Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is ftnA [H]

Identifier: 78356834

GI number: 78356834

Start: 1842056

End: 1842616

Strand: Direct

Name: ftnA [H]

Synonym: Dde_1791

Alternate gene names: 78356834

Gene position: 1842056-1842616 (Clockwise)

Preceding gene: 78356832

Following gene: 78356835

Centisome position: 49.38

GC content: 51.16

Gene sequence:

>561_bases
ATGCCGATTACTTTTATGAACATCAAAGCCGGTATAACATCGGGAGAAAACATGCTTAGTCAGACAATGGAAAAAGCCTT
TAATGATCAGGTCAAGTGGGAGCTGTATTCAAGCTATCTGTACCTGTCCATGTCGTCATACTGCAACAACCTCGGACTGG
CGGGTTTTGCAAACTGGATGCGGATGCAGGCTCAGGAAGAGTTATTCCATGCCATGAAGTTTTATGATTACATCATGGAA
CGGGGCGGAAGAGCCATCATGCAGCCCATTGACGCACCGCCCAGCGAGTGGGGCGGGCCTCTCGACGTATTTGAAAAGGT
GCTGGAGCATGAAAAGCATGTCACCGGCCTTATCCATACGCTTGCCGATCTTGCTCTGGACGAACGCGACCATGCCGGTT
CGATTTTCCTGCAGTGGTTTATTTCGGAGCAAGTGGAAGAAGAAGCCACAGTGGCAGATCTGGTACATAAGCTGCGGCTT
ATAGGCGGTGAAGGTCAGGGCCTGCTGATGCTTGATAAAGAGCTTTCGGCCCGAGTCTTCACCCCGCCTGCGCAGGCTTA
G

Upstream 100 bases:

>100_bases
CAACGCTCTCATAGCGTAAGGAACCATCGCTGGCAACTATGAAATCAAGGATAGTCCTTGCAGATTTCCTTCTGTCATGT
ATGATGGAAGATAGTGCAAC

Downstream 100 bases:

>100_bases
CGGCGTTGCCCGGGCGTCTGGAAAAACGCCCCTGTCCACCAACACAAGGAGCTTCACGTGGAAACGAAAGACAAGCATAT
CGTCATAGGCGGCGAGGCCG

Product: ferritin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWMRMQAQEELFHAMKFYDYIME
RGGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHTLADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRL
IGGEGQGLLMLDKELSARVFTPPAQA

Sequences:

>Translated_186_residues
MPITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWMRMQAQEELFHAMKFYDYIME
RGGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHTLADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRL
IGGEGQGLLMLDKELSARVFTPPAQA
>Mature_185_residues
PITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWMRMQAQEELFHAMKFYDYIMER
GGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHTLADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRLI
GGEGQGLLMLDKELSARVFTPPAQA

Specific function: May alleviate iron toxicity in the presence of oxygen [H]

COG id: COG1528

COG function: function code P; Ferritin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Homo sapiens, GI56682959, Length=152, Percent_Identity=36.1842105263158, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI29126241, Length=167, Percent_Identity=33.5329341317365, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1788216, Length=160, Percent_Identity=36.875, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI1788212, Length=139, Percent_Identity=28.7769784172662, Blast_Score=69, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17506345, Length=156, Percent_Identity=34.6153846153846, Blast_Score=76, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17558956, Length=156, Percent_Identity=32.6923076923077, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR001519 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: =1.16.3.1 [H]

Molecular weight: Translated: 21049; Mature: 20918

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWM
CCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RMQAQEELFHAMKFYDYIMERGGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHT
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRLIGGEGQGLLMLDKELSARVF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEC
TPPAQA
CCCCCC
>Mature Secondary Structure 
PITFMNIKAGITSGENMLSQTMEKAFNDQVKWELYSSYLYLSMSSYCNNLGLAGFANWM
CEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RMQAQEELFHAMKFYDYIMERGGRAIMQPIDAPPSEWGGPLDVFEKVLEHEKHVTGLIHT
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LADLALDERDHAGSIFLQWFISEQVEEEATVADLVHKLRLIGGEGQGLLMLDKELSARVF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEC
TPPAQA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA