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The map label for this gene is ccsA [H]

Identifier: 78357067

GI number: 78357067

Start: 2063712

End: 2064536

Strand: Direct

Name: ccsA [H]

Synonym: Dde_2024

Alternate gene names: 78357067

Gene position: 2063712-2064536 (Clockwise)

Preceding gene: 78357066

Following gene: 78357068

Centisome position: 55.32

GC content: 53.45

Gene sequence:

>825_bases
ATGAGCTTGCTTAAGCTGCTTACCCTGACCATTATCGTGCTCTACTTTCTGGGCACCTGTGTCGAGCTGTTCGGGCTGGT
TACACGCCGCCAGCGAGTGACAAAGGCGGCATCGTGGCTTACCGTTGCCGGTTTCGGCGTGCATACCCTGCTGCTGGTCT
TCAACATTCTCGACTCTTCATGGGCCGAAATGACCAAAGGGTATTACATGCAGATGCTCTCTTGGAGCATGCTGCTCATC
TATTTCATCATATGGTGGAGAATGCGTCTGGCCTTTCTGGCCATCACGGCCGCACCGCTGGCTCTGTTGCTGTTCATTTC
CTCGTTGCGCATCACGGTGGTCCAGTCGGCTTTTCCGGCTTCCATGTCCGGCCTGTTTTTCAGTCTGCACATCGGGTCGC
TTTTTCTCAGCCTCGGCTTGATGACCATGGCCTTCGGGGCGGGGCTCATATTCCTTTACCTTGACAAAAAAATTAAAAAC
AAGGACAGGTTAAGCGGTTTTGCAAAAGACCTTCCTTCGCTCAACGCCTTTGACAGAGTAAACCATGTAGCCGTCATGTC
CGGCTTTCCGCTGTACACACTGGGCATGGCCAGCGGTTTCATTTGGGGGCACATCCAATGGGGACGTGCCATCACATGGG
ACCCCAAGGAAATGGTTTCTCTTGTGGTCTGGTTTCTGTTCGCCCTGCTTTTCCATCATCGGCTGGCACTGGGCTGGAGA
GGCCGAAAGGCGGCAGTATTGGCCGTCTGGCTCTTTGCCCTAACCGTGTTTTCGCTTGTCGGCGTTAACTATTTCATGCC
CACACACCACAGCTTTCAGCAGTAA

Upstream 100 bases:

>100_bases
CTCGCAGAAATGCTCCGGCATAACCGCAACACAGAAGCAGAAGCTCTTTTACGGAATCTGCTTCCCGAACAATTGCACAA
CAGAATCGGAGAGTTGCTGA

Downstream 100 bases:

>100_bases
ATCATGGATCAGGAAATATTCATCATCGGTTTGAACCACCGTACCGCCGACGTGGAAGTACGCGAAAAGTTTGCGCTTAC
AGGCTGTACTTCTCTGGAAC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSLLKLLTLTIIVLYFLGTCVELFGLVTRRQRVTKAASWLTVAGFGVHTLLLVFNILDSSWAEMTKGYYMQMLSWSMLLI
YFIIWWRMRLAFLAITAAPLALLLFISSLRITVVQSAFPASMSGLFFSLHIGSLFLSLGLMTMAFGAGLIFLYLDKKIKN
KDRLSGFAKDLPSLNAFDRVNHVAVMSGFPLYTLGMASGFIWGHIQWGRAITWDPKEMVSLVVWFLFALLFHHRLALGWR
GRKAAVLAVWLFALTVFSLVGVNYFMPTHHSFQQ

Sequences:

>Translated_274_residues
MSLLKLLTLTIIVLYFLGTCVELFGLVTRRQRVTKAASWLTVAGFGVHTLLLVFNILDSSWAEMTKGYYMQMLSWSMLLI
YFIIWWRMRLAFLAITAAPLALLLFISSLRITVVQSAFPASMSGLFFSLHIGSLFLSLGLMTMAFGAGLIFLYLDKKIKN
KDRLSGFAKDLPSLNAFDRVNHVAVMSGFPLYTLGMASGFIWGHIQWGRAITWDPKEMVSLVVWFLFALLFHHRLALGWR
GRKAAVLAVWLFALTVFSLVGVNYFMPTHHSFQQ
>Mature_273_residues
SLLKLLTLTIIVLYFLGTCVELFGLVTRRQRVTKAASWLTVAGFGVHTLLLVFNILDSSWAEMTKGYYMQMLSWSMLLIY
FIIWWRMRLAFLAITAAPLALLLFISSLRITVVQSAFPASMSGLFFSLHIGSLFLSLGLMTMAFGAGLIFLYLDKKIKNK
DRLSGFAKDLPSLNAFDRVNHVAVMSGFPLYTLGMASGFIWGHIQWGRAITWDPKEMVSLVVWFLFALLFHHRLALGWRG
RKAAVLAVWLFALTVFSLVGVNYFMPTHHSFQQ

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 31050; Mature: 30919

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLKLLTLTIIVLYFLGTCVELFGLVTRRQRVTKAASWLTVAGFGVHTLLLVFNILDSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAEMTKGYYMQMLSWSMLLIYFIIWWRMRLAFLAITAAPLALLLFISSLRITVVQSAFPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SMSGLFFSLHIGSLFLSLGLMTMAFGAGLIFLYLDKKIKNKDRLSGFAKDLPSLNAFDRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHCCCCCHHHHH
NHVAVMSGFPLYTLGMASGFIWGHIQWGRAITWDPKEMVSLVVWFLFALLFHHRLALGWR
HHHHHHCCCCHHHHHHHCCHHEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GRKAAVLAVWLFALTVFSLVGVNYFMPTHHSFQQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLLKLLTLTIIVLYFLGTCVELFGLVTRRQRVTKAASWLTVAGFGVHTLLLVFNILDSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAEMTKGYYMQMLSWSMLLIYFIIWWRMRLAFLAITAAPLALLLFISSLRITVVQSAFPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SMSGLFFSLHIGSLFLSLGLMTMAFGAGLIFLYLDKKIKNKDRLSGFAKDLPSLNAFDRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHCCCCCHHHHH
NHVAVMSGFPLYTLGMASGFIWGHIQWGRAITWDPKEMVSLVVWFLFALLFHHRLALGWR
HHHHHHCCCCHHHHHHHCCHHEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GRKAAVLAVWLFALTVFSLVGVNYFMPTHHSFQQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA