| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356655
Identifier: 78356655
GI number: 78356655
Start: 1660320
End: 1661771
Strand: Direct
Name: 78356655
Synonym: Dde_1612
Alternate gene names: NA
Gene position: 1660320-1661771 (Clockwise)
Preceding gene: 78356654
Following gene: 78356656
Centisome position: 44.51
GC content: 57.44
Gene sequence:
>1452_bases GTGGGCTGTGAATGGTTACTGACGCAGCTGTGCCGGTTGCGGCTGTGCGCCGGTCAGGTCGGTTATGCGGCACAGATAGA CGGCTTGCAGGGGATTCTGCAGGCTTTTTTCTTTTACGGCGCTGTTGACCTGCACCGGGGTTGCACGGCAAACAGGATGC TGCCGCAGGGCATACGGGCATGTGACGGGAGAATCAGTGTGGAAATACGCTATGACAAGACTGCGCGCAGTGTGAAGCAA CTGCAGCAGACGCTGGCAGCCTATCTGGATGCGCTGCCGGCGCTGATGTGGCATGTGGATACCGTGCGTAACGAGATGAT ATTTTTTAATGATCATAAGGTTGCGGGGCTTAACGGCAAGATACCTCTCATGCTGCGCAATATGTCTCTGGCGCAGGCTC TGGTGCACCCTGACGACTTCAGTGTGTTTCGCGGAGCGCTTGATGCGGTGCGGGTTCTCCAGCCATGTTCAGTGTCCTTT CGTGTGCATGACGATGCAGGCAACTGGCACTGGCTGGTGCTGATGGGAATGCCCGCACCTGACGAGTCTTTCGGGTACGT GGGGCTGGCTGCGGAATGCACCTCTCTGGTGGAGTCCATGATGGAAAGAGGGGCGGACAGCCTGCTGGCGGGCAGTATGG AATTGCTCGACAGCCCGGCTCTTCTTGTTGATTTCACGACCAAAAATGTACAGGCCGCCAATGCTGCGGCATGTGTATGC TTCGGCTATGCCGCAGCTGCCGACTTTCCTTCGTTTGAAACGATGCTGGAGGGAACAGGAGAGCAGTACAGGCGCAGCAT ATACGAGCACCTTATTTTTCACGCATCATGGCGGGGGGCACTCACCTTGGCGGGCAACGGCGGCATGCGCATGTGTTGCC GGGCGCAGCTGCGTCCCGTCTCCCGTGAAGGCCATAATTATCTGTGGGTCAGTCTTACACCTGCGGTGCAGCCTGCAGAA GCAGCGCCCGTATCAAGCCCTGTTTCCGCCGCGCTGCGCGAAGCCCTCAGCCGCGCAGCCGATGATATGTCCGCCCTGAC CGCAGTGCTGGAACATCAGCCGCAGGGTATGCAGGCGGAAGGGGTTATGCTGTCCCGTATTTACGCAGCCGACGATAAAG TTGAAGTGACAGGGGCGGGAGTTCCTTTTGACGGCATGGAACCCGGTACGGCCTACCCTTACAGAGGGTCCATCGCAGAG AATATTGTCCGTTACAACCTGCCTTATCTTGTGGTCGATGAAACTGCACGCAGCATACGGCCCATTGACTGGGCTCTGTT CATTCCCGGCGGTATTCACTCTTATTATGCCGAACCGTTCTATGCAGGGGATACTCTGAAATATGTGCTGATTTACTGTT CTACCCGCAGCGAGGCTTTTTCCGCCGACGGCGCACCCGCCTGCAAGGAGGTGGTCAGGCTTCTTGCTCAGACTCTGAAG CGGCTGGACTGA
Upstream 100 bases:
>100_bases ATTTTTTGTTTTTAAACAGCGTGTTGCGTGGTTATGTCGCTCGTTTTTTCACTGCGGGGGCACGCGGGCGCCGGTTGCCA AAAAACAAGGGGCGCAGTAT
Downstream 100 bases:
>100_bases GCTTGCGGAGGCATATAGGCATTGCACAGCCTGTCATCAGACGGGGGCGGACTATATATGCTTTTATACGCGGTTGCCTT TGCAACGCGGCCGGCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MGCEWLLTQLCRLRLCAGQVGYAAQIDGLQGILQAFFFYGAVDLHRGCTANRMLPQGIRACDGRISVEIRYDKTARSVKQ LQQTLAAYLDALPALMWHVDTVRNEMIFFNDHKVAGLNGKIPLMLRNMSLAQALVHPDDFSVFRGALDAVRVLQPCSVSF RVHDDAGNWHWLVLMGMPAPDESFGYVGLAAECTSLVESMMERGADSLLAGSMELLDSPALLVDFTTKNVQAANAAACVC FGYAAAADFPSFETMLEGTGEQYRRSIYEHLIFHASWRGALTLAGNGGMRMCCRAQLRPVSREGHNYLWVSLTPAVQPAE AAPVSSPVSAALREALSRAADDMSALTAVLEHQPQGMQAEGVMLSRIYAADDKVEVTGAGVPFDGMEPGTAYPYRGSIAE NIVRYNLPYLVVDETARSIRPIDWALFIPGGIHSYYAEPFYAGDTLKYVLIYCSTRSEAFSADGAPACKEVVRLLAQTLK RLD
Sequences:
>Translated_483_residues MGCEWLLTQLCRLRLCAGQVGYAAQIDGLQGILQAFFFYGAVDLHRGCTANRMLPQGIRACDGRISVEIRYDKTARSVKQ LQQTLAAYLDALPALMWHVDTVRNEMIFFNDHKVAGLNGKIPLMLRNMSLAQALVHPDDFSVFRGALDAVRVLQPCSVSF RVHDDAGNWHWLVLMGMPAPDESFGYVGLAAECTSLVESMMERGADSLLAGSMELLDSPALLVDFTTKNVQAANAAACVC FGYAAAADFPSFETMLEGTGEQYRRSIYEHLIFHASWRGALTLAGNGGMRMCCRAQLRPVSREGHNYLWVSLTPAVQPAE AAPVSSPVSAALREALSRAADDMSALTAVLEHQPQGMQAEGVMLSRIYAADDKVEVTGAGVPFDGMEPGTAYPYRGSIAE NIVRYNLPYLVVDETARSIRPIDWALFIPGGIHSYYAEPFYAGDTLKYVLIYCSTRSEAFSADGAPACKEVVRLLAQTLK RLD >Mature_482_residues GCEWLLTQLCRLRLCAGQVGYAAQIDGLQGILQAFFFYGAVDLHRGCTANRMLPQGIRACDGRISVEIRYDKTARSVKQL QQTLAAYLDALPALMWHVDTVRNEMIFFNDHKVAGLNGKIPLMLRNMSLAQALVHPDDFSVFRGALDAVRVLQPCSVSFR VHDDAGNWHWLVLMGMPAPDESFGYVGLAAECTSLVESMMERGADSLLAGSMELLDSPALLVDFTTKNVQAANAAACVCF GYAAAADFPSFETMLEGTGEQYRRSIYEHLIFHASWRGALTLAGNGGMRMCCRAQLRPVSREGHNYLWVSLTPAVQPAEA APVSSPVSAALREALSRAADDMSALTAVLEHQPQGMQAEGVMLSRIYAADDKVEVTGAGVPFDGMEPGTAYPYRGSIAEN IVRYNLPYLVVDETARSIRPIDWALFIPGGIHSYYAEPFYAGDTLKYVLIYCSTRSEAFSADGAPACKEVVRLLAQTLKR LD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52834; Mature: 52703
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCEWLLTQLCRLRLCAGQVGYAAQIDGLQGILQAFFFYGAVDLHRGCTANRMLPQGIRA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH CDGRISVEIRYDKTARSVKQLQQTLAAYLDALPALMWHVDTVRNEMIFFNDHKVAGLNGK CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCC IPLMLRNMSLAQALVHPDDFSVFRGALDAVRVLQPCSVSFRVHDDAGNWHWLVLMGMPAP CCEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCC DESFGYVGLAAECTSLVESMMERGADSLLAGSMELLDSPALLVDFTTKNVQAANAAACVC CCCCCEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCEEEEEEECCCCCCCCHHHHHH FGYAAAADFPSFETMLEGTGEQYRRSIYEHLIFHASWRGALTLAGNGGMRMCCRAQLRPV HHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCC SREGHNYLWVSLTPAVQPAEAAPVSSPVSAALREALSRAADDMSALTAVLEHQPQGMQAE CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GVMLSRIYAADDKVEVTGAGVPFDGMEPGTAYPYRGSIAENIVRYNLPYLVVDETARSIR CEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHCC PIDWALFIPGGIHSYYAEPFYAGDTLKYVLIYCSTRSEAFSADGAPACKEVVRLLAQTLK CCEEEEECCCCHHHHHCCCEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH RLD HCC >Mature Secondary Structure GCEWLLTQLCRLRLCAGQVGYAAQIDGLQGILQAFFFYGAVDLHRGCTANRMLPQGIRA CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH CDGRISVEIRYDKTARSVKQLQQTLAAYLDALPALMWHVDTVRNEMIFFNDHKVAGLNGK CCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCC IPLMLRNMSLAQALVHPDDFSVFRGALDAVRVLQPCSVSFRVHDDAGNWHWLVLMGMPAP CCEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCC DESFGYVGLAAECTSLVESMMERGADSLLAGSMELLDSPALLVDFTTKNVQAANAAACVC CCCCCEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCEEEEEEECCCCCCCCHHHHHH FGYAAAADFPSFETMLEGTGEQYRRSIYEHLIFHASWRGALTLAGNGGMRMCCRAQLRPV HHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCC SREGHNYLWVSLTPAVQPAEAAPVSSPVSAALREALSRAADDMSALTAVLEHQPQGMQAE CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GVMLSRIYAADDKVEVTGAGVPFDGMEPGTAYPYRGSIAENIVRYNLPYLVVDETARSIR CEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHCC PIDWALFIPGGIHSYYAEPFYAGDTLKYVLIYCSTRSEAFSADGAPACKEVVRLLAQTLK CCEEEEECCCCHHHHHCCCEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH RLD HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA