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The map label for this gene is ypdP [H]

Identifier: 78356876

GI number: 78356876

Start: 1882711

End: 1883397

Strand: Reverse

Name: ypdP [H]

Synonym: Dde_1833

Alternate gene names: 78356876

Gene position: 1883397-1882711 (Counterclockwise)

Preceding gene: 78356877

Following gene: 78356874

Centisome position: 50.49

GC content: 50.95

Gene sequence:

>687_bases
TTGAACGAATTACTTTGGATCGGGTTTGCTTTTCTTGATCTTACGCTGACGTTGCTGCTCTACCGTTTTTTCGGCAGAGC
CGGCATCTACGGCGTCATTGTTTTTAACCTGCTGCTCTGCAATATTCAGGTGCTGAAGACCGTTACGCTTTTCGGGCTGA
CAACCACGCTGGGCAACATTCTGTATGCCGGTGTTTTTCTGGCAACAGACATGCTGAGCGAGTTTTACGGCCGCAAGGAA
GCACAGCGGGGGGTTCTGCTGGGATTCACTGTTGTTGTGCTGGCCACGCTGTATATGCAGATAGCGTTACTTTTCTCGCC
CGCCGAGGGCGATTTTGCCCAGCCCCATCTTTCAGCCATTTTCGGGCTTCTTCCGCGGCTGGCCATAGCCAGTATCTGCG
CGTATCTGATTTCACAGATGCACGATGTGTGGGCCTTTGAATTCTGGAAAAAGAAAACTCAGGGCCGTTTTCTGTGGCTG
AGAAACAATGCAAGTACTCTTGTAAGTCAGCTTCTTGATTCCGCCGTTTTCTGCCTTATTGCTTTCTGGGGCGTGTTTCC
TGTTCCGGTACTGCTTGAGATCATGTTTACCACATACCTTTTCAAGGGTGTCGTGGCGTTGCTGGACACGCCTTTCATGT
ATATTGCCCGCAAAGTGCATGCGGGGAACCCCGACTCACGCTGGTAA

Upstream 100 bases:

>100_bases
GTAAGCCGCACTTGACCGTCTGCCGGGAATCCGGCATTTCTCCGGATCATATCAGACAGAGCTTTTGCGCTCTGTCTTTT
CATTTGCCGGAGGTCATGTT

Downstream 100 bases:

>100_bases
CGGCGCAGCCGGTTTTCCGCATAATAAAAGGCCGGTGTCCGCACCGGCCTTTTTGTTTGTTTTTAAAGCAGCAGAGTTGT
GGCCATACCCAGAAAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNELLWIGFAFLDLTLTLLLYRFFGRAGIYGVIVFNLLLCNIQVLKTVTLFGLTTTLGNILYAGVFLATDMLSEFYGRKE
AQRGVLLGFTVVVLATLYMQIALLFSPAEGDFAQPHLSAIFGLLPRLAIASICAYLISQMHDVWAFEFWKKKTQGRFLWL
RNNASTLVSQLLDSAVFCLIAFWGVFPVPVLLEIMFTTYLFKGVVALLDTPFMYIARKVHAGNPDSRW

Sequences:

>Translated_228_residues
MNELLWIGFAFLDLTLTLLLYRFFGRAGIYGVIVFNLLLCNIQVLKTVTLFGLTTTLGNILYAGVFLATDMLSEFYGRKE
AQRGVLLGFTVVVLATLYMQIALLFSPAEGDFAQPHLSAIFGLLPRLAIASICAYLISQMHDVWAFEFWKKKTQGRFLWL
RNNASTLVSQLLDSAVFCLIAFWGVFPVPVLLEIMFTTYLFKGVVALLDTPFMYIARKVHAGNPDSRW
>Mature_228_residues
MNELLWIGFAFLDLTLTLLLYRFFGRAGIYGVIVFNLLLCNIQVLKTVTLFGLTTTLGNILYAGVFLATDMLSEFYGRKE
AQRGVLLGFTVVVLATLYMQIALLFSPAEGDFAQPHLSAIFGLLPRLAIASICAYLISQMHDVWAFEFWKKKTQGRFLWL
RNNASTLVSQLLDSAVFCLIAFWGVFPVPVLLEIMFTTYLFKGVVALLDTPFMYIARKVHAGNPDSRW

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 25715; Mature: 25715

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELLWIGFAFLDLTLTLLLYRFFGRAGIYGVIVFNLLLCNIQVLKTVTLFGLTTTLGNI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYAGVFLATDMLSEFYGRKEAQRGVLLGFTVVVLATLYMQIALLFSPAEGDFAQPHLSAI
HHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
FGLLPRLAIASICAYLISQMHDVWAFEFWKKKTQGRFLWLRNNASTLVSQLLDSAVFCLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHH
AFWGVFPVPVLLEIMFTTYLFKGVVALLDTPFMYIARKVHAGNPDSRW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNELLWIGFAFLDLTLTLLLYRFFGRAGIYGVIVFNLLLCNIQVLKTVTLFGLTTTLGNI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYAGVFLATDMLSEFYGRKEAQRGVLLGFTVVVLATLYMQIALLFSPAEGDFAQPHLSAI
HHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
FGLLPRLAIASICAYLISQMHDVWAFEFWKKKTQGRFLWLRNNASTLVSQLLDSAVFCLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHH
AFWGVFPVPVLLEIMFTTYLFKGVVALLDTPFMYIARKVHAGNPDSRW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]