| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356707
Identifier: 78356707
GI number: 78356707
Start: 1717749
End: 1718444
Strand: Direct
Name: 78356707
Synonym: Dde_1664
Alternate gene names: NA
Gene position: 1717749-1718444 (Clockwise)
Preceding gene: 78356706
Following gene: 78356710
Centisome position: 46.05
GC content: 59.05
Gene sequence:
>696_bases ATGACCAGAACTGCTTTCTGCTGCTCGCATCCTGTTTCTTCCGCCATGCCGCACTGGCCGGAAGATCCGCCCACTGTGTT CACTCCGTGGTCGGACATGAACACGGACGGTTTTTTTCTGCGCAGTTTCTGTATGGGCGAGCACAGCGGCACCCATGTGA ACGCGCCAGCGGCTTTCTTTCAGGGGGGGCACGGTATTGACAGTGTTGCCTCCGCCCCGCTGGTTTTTCCGCTGGCTGTT ATTGATGTGCATCAGCAGGCTGCGCAGGATGTGTGTTATCTGTTACAGCCGGAGGATGTTCTGGACTGGGAACAACGGCA CGGGCCGTTGCAGGCGGGGACTTTTGTGGCCGTGCACACAGGCTGGGATGCTTTCTGGCATAGTCCTGACAGGTTTCTGG GACGGTGTGCGGGCGGAGGAATGCGTTTTCCTGCCGTGTCCCGTGCGGCAGCCAGGCTGCTTGTACAGCAGCGCGGTATA GCGGGTCTGGGCATTGATACACATGGCATAGATGCTCCCGACGACGCAAACTACACCTGCAACCGGATGATTCTTTCTGC CGGAGGTATTGTTGCGGAATGCCTGTGTTCTCTCGGGGCACTGCCTGCCACCGGCGCGACTGTCGTTCTGGGGGTTATTG CCTTACAGGGCGGGACTGGTGCTCCTGCCGCGGTCACAGTTCTTGTGGATGCCTGA
Upstream 100 bases:
>100_bases AGCAGGGGCTTATGACCGCCGAAGAGTATAACGAGCTGCTGGATCCGAGCAAGATGCTTGCTCCGAGAAAGTTGCCGAAC CGTAAAGCGGCAGAGGATAA
Downstream 100 bases:
>100_bases CAGGAGAGGGATTGGAAGTCTTCCGCGTTGCGGCGGGGTACTTTTCAGAACACTGCTCTGTGTCTTTGCCGTCAGAGTGC GGAGACATAAGCCGGAAAAA
Product: cyclase
Products: NA
Alternate protein names: Cyclase; Metal-Dependent Hydrolase; Cyclase Family; Cyclase Superfamily; Kynurenine Formamidase; Metal-Dependent Hydrolase/Cyclase; Twin-Arginine Translocation Pathway Signal; Arylformamidase; Cyclase Superfamily Protein; Secreted Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTRTAFCCSHPVSSAMPHWPEDPPTVFTPWSDMNTDGFFLRSFCMGEHSGTHVNAPAAFFQGGHGIDSVASAPLVFPLAV IDVHQQAAQDVCYLLQPEDVLDWEQRHGPLQAGTFVAVHTGWDAFWHSPDRFLGRCAGGGMRFPAVSRAAARLLVQQRGI AGLGIDTHGIDAPDDANYTCNRMILSAGGIVAECLCSLGALPATGATVVLGVIALQGGTGAPAAVTVLVDA
Sequences:
>Translated_231_residues MTRTAFCCSHPVSSAMPHWPEDPPTVFTPWSDMNTDGFFLRSFCMGEHSGTHVNAPAAFFQGGHGIDSVASAPLVFPLAV IDVHQQAAQDVCYLLQPEDVLDWEQRHGPLQAGTFVAVHTGWDAFWHSPDRFLGRCAGGGMRFPAVSRAAARLLVQQRGI AGLGIDTHGIDAPDDANYTCNRMILSAGGIVAECLCSLGALPATGATVVLGVIALQGGTGAPAAVTVLVDA >Mature_230_residues TRTAFCCSHPVSSAMPHWPEDPPTVFTPWSDMNTDGFFLRSFCMGEHSGTHVNAPAAFFQGGHGIDSVASAPLVFPLAVI DVHQQAAQDVCYLLQPEDVLDWEQRHGPLQAGTFVAVHTGWDAFWHSPDRFLGRCAGGGMRFPAVSRAAARLLVQQRGIA GLGIDTHGIDAPDDANYTCNRMILSAGGIVAECLCSLGALPATGATVVLGVIALQGGTGAPAAVTVLVDA
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24266; Mature: 24135
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTAFCCSHPVSSAMPHWPEDPPTVFTPWSDMNTDGFFLRSFCMGEHSGTHVNAPAAFF CCCCCCHHCCCHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEECCCHHHH QGGHGIDSVASAPLVFPLAVIDVHQQAAQDVCYLLQPEDVLDWEQRHGPLQAGTFVAVHT CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHCHHHHCCCCCCCCEEEEEC GWDAFWHSPDRFLGRCAGGGMRFPAVSRAAARLLVQQRGIAGLGIDTHGIDAPDDANYTC CCHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH NRMILSAGGIVAECLCSLGALPATGATVVLGVIALQGGTGAPAAVTVLVDA HHEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEC >Mature Secondary Structure TRTAFCCSHPVSSAMPHWPEDPPTVFTPWSDMNTDGFFLRSFCMGEHSGTHVNAPAAFF CCCCCHHCCCHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCEECCCHHHH QGGHGIDSVASAPLVFPLAVIDVHQQAAQDVCYLLQPEDVLDWEQRHGPLQAGTFVAVHT CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHCHHHHCCCCCCCCEEEEEC GWDAFWHSPDRFLGRCAGGGMRFPAVSRAAARLLVQQRGIAGLGIDTHGIDAPDDANYTC CCHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH NRMILSAGGIVAECLCSLGALPATGATVVLGVIALQGGTGAPAAVTVLVDA HHEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA