| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78357042
Identifier: 78357042
GI number: 78357042
Start: 2042423
End: 2043073
Strand: Direct
Name: 78357042
Synonym: Dde_1999
Alternate gene names: NA
Gene position: 2042423-2043073 (Clockwise)
Preceding gene: 304570584
Following gene: 78357043
Centisome position: 54.75
GC content: 54.07
Gene sequence:
>651_bases ATGCCGGCAATACGTTACAGTGTTATCACACCCAGCCGCGGCGACCGTCCCGCAGCACTCGCACACGCCATAGACAGTGT TTTCGCAGCGGCAGACAACGCCGCATTGCCGCATGAACAGATTGAGGTGCTGGTTGGCTTTGACGGGGTGAAGGGCAGAC GCGTGCATACCTCTTCAAGTATCCGCTATTATGACTTCCCTGCGGATAACGACTACGGAAACGCCATAAGAAACGGTCTG CTGAAAGCCTCCAAGGGGACGAAAGTGCTGTTTCTAGATGACGATAATGCTCTGACAGAACAGGCATTTGCCGTATACGA ATGTTTTACGCACATAGAGATGCTCGTGGCACGCATCGATATCAGCAGGGCTCACCCGAAGCCGTGGATTCCCGTAATCG AGCAAGGTAAGGAGCCATTCTTTCAGGGGAACGTCGACCCGCTCTGTCTCTGCCTTTCACGCGAGCTTGTGACTGTGCGC TGCGGTGGCTGGCTGGGCACTGGTTACGAAGCAGACTATCTCAACATGTTCCGTTATTTCAGGCGGACAAAGAGTATTCA CTACACGGAAAAACTTGTCGGAATATACGACGCAGGACGAGGGCTTGATGACGGCGCGCTGAACTTCCGCCAGCAGGCAC TGCTTTCCTGA
Upstream 100 bases:
>100_bases ACTATGCCGGCAATACGTTACAGAGAAAACGGCCATGAACAAAGGATGGCCGCGTGGTGGCGCCGTCTGCGCAGGCCCCG CCGTACAGGAAAATAGCACT
Downstream 100 bases:
>100_bases CAGACCATGGAGATACCAATGAAAAAAATCATGCTGTTTCTGGCTGTAGCTTATTGCGCCTTCATGCTGAACGGCTGTGC CGTTTATAAAGCCAGCGTGG
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MPAIRYSVITPSRGDRPAALAHAIDSVFAAADNAALPHEQIEVLVGFDGVKGRRVHTSSSIRYYDFPADNDYGNAIRNGL LKASKGTKVLFLDDDNALTEQAFAVYECFTHIEMLVARIDISRAHPKPWIPVIEQGKEPFFQGNVDPLCLCLSRELVTVR CGGWLGTGYEADYLNMFRYFRRTKSIHYTEKLVGIYDAGRGLDDGALNFRQQALLS
Sequences:
>Translated_216_residues MPAIRYSVITPSRGDRPAALAHAIDSVFAAADNAALPHEQIEVLVGFDGVKGRRVHTSSSIRYYDFPADNDYGNAIRNGL LKASKGTKVLFLDDDNALTEQAFAVYECFTHIEMLVARIDISRAHPKPWIPVIEQGKEPFFQGNVDPLCLCLSRELVTVR CGGWLGTGYEADYLNMFRYFRRTKSIHYTEKLVGIYDAGRGLDDGALNFRQQALLS >Mature_215_residues PAIRYSVITPSRGDRPAALAHAIDSVFAAADNAALPHEQIEVLVGFDGVKGRRVHTSSSIRYYDFPADNDYGNAIRNGLL KASKGTKVLFLDDDNALTEQAFAVYECFTHIEMLVARIDISRAHPKPWIPVIEQGKEPFFQGNVDPLCLCLSRELVTVRC GGWLGTGYEADYLNMFRYFRRTKSIHYTEKLVGIYDAGRGLDDGALNFRQQALLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24104; Mature: 23972
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIRYSVITPSRGDRPAALAHAIDSVFAAADNAALPHEQIEVLVGFDGVKGRRVHTSSS CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCCEEECCCC IRYYDFPADNDYGNAIRNGLLKASKGTKVLFLDDDNALTEQAFAVYECFTHIEMLVARID EEEEECCCCCCHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ISRAHPKPWIPVIEQGKEPFFQGNVDPLCLCLSRELVTVRCGGWLGTGYEADYLNMFRYF HHCCCCCCCCHHHHCCCCCCCCCCCCHHHHEECCCEEEEEECCEECCCCCHHHHHHHHHH RRTKSIHYTEKLVGIYDAGRGLDDGALNFRQQALLS HHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure PAIRYSVITPSRGDRPAALAHAIDSVFAAADNAALPHEQIEVLVGFDGVKGRRVHTSSS CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCCEEECCCC IRYYDFPADNDYGNAIRNGLLKASKGTKVLFLDDDNALTEQAFAVYECFTHIEMLVARID EEEEECCCCCCHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ISRAHPKPWIPVIEQGKEPFFQGNVDPLCLCLSRELVTVRCGGWLGTGYEADYLNMFRYF HHCCCCCCCCHHHHCCCCCCCCCCCCHHHHEECCCEEEEEECCEECCCCCHHHHHHHHHH RRTKSIHYTEKLVGIYDAGRGLDDGALNFRQQALLS HHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA