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The map label for this gene is yajC [H]

Identifier: 78356860

GI number: 78356860

Start: 1867721

End: 1868080

Strand: Direct

Name: yajC [H]

Synonym: Dde_1817

Alternate gene names: 78356860

Gene position: 1867721-1868080 (Clockwise)

Preceding gene: 78356859

Following gene: 78356861

Centisome position: 50.07

GC content: 53.33

Gene sequence:

>360_bases
ATGTTCTCGACTAGTGTGGCCTATGCCATGGGTGCCGGCGCGGAAGCCGGAGCACAGGGTGGCAACCCGATCATGAGCTT
TGTGCCCCTGATTCTGATGTTCGCGATTTTCTACTTCATGCTCATCCGGCCTCAGCAGAAAAAGGCAAAAGAGCATCGCG
AAATGCTTGGTAACCTGAAAAAAGGTGACCGTGTGATCACCGGCGGCGGCCTGTATGGATGTATCGTCGAAGTGAGTGAT
GAATGGCTGTCCGTTGACCTCGGGCAGACTGTCGTCAAAGTCGGCCGCGGTTTCATTTCCGGTCTTGCCGATCCCAAAAA
CGGCAAAAAAGAAGAACCCGCCAAGGACAGCAAGAAATAA

Upstream 100 bases:

>100_bases
CAGAAAAGCGTTGAAAGTTTCTGTTCAAGCAGGTAGGTAGATTGCGTTTTCCCGCATCTGCGGGCTGCAACGCAAGAAAC
CTGACTGGCAAGGAGGATAT

Downstream 100 bases:

>100_bases
CGACGCTCCGGCGTCTTTTTATGCAAGCATACAGAAAAGACCGCCTCCCGCGGTCTTTTCTGCCTGAATGCTTGCTTTTT
TGTTGTAAAGAAGCCTGATG

Product: protein translocase subunit yajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MFSTSVAYAMGAGAEAGAQGGNPIMSFVPLILMFAIFYFMLIRPQQKKAKEHREMLGNLKKGDRVITGGGLYGCIVEVSD
EWLSVDLGQTVVKVGRGFISGLADPKNGKKEEPAKDSKK

Sequences:

>Translated_119_residues
MFSTSVAYAMGAGAEAGAQGGNPIMSFVPLILMFAIFYFMLIRPQQKKAKEHREMLGNLKKGDRVITGGGLYGCIVEVSD
EWLSVDLGQTVVKVGRGFISGLADPKNGKKEEPAKDSKK
>Mature_119_residues
MFSTSVAYAMGAGAEAGAQGGNPIMSFVPLILMFAIFYFMLIRPQQKKAKEHREMLGNLKKGDRVITGGGLYGCIVEVSD
EWLSVDLGQTVVKVGRGFISGLADPKNGKKEEPAKDSKK

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=104, Percent_Identity=36.5384615384615, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12826; Mature: 12826

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSTSVAYAMGAGAEAGAQGGNPIMSFVPLILMFAIFYFMLIRPQQKKAKEHREMLGNLK
CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
KGDRVITGGGLYGCIVEVSDEWLSVDLGQTVVKVGRGFISGLADPKNGKKEEPAKDSKK
CCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSTSVAYAMGAGAEAGAQGGNPIMSFVPLILMFAIFYFMLIRPQQKKAKEHREMLGNLK
CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
KGDRVITGGGLYGCIVEVSDEWLSVDLGQTVVKVGRGFISGLADPKNGKKEEPAKDSKK
CCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]