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The map label for this gene is dcrA [H]

Identifier: 78356693

GI number: 78356693

Start: 1700541

End: 1702979

Strand: Direct

Name: dcrA [H]

Synonym: Dde_1650

Alternate gene names: 78356693

Gene position: 1700541-1702979 (Clockwise)

Preceding gene: 78356689

Following gene: 78356697

Centisome position: 45.59

GC content: 57.56

Gene sequence:

>2439_bases
ATGTCCTTGCGTTTCAAAATGGCTGGCTTTTGCTTGCTTATCGGTCTTTTTCCTTTGCTTTTCATGGGTGTTTTCAGTGT
GAACACTGCGTCTGAAAGTCTGCGCGGCAAAGCACGCAGTCAGCTGGAGTCTGTGCGTGAAATACAGGGCAAAGCTGTTT
CAGGCGTTATTGCCACATGGCGGCAGGAAACAGTCATGTATTCCAAAGTCAAGGAAGTCTACAACGCCATAGGCATGCTG
CGCGACTATACCATCGGTCTGGCCGAAGAAGGCCTGCCCATGCCGGTGGATACACCTGAATATGAAGATCTCTACACGTA
TGTTAAGGCGGCCTTCACCCCGTATGTTGAAGTGCTGGGATATGAAGATGCCCTGCTTATAGACGATCACGGCAGGGTTC
TTTTTTCTGTGCAGCGCGGTGATGATCTGGGTGCCGACCTCAGATCGGGACAGTTTTCCGCTACCAATCTGGCTCAGGCC
TGGCGTAAAGCCGTGGCCGGCGAGACAGCTTTTGCCGATGTGGCTCCCTATGCTCCGTCCGGAGGGCGTCCTGCGGCTTT
TTTTGCGGCTCCGGTATACAGCTACACCGGAGATATTCTGGGGGTAGCCGCTTTGCGGCTGCCGCTGGGAAACATCACCG
GCCTGATGGAACAACAGTACGGCACAGGCTGTACAGGGGACAGCTATCTTGTGGGGCCGGATCTTCATATGCGTTCGGAT
TCACGTCAGGATCCGGAAAAACATGCCCTGCAGACATCTTTTGGCGCCGGCAGGGAGGGGCAGGTGGATAACAGGGCCGT
TCAGGACGCCCTGCAGGGCATAAGCGGCATCACTTCGGGTGACGGTCTGTCCGGAGGCCGGTCGGTGATGGCCTATCAGC
CGGTGCAGGCAGCCGGGGTCACATGGGCACTGATTACTTCTGTTTCAGAAAAAGAAGCCTTTGCCGCGGTGAGCGAGCTG
CGGTTTATAGCCGGTATGGCTGGTGCCGTTACCACTGTGGTGGTCATACTGCTGACATTTGTTTTTCTGCGCCGTGAACT
GCTGGCTCCGCTGGGGGCCATGCGTTCGTATGTGCAGAATGTCGCCGGAGGCGCTTTGCAGGCCCGCATGGAGACGGAAG
GTGTCCGTTTCAGGGCGGAAATAGGCCAGTTGTCGCAGGGGATTCTGCAGATGGTGAGCCAGCTCAAGGAAAAGCTGGGG
TTTGCCTCGGGCGTGCTGAGCGGTATCGTGGTGCCGTGTGTGGTGGTGGATACCCGCAACGTGATTTCATTTGTCAATCC
GCAACTGCTGGCGCTGCTGGAGCTGGAAGGCGAAGGCTGCGTCTATTGCGGTAAACCCGCCTCGCTGGTGCTGCAGCACG
GCAAGGACGGCCGGGGGACAACCTCGTGGTGCATCGAATCAGGCGAGACGGTGACCAATGTGGAGCGTGAATGGCGTACG
GAAAAAGGCAACATGCGCCATGTGCGTATTGATGCCGCGCCGCTGCATGATCTGGATGGCAGAGTCATCGGTGCCATCGC
ACTGGTTGCTGATCTTACAGACATAAAAAGCAAAGAATACCATATCAGTCTGCAGAATGAGACGATGCACGAAGTTGCAG
GTCGTGCGGACAGTATTGCTGCCGGGATTTCCGGCGAAGTGGCTGAGCTGTCGCACCGGGTCAAAAATGTATCTTCCGGA
GCACGGACTCAGGTCATGAGGCTTGAAGAAGCGGCGGAGTCTGTCGGCCGCATGAACAACGCCCTGCAGGAATCTGCAGG
ATATGCCCGTGAGGCCGTGGCAGGTGCCGAAACCGCGGTGGCCCGTGCCGAAGAAGGTGCGCGCATTGTGACTTCTTCCG
AAGAAGCCATGCACAGAGTCAGCAGCATGTCTTCCACTCTGCGCGAAAGCATGCATGAACTGGGGCAGCAGGCACAGGCC
ATCGGAGGAGTTCTGGATGTCATACGTGACATAGCAGACCAGACTAATCTGCTGGCACTCAACGCCGCCATAGAGGCCGC
CCGCGCAGGTGATGCCGGCCGGGGATTTGCCGTGGTGGCTGATGAGGTGCGCAAACTCGCAGAACGGACCATGAGTGCCA
CCAATGATGTGCGCCGCAGTGTGCAGACTATCCAGAAGGCTGCGGATGAAAACATGGCGCATACCGAAGCAGCCGCCGGT
GCCGTGGAGGAAACTGAACAGCTGGTGGCCGAGTCGGGCGAGGCCTTGCGCGTCATTGCCCGGCTGGCTGTGAACATGGG
CGGACAGATTGAGCAGATAGCCCGCTTTGCCGAAGAACACACCAGAGCAAACGAAGGCATCATACAGACTGTGGATGAGA
TAAGCCGCATAGCCAGACAAACCGAGGAAGGCATGGACGAGTCTGCCCGGTCTGTGGAAGGGCTGCGGGGCAATGCCTCG
GCGCTTCAGGGCATCATCGAGGAATTGCGCCGTTCGTGA

Upstream 100 bases:

>100_bases
GCCGTCCGCTTGATTGTCATATCGTTTTCACACTGCCGTAACAATCCGGAGTCATACAGGCCTGTGTTTTTTCATGATAT
CGGACAACGGGGTGGGAATG

Downstream 100 bases:

>100_bases
CACAGCGTATGGCGGTGCCGCCGTTTACAGTTGCCCGTACACCCTGAAAGCCCCGGCGCCGCCACGGACTGTGCATGCCG
CACCGTGTTGCACTGCATCA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 811

Protein sequence:

>812_residues
MSLRFKMAGFCLLIGLFPLLFMGVFSVNTASESLRGKARSQLESVREIQGKAVSGVIATWRQETVMYSKVKEVYNAIGML
RDYTIGLAEEGLPMPVDTPEYEDLYTYVKAAFTPYVEVLGYEDALLIDDHGRVLFSVQRGDDLGADLRSGQFSATNLAQA
WRKAVAGETAFADVAPYAPSGGRPAAFFAAPVYSYTGDILGVAALRLPLGNITGLMEQQYGTGCTGDSYLVGPDLHMRSD
SRQDPEKHALQTSFGAGREGQVDNRAVQDALQGISGITSGDGLSGGRSVMAYQPVQAAGVTWALITSVSEKEAFAAVSEL
RFIAGMAGAVTTVVVILLTFVFLRRELLAPLGAMRSYVQNVAGGALQARMETEGVRFRAEIGQLSQGILQMVSQLKEKLG
FASGVLSGIVVPCVVVDTRNVISFVNPQLLALLELEGEGCVYCGKPASLVLQHGKDGRGTTSWCIESGETVTNVEREWRT
EKGNMRHVRIDAAPLHDLDGRVIGAIALVADLTDIKSKEYHISLQNETMHEVAGRADSIAAGISGEVAELSHRVKNVSSG
ARTQVMRLEEAAESVGRMNNALQESAGYAREAVAGAETAVARAEEGARIVTSSEEAMHRVSSMSSTLRESMHELGQQAQA
IGGVLDVIRDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAERTMSATNDVRRSVQTIQKAADENMAHTEAAAG
AVEETEQLVAESGEALRVIARLAVNMGGQIEQIARFAEEHTRANEGIIQTVDEISRIARQTEEGMDESARSVEGLRGNAS
ALQGIIEELRRS

Sequences:

>Translated_812_residues
MSLRFKMAGFCLLIGLFPLLFMGVFSVNTASESLRGKARSQLESVREIQGKAVSGVIATWRQETVMYSKVKEVYNAIGML
RDYTIGLAEEGLPMPVDTPEYEDLYTYVKAAFTPYVEVLGYEDALLIDDHGRVLFSVQRGDDLGADLRSGQFSATNLAQA
WRKAVAGETAFADVAPYAPSGGRPAAFFAAPVYSYTGDILGVAALRLPLGNITGLMEQQYGTGCTGDSYLVGPDLHMRSD
SRQDPEKHALQTSFGAGREGQVDNRAVQDALQGISGITSGDGLSGGRSVMAYQPVQAAGVTWALITSVSEKEAFAAVSEL
RFIAGMAGAVTTVVVILLTFVFLRRELLAPLGAMRSYVQNVAGGALQARMETEGVRFRAEIGQLSQGILQMVSQLKEKLG
FASGVLSGIVVPCVVVDTRNVISFVNPQLLALLELEGEGCVYCGKPASLVLQHGKDGRGTTSWCIESGETVTNVEREWRT
EKGNMRHVRIDAAPLHDLDGRVIGAIALVADLTDIKSKEYHISLQNETMHEVAGRADSIAAGISGEVAELSHRVKNVSSG
ARTQVMRLEEAAESVGRMNNALQESAGYAREAVAGAETAVARAEEGARIVTSSEEAMHRVSSMSSTLRESMHELGQQAQA
IGGVLDVIRDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAERTMSATNDVRRSVQTIQKAADENMAHTEAAAG
AVEETEQLVAESGEALRVIARLAVNMGGQIEQIARFAEEHTRANEGIIQTVDEISRIARQTEEGMDESARSVEGLRGNAS
ALQGIIEELRRS
>Mature_811_residues
SLRFKMAGFCLLIGLFPLLFMGVFSVNTASESLRGKARSQLESVREIQGKAVSGVIATWRQETVMYSKVKEVYNAIGMLR
DYTIGLAEEGLPMPVDTPEYEDLYTYVKAAFTPYVEVLGYEDALLIDDHGRVLFSVQRGDDLGADLRSGQFSATNLAQAW
RKAVAGETAFADVAPYAPSGGRPAAFFAAPVYSYTGDILGVAALRLPLGNITGLMEQQYGTGCTGDSYLVGPDLHMRSDS
RQDPEKHALQTSFGAGREGQVDNRAVQDALQGISGITSGDGLSGGRSVMAYQPVQAAGVTWALITSVSEKEAFAAVSELR
FIAGMAGAVTTVVVILLTFVFLRRELLAPLGAMRSYVQNVAGGALQARMETEGVRFRAEIGQLSQGILQMVSQLKEKLGF
ASGVLSGIVVPCVVVDTRNVISFVNPQLLALLELEGEGCVYCGKPASLVLQHGKDGRGTTSWCIESGETVTNVEREWRTE
KGNMRHVRIDAAPLHDLDGRVIGAIALVADLTDIKSKEYHISLQNETMHEVAGRADSIAAGISGEVAELSHRVKNVSSGA
RTQVMRLEEAAESVGRMNNALQESAGYAREAVAGAETAVARAEEGARIVTSSEEAMHRVSSMSSTLRESMHELGQQAQAI
GGVLDVIRDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAERTMSATNDVRRSVQTIQKAADENMAHTEAAAGA
VEETEQLVAESGEALRVIARLAVNMGGQIEQIARFAEEHTRANEGIIQTVDEISRIARQTEEGMDESARSVEGLRGNASA
LQGIIEELRRS

Specific function: Signal Transducer For Aerotaxis. The Aerotactic Response Is The Accumulation Of Cells Around Air Bubbles. The Nature Of The Sensory Stimulus Detected By This Protein Is The Proton Motive Force Or Cellular Redox State. It Uses A FAD Prosthetic Group As A R

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=265, Percent_Identity=29.811320754717, Blast_Score=107, Evalue=4e-24,
Organism=Escherichia coli, GI1788195, Length=285, Percent_Identity=29.8245614035088, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1788194, Length=256, Percent_Identity=30.46875, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI2367378, Length=254, Percent_Identity=31.1023622047244, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1787690, Length=267, Percent_Identity=28.0898876404494, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 86951; Mature: 86819

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50885 HAMP ; PS50113 PAC ; PS00194 THIOREDOXIN ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRFKMAGFCLLIGLFPLLFMGVFSVNTASESLRGKARSQLESVREIQGKAVSGVIATW
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RQETVMYSKVKEVYNAIGMLRDYTIGLAEEGLPMPVDTPEYEDLYTYVKAAFTPYVEVLG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
YEDALLIDDHGRVLFSVQRGDDLGADLRSGQFSATNLAQAWRKAVAGETAFADVAPYAPS
CCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCC
GGRPAAFFAAPVYSYTGDILGVAALRLPLGNITGLMEQQYGTGCTGDSYLVGPDLHMRSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC
SRQDPEKHALQTSFGAGREGQVDNRAVQDALQGISGITSGDGLSGGRSVMAYQPVQAAGV
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHCC
TWALITSVSEKEAFAAVSELRFIAGMAGAVTTVVVILLTFVFLRRELLAPLGAMRSYVQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGGALQARMETEGVRFRAEIGQLSQGILQMVSQLKEKLGFASGVLSGIVVPCVVVDTRN
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH
VISFVNPQLLALLELEGEGCVYCGKPASLVLQHGKDGRGTTSWCIESGETVTNVEREWRT
HHHHCCHHHEEEEEECCCCCEEECCCHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHC
EKGNMRHVRIDAAPLHDLDGRVIGAIALVADLTDIKSKEYHISLQNETMHEVAGRADSIA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCHHHHH
AGISGEVAELSHRVKNVSSGARTQVMRLEEAAESVGRMNNALQESAGYAREAVAGAETAV
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
ARAEEGARIVTSSEEAMHRVSSMSSTLRESMHELGQQAQAIGGVLDVIRDIADQTNLLAL
HHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEH
NAAIEAARAGDAGRGFAVVADEVRKLAERTMSATNDVRRSVQTIQKAADENMAHTEAAAG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AVEETEQLVAESGEALRVIARLAVNMGGQIEQIARFAEEHTRANEGIIQTVDEISRIARQ
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TEEGMDESARSVEGLRGNASALQGIIEELRRS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLRFKMAGFCLLIGLFPLLFMGVFSVNTASESLRGKARSQLESVREIQGKAVSGVIATW
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RQETVMYSKVKEVYNAIGMLRDYTIGLAEEGLPMPVDTPEYEDLYTYVKAAFTPYVEVLG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
YEDALLIDDHGRVLFSVQRGDDLGADLRSGQFSATNLAQAWRKAVAGETAFADVAPYAPS
CCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCC
GGRPAAFFAAPVYSYTGDILGVAALRLPLGNITGLMEQQYGTGCTGDSYLVGPDLHMRSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC
SRQDPEKHALQTSFGAGREGQVDNRAVQDALQGISGITSGDGLSGGRSVMAYQPVQAAGV
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHCC
TWALITSVSEKEAFAAVSELRFIAGMAGAVTTVVVILLTFVFLRRELLAPLGAMRSYVQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAGGALQARMETEGVRFRAEIGQLSQGILQMVSQLKEKLGFASGVLSGIVVPCVVVDTRN
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH
VISFVNPQLLALLELEGEGCVYCGKPASLVLQHGKDGRGTTSWCIESGETVTNVEREWRT
HHHHCCHHHEEEEEECCCCCEEECCCHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHC
EKGNMRHVRIDAAPLHDLDGRVIGAIALVADLTDIKSKEYHISLQNETMHEVAGRADSIA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCHHHHH
AGISGEVAELSHRVKNVSSGARTQVMRLEEAAESVGRMNNALQESAGYAREAVAGAETAV
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
ARAEEGARIVTSSEEAMHRVSSMSSTLRESMHELGQQAQAIGGVLDVIRDIADQTNLLAL
HHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEH
NAAIEAARAGDAGRGFAVVADEVRKLAERTMSATNDVRRSVQTIQKAADENMAHTEAAAG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AVEETEQLVAESGEALRVIARLAVNMGGQIEQIARFAEEHTRANEGIIQTVDEISRIARQ
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TEEGMDESARSVEGLRGNASALQGIIEELRRS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]