCGGGTCCAAACTTCAGGCATGCAGCAAACTGAAGGTACTTTCCGTTGCGGGAT TGCTGGCAAAGGCCATCCATAATATCCACACGGAATCGTCCGTCAGCGTGCTTTTTGTGTAG
Upstream 100 bases:
>100_bases GTAAGGCAACGGGTTTTGGTCCCGTCATTCGAGGGTTCAAGTCCTTCCGCCCCTGCCATTTTTTTTGCGTGAACCATAAA AAAGTCCCGGATCTATTACC
Downstream 100 bases:
>100_bases CCTGTAAACACCGTATCACACGCGCAGCCAATAAGCGCGACGTTTTTTGAAAGGAGAGAACTTATGTCCCAGCAGATGAC ACTGAGCGTCCAGAAGCGTG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MHGDLKIITGTANPELASAICNHLGCHLTPTLCETFSDGEIRIEIGDNVRGDDVFIVQPTCAPVNDNLIQLSLMLDALKR ASVGRVTAVVPYYGYARQDRKVSPRAPISARLMADLLEAAGMHRLVTVDLHAGQIQGFFNCPVDNLYAAPVILDYLRQTV TNDIVIVSPDAGGVERARAYAKRLGASLAIIDKRRDKPNQAEAMNVIGEVKGKTAIVVDDMIDTAGTMVAAGNVLLTKGA KEVMACTTHPVLSGPAIERLCESSFSQVVVTDTIPLGSKLQACSKLKVLSVAGLLAKAIHNIHTESSVSVLFV
Sequences:
>Translated_313_residues MHGDLKIITGTANPELASAICNHLGCHLTPTLCETFSDGEIRIEIGDNVRGDDVFIVQPTCAPVNDNLIQLSLMLDALKR ASVGRVTAVVPYYGYARQDRKVSPRAPISARLMADLLEAAGMHRLVTVDLHAGQIQGFFNCPVDNLYAAPVILDYLRQTV TNDIVIVSPDAGGVERARAYAKRLGASLAIIDKRRDKPNQAEAMNVIGEVKGKTAIVVDDMIDTAGTMVAAGNVLLTKGA KEVMACTTHPVLSGPAIERLCESSFSQVVVTDTIPLGSKLQACSKLKVLSVAGLLAKAIHNIHTESSVSVLFV >Mature_313_residues MHGDLKIITGTANPELASAICNHLGCHLTPTLCETFSDGEIRIEIGDNVRGDDVFIVQPTCAPVNDNLIQLSLMLDALKR ASVGRVTAVVPYYGYARQDRKVSPRAPISARLMADLLEAAGMHRLVTVDLHAGQIQGFFNCPVDNLYAAPVILDYLRQTV TNDIVIVSPDAGGVERARAYAKRLGASLAIIDKRRDKPNQAEAMNVIGEVKGKTAIVVDDMIDTAGTMVAAGNVLLTKGA KEVMACTTHPVLSGPAIERLCESSFSQVVVTDTIPLGSKLQACSKLKVLSVAGLLAKAIHNIHTESSVSVLFV
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=311, Percent_Identity=47.2668810289389, Blast_Score=302, Evalue=3e-82, Organism=Homo sapiens, GI4506129, Length=311, Percent_Identity=45.6591639871383, Blast_Score=298, Evalue=3e-81, Organism=Homo sapiens, GI84875539, Length=314, Percent_Identity=45.2229299363057, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI28557709, Length=311, Percent_Identity=45.016077170418, Blast_Score=287, Evalue=9e-78, Organism=Homo sapiens, GI194018537, Length=332, Percent_Identity=35.8433734939759, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI4506133, Length=346, Percent_Identity=32.6589595375723, Blast_Score=175, Evalue=4e-44, Organism=Homo sapiens, GI310128524, Length=147, Percent_Identity=29.9319727891156, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI310115209, Length=147, Percent_Identity=29.9319727891156, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI310118259, Length=147, Percent_Identity=29.9319727891156, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI310119946, Length=147, Percent_Identity=29.9319727891156, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1787458, Length=311, Percent_Identity=50.1607717041801, Blast_Score=325, Evalue=3e-90, Organism=Caenorhabditis elegans, GI25149168, Length=311, Percent_Identity=45.9807073954984, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI17554702, Length=311, Percent_Identity=45.9807073954984, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI71989924, Length=311, Percent_Identity=45.9807073954984, Blast_Score=295, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17554704, Length=308, Percent_Identity=46.1038961038961, Blast_Score=293, Evalue=8e-80, Organism=Caenorhabditis elegans, GI17570245, Length=335, Percent_Identity=32.5373134328358, Blast_Score=182, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6321776, Length=310, Percent_Identity=43.8709677419355, Blast_Score=267, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6320946, Length=311, Percent_Identity=42.7652733118971, Blast_Score=260, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6319403, Length=312, Percent_Identity=41.3461538461538, Blast_Score=251, Evalue=8e-68, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=38.265306122449, Blast_Score=155, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6324511, Length=86, Percent_Identity=50, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI21355239, Length=311, Percent_Identity=46.3022508038585, Blast_Score=293, Evalue=1e-79, Organism=Drosophila melanogaster, GI45551540, Length=334, Percent_Identity=43.1137724550898, Blast_Score=280, Evalue=8e-76, Organism=Drosophila melanogaster, GI24651458, Length=357, Percent_Identity=32.2128851540616, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24651456, Length=357, Percent_Identity=32.2128851540616, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI281362873, Length=357, Percent_Identity=32.2128851540616, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24651454, Length=357, Percent_Identity=32.2128851540616, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24651462, Length=376, Percent_Identity=30.8510638297872, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24651464, Length=376, Percent_Identity=30.8510638297872, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI45552010, Length=376, Percent_Identity=30.8510638297872, Blast_Score=180, Evalue=9e-46,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 33379; Mature: 33379
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGDLKIITGTANPELASAICNHLGCHLTPTLCETFSDGEIRIEIGDNVRGDDVFIVQPT CCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECCCCCCCEEEEECCC CAPVNDNLIQLSLMLDALKRASVGRVTAVVPYYGYARQDRKVSPRAPISARLMADLLEAA CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC GMHRLVTVDLHAGQIQGFFNCPVDNLYAAPVILDYLRQTVTNDIVIVSPDAGGVERARAY CCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH AKRLGASLAIIDKRRDKPNQAEAMNVIGEVKGKTAIVVDDMIDTAGTMVAAGNVLLTKGA HHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCCEEECCCEEEECCC KEVMACTTHPVLSGPAIERLCESSFSQVVVTDTIPLGSKLQACSKLKVLSVAGLLAKAIH HHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH NIHTESSVSVLFV HHCCCCCEEEEEC >Mature Secondary Structure MHGDLKIITGTANPELASAICNHLGCHLTPTLCETFSDGEIRIEIGDNVRGDDVFIVQPT CCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECCCCCCCEEEEECCC CAPVNDNLIQLSLMLDALKRASVGRVTAVVPYYGYARQDRKVSPRAPISARLMADLLEAA CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC GMHRLVTVDLHAGQIQGFFNCPVDNLYAAPVILDYLRQTVTNDIVIVSPDAGGVERARAY CCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH AKRLGASLAIIDKRRDKPNQAEAMNVIGEVKGKTAIVVDDMIDTAGTMVAAGNVLLTKGA HHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCCEEECCCEEEECCC KEVMACTTHPVLSGPAIERLCESSFSQVVVTDTIPLGSKLQACSKLKVLSVAGLLAKAIH HHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH NIHTESSVSVLFV HHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA