| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is guaB [H]
Identifier: 78356516
GI number: 78356516
Start: 1491583
End: 1493040
Strand: Reverse
Name: guaB [H]
Synonym: Dde_1471
Alternate gene names: 78356516
Gene position: 1493040-1491583 (Counterclockwise)
Preceding gene: 78356518
Following gene: 78356515
Centisome position: 40.03
GC content: 57.61
Gene sequence:
>1458_bases ATGGGCACGATTCTTGGCAAAGCTCTGACATTTGACGATGTGCTGCTTGTCCCCGGCTACTCCGAGATCACGCCGGATCA GGTGGACGTTTCCACCATGCTGACCGCGCAGATCAAGCTGAACATCCCGCTTATCAGCGCCGCCATGGACACCGTTACAG AGTCTGCCATGGCCATCTCCATGGCGCGTAACGGCGGTGTGGGCGTCATCCACAAAAACATGACCATCGACGAGCAGCGG CTTGAAATCGAAAAGGTCAAAAAATCGGAAAGCGGCATGATCATCGATCCGGTGACCATAGCCCCCGACTACACTGTGGC GCAGGCGCTGCAGATCATGCGCGAATACCGCGTTTCCGGTCTGCCCGTTGTTAAAGACGCCGAACTGGTGGGCATACTGA CCAACCGCGATGTGCGTTTTGTCACCGATCTTGAAGGCACCAGAGTGCACGAAGTGATGACCAGCGAAGAACTGGTAACC GTGCCGGTGGGAACCACCCTGGATGAAGCCCGCCATCACCTGCATGAACACCGCATCGAAAAATTGCTTGTGGTTGATGA GAACAACAGACTCAAGGGTCTCATCACCATGAAAGACATCGACAAGGTGCAGAAATACCCGCAGGCATGCAAAGACGACA AAGGCCGTCTGCGTGTCGGTGCCGCCATCGGTGTGGGCGGCGAATGCGAAGCCCGCGCACAGGCCCTGCTCGGGGCCGGA GCCGACTTCCTCGTTCTTGATTCTGCCCACGGGCATTCGCAGAACATCCTCAAAACCGTGGAAATGGTGAAAAACACCTT CCCCGATTGCCAGCTTATCGCAGGTAACGTGGCTTCCTACGAAGGCGCCAAGGCGCTTTTCAAGGCAGGAGCCGACACTG TGAAAGTAGGCATCGGCCCCGGTTCCATCTGCACCACGCGTATCGTGGCCGGTGTGGGCGTGCCCCAGATCACGGCCATC ATGGAAGCCGTGCGTGCCGCCAGAGAATTCGGCCGCCACATCATTGCGGACGGCGGCATCAAATACTCCGGCGACATTGT CAAAGCCCTTGCCGTGGGTGCCAACACCGTCATGCTGGGTTCGCTGCTGGCAGGCACCGAGGAAAGCCCGGGTGAAACCG TGCTCTATCAGGGCCGCACCTACAAAATCTACCGCGGCATGGGATCCATCGACGCCATGAAGGACGGCAGCTCCGACCGC TACTTCCAGGAAAAGACCAAAAAACTGGTTCCCGAAGGCATCGTGGGACGTGTGCCCTACCGCGGACATGTGGGCGACAC GGTCTTTCAGCTGGTGGGCGGACTGCGTTCCGGTATGGGATACACCGGCGCGGCCACCATTGCAGAACTGGATGAAAAAG CACAGATGGTGCAGATTTCCGTTGCGGGTCTTCGTGAATCACACGTGCACGACGTGATCATCACCAAAGAAGCCCCCAAC TATAACATGGACAAGTAA
Upstream 100 bases:
>100_bases GATTTTAGACCGTTTCTTCCTCCACGGAAGCACGGCTCAGCGCAGACGGCGGCCTGCTTAAGGGCCGGCCGTCTGACGGA AACCTGTTTGGAGAAATATC
Downstream 100 bases:
>100_bases TCAACCGTCCCAAACGGAGCGCGTAACGCACGCCCCGGAGGAATAGAATGGAAAAGCAGAACAAAGTCATTATCGTGGAC TACGGTTCGCAGGTTACGCA
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MGTILGKALTFDDVLLVPGYSEITPDQVDVSTMLTAQIKLNIPLISAAMDTVTESAMAISMARNGGVGVIHKNMTIDEQR LEIEKVKKSESGMIIDPVTIAPDYTVAQALQIMREYRVSGLPVVKDAELVGILTNRDVRFVTDLEGTRVHEVMTSEELVT VPVGTTLDEARHHLHEHRIEKLLVVDENNRLKGLITMKDIDKVQKYPQACKDDKGRLRVGAAIGVGGECEARAQALLGAG ADFLVLDSAHGHSQNILKTVEMVKNTFPDCQLIAGNVASYEGAKALFKAGADTVKVGIGPGSICTTRIVAGVGVPQITAI MEAVRAAREFGRHIIADGGIKYSGDIVKALAVGANTVMLGSLLAGTEESPGETVLYQGRTYKIYRGMGSIDAMKDGSSDR YFQEKTKKLVPEGIVGRVPYRGHVGDTVFQLVGGLRSGMGYTGAATIAELDEKAQMVQISVAGLRESHVHDVIITKEAPN YNMDK
Sequences:
>Translated_485_residues MGTILGKALTFDDVLLVPGYSEITPDQVDVSTMLTAQIKLNIPLISAAMDTVTESAMAISMARNGGVGVIHKNMTIDEQR LEIEKVKKSESGMIIDPVTIAPDYTVAQALQIMREYRVSGLPVVKDAELVGILTNRDVRFVTDLEGTRVHEVMTSEELVT VPVGTTLDEARHHLHEHRIEKLLVVDENNRLKGLITMKDIDKVQKYPQACKDDKGRLRVGAAIGVGGECEARAQALLGAG ADFLVLDSAHGHSQNILKTVEMVKNTFPDCQLIAGNVASYEGAKALFKAGADTVKVGIGPGSICTTRIVAGVGVPQITAI MEAVRAAREFGRHIIADGGIKYSGDIVKALAVGANTVMLGSLLAGTEESPGETVLYQGRTYKIYRGMGSIDAMKDGSSDR YFQEKTKKLVPEGIVGRVPYRGHVGDTVFQLVGGLRSGMGYTGAATIAELDEKAQMVQISVAGLRESHVHDVIITKEAPN YNMDK >Mature_484_residues GTILGKALTFDDVLLVPGYSEITPDQVDVSTMLTAQIKLNIPLISAAMDTVTESAMAISMARNGGVGVIHKNMTIDEQRL EIEKVKKSESGMIIDPVTIAPDYTVAQALQIMREYRVSGLPVVKDAELVGILTNRDVRFVTDLEGTRVHEVMTSEELVTV PVGTTLDEARHHLHEHRIEKLLVVDENNRLKGLITMKDIDKVQKYPQACKDDKGRLRVGAAIGVGGECEARAQALLGAGA DFLVLDSAHGHSQNILKTVEMVKNTFPDCQLIAGNVASYEGAKALFKAGADTVKVGIGPGSICTTRIVAGVGVPQITAIM EAVRAAREFGRHIIADGGIKYSGDIVKALAVGANTVMLGSLLAGTEESPGETVLYQGRTYKIYRGMGSIDAMKDGSSDRY FQEKTKKLVPEGIVGRVPYRGHVGDTVFQLVGGLRSGMGYTGAATIAELDEKAQMVQISVAGLRESHVHDVIITKEAPNY NMDK
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=453, Percent_Identity=42.1633554083885, Blast_Score=338, Evalue=6e-93, Organism=Homo sapiens, GI217035146, Length=450, Percent_Identity=42.8888888888889, Blast_Score=338, Evalue=7e-93, Organism=Homo sapiens, GI156616279, Length=450, Percent_Identity=42.8888888888889, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI34328930, Length=450, Percent_Identity=42.8888888888889, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI34328928, Length=450, Percent_Identity=42.8888888888889, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI217035152, Length=446, Percent_Identity=42.8251121076233, Blast_Score=331, Evalue=7e-91, Organism=Homo sapiens, GI217035148, Length=450, Percent_Identity=42, Blast_Score=325, Evalue=4e-89, Organism=Homo sapiens, GI217035150, Length=450, Percent_Identity=40.2222222222222, Blast_Score=303, Evalue=3e-82, Organism=Homo sapiens, GI50541954, Length=218, Percent_Identity=41.2844036697248, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI50541952, Length=218, Percent_Identity=41.2844036697248, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI50541948, Length=218, Percent_Identity=41.2844036697248, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI50541956, Length=218, Percent_Identity=41.2844036697248, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI156104880, Length=218, Percent_Identity=39.4495412844037, Blast_Score=169, Evalue=5e-42, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=55.9670781893004, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI1786293, Length=223, Percent_Identity=39.0134529147982, Blast_Score=161, Evalue=1e-40, Organism=Caenorhabditis elegans, GI71994385, Length=471, Percent_Identity=36.3057324840764, Blast_Score=279, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71994389, Length=419, Percent_Identity=38.1861575178998, Blast_Score=268, Evalue=5e-72, Organism=Caenorhabditis elegans, GI17560440, Length=237, Percent_Identity=37.1308016877637, Blast_Score=171, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6323585, Length=458, Percent_Identity=41.2663755458515, Blast_Score=328, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6322012, Length=458, Percent_Identity=41.0480349344978, Blast_Score=322, Evalue=1e-88, Organism=Saccharomyces cerevisiae, GI6323464, Length=458, Percent_Identity=41.4847161572052, Blast_Score=318, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=41.1242603550296, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6319353, Length=116, Percent_Identity=42.2413793103448, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24641071, Length=455, Percent_Identity=41.0989010989011, Blast_Score=332, Evalue=5e-91, Organism=Drosophila melanogaster, GI24641073, Length=455, Percent_Identity=41.0989010989011, Blast_Score=332, Evalue=5e-91, Organism=Drosophila melanogaster, GI28571163, Length=412, Percent_Identity=41.0194174757282, Blast_Score=290, Evalue=2e-78,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52097; Mature: 51966
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTILGKALTFDDVLLVPGYSEITPDQVDVSTMLTAQIKLNIPLISAAMDTVTESAMAIS CCCCCCCEECCCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHEEE MARNGGVGVIHKNMTIDEQRLEIEKVKKSESGMIIDPVTIAPDYTVAQALQIMREYRVSG EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECEEECCCHHHHHHHHHHHHHCCCC LPVVKDAELVGILTNRDVRFVTDLEGTRVHEVMTSEELVTVPVGTTLDEARHHLHEHRIE CCEEECCEEEEEEECCCEEEEECCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH KLLVVDENNRLKGLITMKDIDKVQKYPQACKDDKGRLRVGAAIGVGGECEARAQALLGAG EEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCC ADFLVLDSAHGHSQNILKTVEMVKNTFPDCQLIAGNVASYEGAKALFKAGADTVKVGIGP CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCC GSICTTRIVAGVGVPQITAIMEAVRAAREFGRHIIADGGIKYSGDIVKALAVGANTVMLG CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEECCHHHHHHHHCCCHHHHH SLLAGTEESPGETVLYQGRTYKIYRGMGSIDAMKDGSSDRYFQEKTKKLVPEGIVGRVPY HHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC RGHVGDTVFQLVGGLRSGMGYTGAATIAELDEKAQMVQISVAGLRESHVHDVIITKEAPN CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCC YNMDK CCCCC >Mature Secondary Structure GTILGKALTFDDVLLVPGYSEITPDQVDVSTMLTAQIKLNIPLISAAMDTVTESAMAIS CCCCCCEECCCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHEEE MARNGGVGVIHKNMTIDEQRLEIEKVKKSESGMIIDPVTIAPDYTVAQALQIMREYRVSG EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECEEECCCHHHHHHHHHHHHHCCCC LPVVKDAELVGILTNRDVRFVTDLEGTRVHEVMTSEELVTVPVGTTLDEARHHLHEHRIE CCEEECCEEEEEEECCCEEEEECCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH KLLVVDENNRLKGLITMKDIDKVQKYPQACKDDKGRLRVGAAIGVGGECEARAQALLGAG EEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCC ADFLVLDSAHGHSQNILKTVEMVKNTFPDCQLIAGNVASYEGAKALFKAGADTVKVGIGP CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCC GSICTTRIVAGVGVPQITAIMEAVRAAREFGRHIIADGGIKYSGDIVKALAVGANTVMLG CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEECCHHHHHHHHCCCHHHHH SLLAGTEESPGETVLYQGRTYKIYRGMGSIDAMKDGSSDRYFQEKTKKLVPEGIVGRVPY HHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC RGHVGDTVFQLVGGLRSGMGYTGAATIAELDEKAQMVQISVAGLRESHVHDVIITKEAPN CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCC YNMDK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]