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The map label for this gene is pfpI [H]

Identifier: 78356689

GI number: 78356689

Start: 1696612

End: 1697136

Strand: Direct

Name: pfpI [H]

Synonym: Dde_1646

Alternate gene names: 78356689

Gene position: 1696612-1697136 (Clockwise)

Preceding gene: 78356688

Following gene: 78356693

Centisome position: 45.48

GC content: 57.14

Gene sequence:

>525_bases
ATGTCCGATCTGCACGGTAAGAAAATTCTGATGTTTGTTGAAGAGTACTACGAGGATCTGGAGCTGTGGTACCCGAAAAT
CAGGCTTCAGGAGGAAGGAGCCGAGGTGGTGGTGGCCGGTCCTGCGACCGGTAAGGTATACAAGGGCAAAAACGGGTACC
CGTGCGAGGCTGATGTTGCCATTGCGGACGTTGACGCCGGCGGGTACGACGGCCTTGTGCTTTGCGGCGGGTGGGCTCCG
GATAAACTGCGCCGTGATCCCAGAGTGCTGGAAATAACCAGAACCATCCATGATGCCGGTAAGCCTGTGGCGCATATCTG
CCACGCGGGGTGGGTGCCCATCTCGGCGGGAGTGATGAAAGGTATCCGGTGCACATCGGTAAACGCCATCCGTGACGATT
TGCAGAACGCCGGAGCTCAGTGGGTTGATCAGGAGGTGGTGGTGGACAAGAACCATATCACCAGCCGTACGCCCAAAGAC
CTGCCTGCGTTTTGCAAGGCCATTATCGCCATGCTGAAAGCCTGA

Upstream 100 bases:

>100_bases
ACAGTGCCTGACGTGTGATAAGACATGGGTCGGTGCGGTATTGCCGTAGCCGGATTCCAAGTATGACCAGACAGGGCTGC
TACGCCCGGGGAGAAAGAAT

Downstream 100 bases:

>100_bases
TTCTGTATACAGCTACAAGCAGATGCGACGTGCCACCGGAAGTTTATGCAGCTCCGGTGGCACTTTTTTTCGGCACGGGT
TGACGGGGAATGGCCGGCGG

Product: peptidase C56, PfpI

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSDLHGKKILMFVEEYYEDLELWYPKIRLQEEGAEVVVAGPATGKVYKGKNGYPCEADVAIADVDAGGYDGLVLCGGWAP
DKLRRDPRVLEITRTIHDAGKPVAHICHAGWVPISAGVMKGIRCTSVNAIRDDLQNAGAQWVDQEVVVDKNHITSRTPKD
LPAFCKAIIAMLKA

Sequences:

>Translated_174_residues
MSDLHGKKILMFVEEYYEDLELWYPKIRLQEEGAEVVVAGPATGKVYKGKNGYPCEADVAIADVDAGGYDGLVLCGGWAP
DKLRRDPRVLEITRTIHDAGKPVAHICHAGWVPISAGVMKGIRCTSVNAIRDDLQNAGAQWVDQEVVVDKNHITSRTPKD
LPAFCKAIIAMLKA
>Mature_173_residues
SDLHGKKILMFVEEYYEDLELWYPKIRLQEEGAEVVVAGPATGKVYKGKNGYPCEADVAIADVDAGGYDGLVLCGGWAPD
KLRRDPRVLEITRTIHDAGKPVAHICHAGWVPISAGVMKGIRCTSVNAIRDDLQNAGAQWVDQEVVVDKNHITSRTPKDL
PAFCKAIIAMLKA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=171, Percent_Identity=42.1052631578947, Blast_Score=130, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19043; Mature: 18912

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLHGKKILMFVEEYYEDLELWYPKIRLQEEGAEVVVAGPATGKVYKGKNGYPCEADVA
CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCEEECCCCCCCCCCEE
IADVDAGGYDGLVLCGGWAPDKLRRDPRVLEITRTIHDAGKPVAHICHAGWVPISAGVMK
EEEECCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHC
GIRCTSVNAIRDDLQNAGAQWVDQEVVVDKNHITSRTPKDLPAFCKAIIAMLKA
CCEECCHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLHGKKILMFVEEYYEDLELWYPKIRLQEEGAEVVVAGPATGKVYKGKNGYPCEADVA
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCEEECCCCCCCCCCEE
IADVDAGGYDGLVLCGGWAPDKLRRDPRVLEITRTIHDAGKPVAHICHAGWVPISAGVMK
EEEECCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHC
GIRCTSVNAIRDDLQNAGAQWVDQEVVVDKNHITSRTPKDLPAFCKAIIAMLKA
CCEECCHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA