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The map label for this gene is 78356605

Identifier: 78356605

GI number: 78356605

Start: 1579771

End: 1580802

Strand: Direct

Name: 78356605

Synonym: Dde_1562

Alternate gene names: NA

Gene position: 1579771-1580802 (Clockwise)

Preceding gene: 78356604

Following gene: 78356606

Centisome position: 42.35

GC content: 61.34

Gene sequence:

>1032_bases
ATGATTGAGGGAAAAGGCGCTCCGGCGCTGAAGAAAATTCTGTTGCTTGCCGCATTTCTGGGAGTGTGGCAGGCGTGTTG
TCTGCCGTCCGCCGCACAGAGTGCGGCGGCTGTTTTTGTGGTGGAACCGGCGCACAGAGTGGTCACCCTGACCGGTTTTA
CGCGGCCGCGTACCCGCCTTGCGCTGGTGAGCGAAGTTCCGGCGCGCTGCACGCAGGTGTACGCCGACGTGGGTGACCCC
ATAGGTGAAAAAGGTGTTTTTGCGACCTTGGACACCACATTTATCAGGCTGGAACTGCAGGCCAACAGGGCCGATCAGCA
GCGCCTGAAAAGTGATGTGGCGTATTTTGACAAGGAAACTTCAAGGTACCGGAATCTTGTGGGCGGCAAACACGCGGCGC
AGTCGCAGCTGGACGGTATTGTGCGTGATCTGGTGACCGCCAGACAGCAGCTGGAACGGTTGCGCATTGATGAAATGACA
CTGGCAGAACGTCTGCGGCGGCATACCATCAGTGCGCCTTCGGGCTGGCGCGTCATCGAACGCAGCGTGGAGCCGGGAGA
GTGGGTGACGCAGGGGCAGAAGCTGGCCGTAATCGGCGACTTTGATACCCTGCTTGTGCCGCTGGCGCTCAGCGTACGCG
AGTTTGAAGCCCTGAAGGCAATGGAGCGCATAGAACTGACTCTGCCCGACAGCGGTACGCGTATTTCTGCCGTTGTGGAG
CGAGTTTCGCCCGACTTTGACCCCGCCACACGCAAGATCAACGTCGACCTGCAGGTAACCGGCGAAACCGGCGTCCTGCG
CGGCGGCATCCGAACAGAGCTTGCCCTGCGTATGCCGGATGAAGGGGGCGCCGTGGCGGTGCCTCAGTCTGCTCTGACAA
GGGCGTACGAGGACTGGTTTCTGGTGCGCCCCGACGGAGAGCGTGTCCGCGTGCTGGTACTGGGCCCCGGTGAACAGGCA
GGTACCATGCGTGTGCGTTCCGCGCAGGTGCATGCCGGTGATGTCTTTCTTGTCACCCCCGAGGCAGGGTAG

Upstream 100 bases:

>100_bases
GCAGGGCTCCGCTGATGATGGGGGCGCTGGATACACATGCGATGATTGACAGGGTACCGGATTTTATTGCCGGTCTGGCA
CGGGCTGCCAGAGGAGGAAT

Downstream 100 bases:

>100_bases
CGGAGCCGTATATGAAATCTGTAGTACGCTTTACCCTGCGCCAGACGGTGCTGCTTAACCTGCTGTTTGTATTGCTGATG
GTGGTGGGCGTGTTTGCCAC

Product: secretion protein HlyD

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIEGKGAPALKKILLLAAFLGVWQACCLPSAAQSAAAVFVVEPAHRVVTLTGFTRPRTRLALVSEVPARCTQVYADVGDP
IGEKGVFATLDTTFIRLELQANRADQQRLKSDVAYFDKETSRYRNLVGGKHAAQSQLDGIVRDLVTARQQLERLRIDEMT
LAERLRRHTISAPSGWRVIERSVEPGEWVTQGQKLAVIGDFDTLLVPLALSVREFEALKAMERIELTLPDSGTRISAVVE
RVSPDFDPATRKINVDLQVTGETGVLRGGIRTELALRMPDEGGAVAVPQSALTRAYEDWFLVRPDGERVRVLVLGPGEQA
GTMRVRSAQVHAGDVFLVTPEAG

Sequences:

>Translated_343_residues
MIEGKGAPALKKILLLAAFLGVWQACCLPSAAQSAAAVFVVEPAHRVVTLTGFTRPRTRLALVSEVPARCTQVYADVGDP
IGEKGVFATLDTTFIRLELQANRADQQRLKSDVAYFDKETSRYRNLVGGKHAAQSQLDGIVRDLVTARQQLERLRIDEMT
LAERLRRHTISAPSGWRVIERSVEPGEWVTQGQKLAVIGDFDTLLVPLALSVREFEALKAMERIELTLPDSGTRISAVVE
RVSPDFDPATRKINVDLQVTGETGVLRGGIRTELALRMPDEGGAVAVPQSALTRAYEDWFLVRPDGERVRVLVLGPGEQA
GTMRVRSAQVHAGDVFLVTPEAG
>Mature_343_residues
MIEGKGAPALKKILLLAAFLGVWQACCLPSAAQSAAAVFVVEPAHRVVTLTGFTRPRTRLALVSEVPARCTQVYADVGDP
IGEKGVFATLDTTFIRLELQANRADQQRLKSDVAYFDKETSRYRNLVGGKHAAQSQLDGIVRDLVTARQQLERLRIDEMT
LAERLRRHTISAPSGWRVIERSVEPGEWVTQGQKLAVIGDFDTLLVPLALSVREFEALKAMERIELTLPDSGTRISAVVE
RVSPDFDPATRKINVDLQVTGETGVLRGGIRTELALRMPDEGGAVAVPQSALTRAYEDWFLVRPDGERVRVLVLGPGEQA
GTMRVRSAQVHAGDVFLVTPEAG

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37513; Mature: 37513

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEGKGAPALKKILLLAAFLGVWQACCLPSAAQSAAAVFVVEPAHRVVTLTGFTRPRTRL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCEEEEEECCCCCCHHH
ALVSEVPARCTQVYADVGDPIGEKGVFATLDTTFIRLELQANRADQQRLKSDVAYFDKET
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEEEECCCHHHHHHHHHHHHHHHHH
SRYRNLVGGKHAAQSQLDGIVRDLVTARQQLERLRIDEMTLAERLRRHTISAPSGWRVIE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHC
RSVEPGEWVTQGQKLAVIGDFDTLLVPLALSVREFEALKAMERIELTLPDSGTRISAVVE
CCCCCCHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH
RVSPDFDPATRKINVDLQVTGETGVLRGGIRTELALRMPDEGGAVAVPQSALTRAYEDWF
HHCCCCCCCCEEEEEEEEECCCCCEEECCCCEEEEEECCCCCCEEECCHHHHHHHHHCEE
LVRPDGERVRVLVLGPGEQAGTMRVRSAQVHAGDVFLVTPEAG
EECCCCCEEEEEEECCCCCCCCEEEEEEEEEECEEEEEECCCC
>Mature Secondary Structure
MIEGKGAPALKKILLLAAFLGVWQACCLPSAAQSAAAVFVVEPAHRVVTLTGFTRPRTRL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCCCEEEEEECCCCCCHHH
ALVSEVPARCTQVYADVGDPIGEKGVFATLDTTFIRLELQANRADQQRLKSDVAYFDKET
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEEEEEEECCCHHHHHHHHHHHHHHHHH
SRYRNLVGGKHAAQSQLDGIVRDLVTARQQLERLRIDEMTLAERLRRHTISAPSGWRVIE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHC
RSVEPGEWVTQGQKLAVIGDFDTLLVPLALSVREFEALKAMERIELTLPDSGTRISAVVE
CCCCCCHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH
RVSPDFDPATRKINVDLQVTGETGVLRGGIRTELALRMPDEGGAVAVPQSALTRAYEDWF
HHCCCCCCCCEEEEEEEEECCCCCEEECCCCEEEEEECCCCCCEEECCHHHHHHHHHCEE
LVRPDGERVRVLVLGPGEQAGTMRVRSAQVHAGDVFLVTPEAG
EECCCCCEEEEEEECCCCCCCCEEEEEEEEEECEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA