Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is yqfF [H]

Identifier: 78356695

GI number: 78356695

Start: 1703738

End: 1706080

Strand: Reverse

Name: yqfF [H]

Synonym: Dde_1652

Alternate gene names: 78356695

Gene position: 1706080-1703738 (Counterclockwise)

Preceding gene: 78356696

Following gene: 78356694

Centisome position: 45.74

GC content: 56.42

Gene sequence:

>2343_bases
ATGAGCATAGTGAAAAAGCCTAACGGCGGTCCGCAGGTAAGCGGCATACGCCCCCGCAAAAAAACCGTTCCGGCAGCCGG
AATAGCGTTTCTGTTCATCAGTCTGCTCTGCCTGTCCGTTGCGGCTTCGGTGCAGTTTGAAAACAGCCCCACTGTATATC
TGGCAGGCGAAGTTGCCGAACGCGACATTCAGGCCGATCAGGAACTGCGGGTTGAAGATGCAGCCGCCACTGAAGCACGG
CGCAACGAAGTTGCACGCACGCAGCCGCCGCTTTTTGACCTGAGCACCGCCACCATAGATGTGCTGCGCGCCAATGTGAA
CGCCACTCTGGAGTCTTTGCGCAACCTGTCCGCAGACAGACACGAAACCCACCGTCAGCAGCTGGCGGAAATGCTGAACA
GCGATATTTCGACGCGCACCTTTGATATCTGGCGCACCCCCGTGTTCGCCACCCTGCTGCAGCGTGAAGTGCTGCCGTGG
CTCGAAACACGCCTTGCCTCAGGCGTTGTGGCCGACCAGCGCATCCTGCTGCAGGAACGTAACGGCATCATCGTCCGCGA
TCTTTCCTCCGGTTCCGAGGTGTTGCGCGAAGACCTGCGCTATGTGCCCGACATAGAAAAGCTGGAAAAAGATATGGAAA
GCTTTCTGCGGCACGACCTTAATATTCCCCTGCGCATGCGCCGCGCCGTGACAGACATGCTCTTTCCTCTGCTGGCGCCC
ACTCTGACTCTGAACAGAGAAGCCACAACCCGCAGAACACAGGAAGTGCGCAATGCGGTTTCGCCGGTGTATTACCGTCT
GCAGAAAGGTGAAATCATTGTCAGACAGGGTGAAAAAGTAACCGAAGACATGCAGCTTAAACTGCAGGCTCTTGTGTCGC
AGAAACAGGAACATCTGTCCGCACCGCGTGTTGCGGGCGTTTTTCTGACGGCACTCATTCTGGCCGCCGGGCTGCTTTTT
TCACACCGTACAGGCAGTTTTTCATTCAAAAGCAGCAAAGACATCATTTTCCTTTCCTGCGTGGTACTTGCTTTTGCCGG
CATGGCCAAAGGGCTGGATGTGCTGGGGGCGGCGCTGGCCGAAGGCAAAGGGGGCGACTCATTCGAGCTTCTGCCGTTTC
TGCTGCCTGTGGCAAGCGCGGGCGGACTGATCGGGCTCATATTTTCATTCAGGCGCTGCGTCACCACATCGCTGCTGCTG
GCCTTCATCTGCATGGCAATGATGGACGGCGGCACAGATGTCATGCTCTTTTTCTTTCTGTCATCCGTCTGGGGTGCATG
GGTCATCCGGCGGGCTCAGACCAGACAGGAGGTTGTCTGGAGCCTTTTGCCGCTAGCAGGGGGCATACTTGCCCTGTGGT
GCGGAATGGCCTTTCTGGAAGGCTCGGGCTGGGCACGTTTCGGTTACGGACTGATGCTTGCTTCGGCCAACGCCGTTCTT
TCACTGCTGCTCATTTTTGCTCTCAGCCCCATTGTCGAGCTGGCCTTCCGCTATACCACGCGTTTCCGCCTGATGGAACT
GATGAATCTGGAGCAGCCGCTGCTGCAGGAGCTTATGGTCACAGTGCCCGGAACGTATCACCACTCACTCATCGTGGCGA
ACATGGTTGAAGCCGGGGCAAAGGCAATCGGCGCCAACAGTCTGCTGTGCAAAGTGGCCGCGCTGTATCATGACATCGGC
AAACTGGCCAAACCGGAATATTTCATCGAGAATCAGGCCGGCGGCAAGAACAAGCATAACAAGCTGGCTCCTTCCATGAG
CGCACTCATTCTGCTGTCTCATGTCAAAAAAGGAGTGGAAATGGCCCGCCAGCACCGGCTGGGTAACCGGATAACGGACA
TTATTCAGCAGCATCACGGCACATCGCTGATCCGCTTTTTCTACCAGAAAGCCATCGATAACGGCGAAAACCCCAGAACC
GAGGATTACAGCTATCCCGGCCCCAAACCACAAAGCCGTGAAGCCGCCATCGTCATGCTGGCCGATGCCGTGGAAGCGTC
CAGCCGCACGCTGAACGAACCGACGCCAAGCCGCATCCGAGGGCACATTGAAACAATCATGAAAAACATCTTTGCCGAAG
GGCAGCTGGATGAATCCGAACTGACTTTCAGGCAGCTGTCTATGCTGACAGACAGCTTTCACCGCATTCTGGCCGGCATA
TTCCACCAGCGCATAGAGTACCCCGACGCGAAACAGGGACAACGCGCAGCCTCTCAGGAAGATAAAAGCGAAAAGAAAAA
ACAGGCCGTGTCGCAACAGCCTGAAAAAAGAACCACGCTCATCGCTGTTTCCGACAGACCTGCCCGTCCCCAGACATCTG
CGCGCAGCGGAGAACAGCCATGA

Upstream 100 bases:

>100_bases
GGCAACGTCAAGGGAATACGTTTTCTGCATTTTCATGAAGACGATGTCATCCGGCACCCTCTTGTGGGCAGGATAGTTCA
GGCATACGACCGGTTTGAAA

Downstream 100 bases:

>100_bases
TTGTCATAACAACACGCACCGGTGCCATGACCGGTTTTCCTCTTTCCCGTCACGACATCAGAATAGCACTGCATAGCATG
CTTAGCTGTCTTGGACTTTC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 780; Mature: 779

Protein sequence:

>780_residues
MSIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAERDIQADQELRVEDAAATEAR
RNEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADRHETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPW
LETRLASGVVADQRILLQERNGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAP
TLTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLSAPRVAGVFLTALILAAGLLF
SHRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALAEGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLL
AFICMAMMDGGTDVMLFFFLSSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVL
SLLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGAKAIGANSLLCKVAALYHDIG
KLAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVEMARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRT
EDYSYPGPKPQSREAAIVMLADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGI
FHQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP

Sequences:

>Translated_780_residues
MSIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAERDIQADQELRVEDAAATEAR
RNEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADRHETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPW
LETRLASGVVADQRILLQERNGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAP
TLTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLSAPRVAGVFLTALILAAGLLF
SHRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALAEGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLL
AFICMAMMDGGTDVMLFFFLSSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVL
SLLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGAKAIGANSLLCKVAALYHDIG
KLAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVEMARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRT
EDYSYPGPKPQSREAAIVMLADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGI
FHQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP
>Mature_779_residues
SIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAERDIQADQELRVEDAAATEARR
NEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADRHETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPWL
ETRLASGVVADQRILLQERNGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAPT
LTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLSAPRVAGVFLTALILAAGLLFS
HRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALAEGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLLA
FICMAMMDGGTDVMLFFFLSSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVLS
LLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGAKAIGANSLLCKVAALYHDIGK
LAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVEMARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRTE
DYSYPGPKPQSREAAIVMLADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGIF
HQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 86527; Mature: 86396

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAE
CCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECHHHH
RDIQADQELRVEDAAATEARRNEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADR
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
HETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPWLETRLASGVVADQRILLQER
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
NGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAP
CCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TLTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC
APRVAGVFLTALILAAGLLFSHRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLLAFICMAMMDGGTDVMLFFFL
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SLLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KAIGANSLLCKVAALYHDIGKLAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVE
HHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRTEDYSYPGPKPQSREAAIVML
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
ADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGI
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FHQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIVKKPNGGPQVSGIRPRKKTVPAAGIAFLFISLLCLSVAASVQFENSPTVYLAGEVAE
CCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECHHHH
RDIQADQELRVEDAAATEARRNEVARTQPPLFDLSTATIDVLRANVNATLESLRNLSADR
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
HETHRQQLAEMLNSDISTRTFDIWRTPVFATLLQREVLPWLETRLASGVVADQRILLQER
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
NGIIVRDLSSGSEVLREDLRYVPDIEKLEKDMESFLRHDLNIPLRMRRAVTDMLFPLLAP
CCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TLTLNREATTRRTQEVRNAVSPVYYRLQKGEIIVRQGEKVTEDMQLKLQALVSQKQEHLS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC
APRVAGVFLTALILAAGLLFSHRTGSFSFKSSKDIIFLSCVVLAFAGMAKGLDVLGAALA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKGGDSFELLPFLLPVASAGGLIGLIFSFRRCVTTSLLLAFICMAMMDGGTDVMLFFFL
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSVWGAWVIRRAQTRQEVVWSLLPLAGGILALWCGMAFLEGSGWARFGYGLMLASANAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SLLLIFALSPIVELAFRYTTRFRLMELMNLEQPLLQELMVTVPGTYHHSLIVANMVEAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KAIGANSLLCKVAALYHDIGKLAKPEYFIENQAGGKNKHNKLAPSMSALILLSHVKKGVE
HHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MARQHRLGNRITDIIQQHHGTSLIRFFYQKAIDNGENPRTEDYSYPGPKPQSREAAIVML
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
ADAVEASSRTLNEPTPSRIRGHIETIMKNIFAEGQLDESELTFRQLSMLTDSFHRILAGI
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FHQRIEYPDAKQGQRAASQEDKSEKKKQAVSQQPEKRTTLIAVSDRPARPQTSARSGEQP
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]