Click here to switch to the map view.

The map label for this gene is 78356604

Identifier: 78356604

GI number: 78356604

Start: 1579115

End: 1579774

Strand: Direct

Name: 78356604

Synonym: Dde_1561

Alternate gene names: NA

Gene position: 1579115-1579774 (Clockwise)

Preceding gene: 78356603

Following gene: 78356605

Centisome position: 42.33

GC content: 56.36

Gene sequence:

>660_bases
ATGCGATGTAGCCCATGCCGGATGCAGCAGGCACATACCCCCCCGCATAGCGCAAAGAGCATCAAGCATGATGTAAAGCG
CAGGATTATTCTTGATGCCGCCCGCCGGATGTTCGCACACGACGGTGCGGGCAGTGTTTCCATGCGTAATTTGGCACGTG
AGGTCGGATGCAGTGCCGCGGTGCTGTACCGGTATTTCGGAAGCAGGGAATCCATTCTGTGGGAACTGAGGTGTGAAGGT
ATCGTGTTGTTGAACGATGCCCTCATGGGGGCGGCAGATGCCGCCGACCCGTTGCTCAGGCTGCAGCAGCTTGGCAGGGC
GTATGTGTCTTTCGGGATTGATAATCTGGAATATTATGAGCTTATGTTTCGTACGCCGTTTTACGAATTCGATGCCGGCT
CGCTGCCGGACGGTCTGCCCGATGATGCTCTTGTGCTGCTGCACTCGACGGCAGCGGAATGTCTGGAACTGGGGTATTTT
GCCGGAAGCGATGTGACAACCGTGGTCAGCAGCATGTGGTCTCTGGTGCACGGGCTGGTAAGTCTGATACTGAATGGCAG
GGCTCCGCTGATGATGGGGGCGCTGGATACACATGCGATGATTGACAGGGTACCGGATTTTATTGCCGGTCTGGCACGGG
CTGCCAGAGGAGGAATATGA

Upstream 100 bases:

>100_bases
CGCGTTCTGACTGCAACCCGCAGGGCGCCGGAACAATCCGCTCTGCCGTAGTGCCGGCATCGCATTATAAAAAAAGTGAA
CACTGTTTACTTTTTTTATA

Downstream 100 bases:

>100_bases
TTGAGGGAAAAGGCGCTCCGGCGCTGAAGAAAATTCTGTTGCTTGCCGCATTTCTGGGAGTGTGGCAGGCGTGTTGTCTG
CCGTCCGCCGCACAGAGTGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRCSPCRMQQAHTPPHSAKSIKHDVKRRIILDAARRMFAHDGAGSVSMRNLAREVGCSAAVLYRYFGSRESILWELRCEG
IVLLNDALMGAADAADPLLRLQQLGRAYVSFGIDNLEYYELMFRTPFYEFDAGSLPDGLPDDALVLLHSTAAECLELGYF
AGSDVTTVVSSMWSLVHGLVSLILNGRAPLMMGALDTHAMIDRVPDFIAGLARAARGGI

Sequences:

>Translated_219_residues
MRCSPCRMQQAHTPPHSAKSIKHDVKRRIILDAARRMFAHDGAGSVSMRNLAREVGCSAAVLYRYFGSRESILWELRCEG
IVLLNDALMGAADAADPLLRLQQLGRAYVSFGIDNLEYYELMFRTPFYEFDAGSLPDGLPDDALVLLHSTAAECLELGYF
AGSDVTTVVSSMWSLVHGLVSLILNGRAPLMMGALDTHAMIDRVPDFIAGLARAARGGI
>Mature_219_residues
MRCSPCRMQQAHTPPHSAKSIKHDVKRRIILDAARRMFAHDGAGSVSMRNLAREVGCSAAVLYRYFGSRESILWELRCEG
IVLLNDALMGAADAADPLLRLQQLGRAYVSFGIDNLEYYELMFRTPFYEFDAGSLPDGLPDDALVLLHSTAAECLELGYF
AGSDVTTVVSSMWSLVHGLVSLILNGRAPLMMGALDTHAMIDRVPDFIAGLARAARGGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23960; Mature: 23960

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCSPCRMQQAHTPPHSAKSIKHDVKRRIILDAARRMFAHDGAGSVSMRNLAREVGCSAA
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
VLYRYFGSRESILWELRCEGIVLLNDALMGAADAADPLLRLQQLGRAYVSFGIDNLEYYE
HHHHHHCCCHHEEEEEECCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LMFRTPFYEFDAGSLPDGLPDDALVLLHSTAAECLELGYFAGSDVTTVVSSMWSLVHGLV
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SLILNGRAPLMMGALDTHAMIDRVPDFIAGLARAARGGI
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRCSPCRMQQAHTPPHSAKSIKHDVKRRIILDAARRMFAHDGAGSVSMRNLAREVGCSAA
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
VLYRYFGSRESILWELRCEGIVLLNDALMGAADAADPLLRLQQLGRAYVSFGIDNLEYYE
HHHHHHCCCHHEEEEEECCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LMFRTPFYEFDAGSLPDGLPDDALVLLHSTAAECLELGYFAGSDVTTVVSSMWSLVHGLV
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SLILNGRAPLMMGALDTHAMIDRVPDFIAGLARAARGGI
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA