| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is argD [H]
Identifier: 78356471
GI number: 78356471
Start: 1452199
End: 1453401
Strand: Direct
Name: argD [H]
Synonym: Dde_1426
Alternate gene names: 78356471
Gene position: 1452199-1453401 (Clockwise)
Preceding gene: 78356470
Following gene: 78356472
Centisome position: 38.93
GC content: 59.93
Gene sequence:
>1203_bases ATGACTACGTTCGATGAATTGAAACAGCGTGAAGAATCTCTGCTCTGCAGAACATACGGCAGATATCCGCTGGCTGTTGC GTCCGCCCGGGGCAGTGTTCTGACAGATTTTTCCGGCAGGGAATACATTGACCTGCTTTCAGGCATAGCCGTTACCAATC TGGGACATTGCCATCCCGCTCTTGCAGAGGTCATGCACGCGCAGGCCGGCAGGCTGGTGCATCTTTCCAATCTGTTTTAC CAGCAGGAACAGCTGGAGCTGGCGGAAAAACTGCTCGGCACCACCCATCTGGGCAAGGCGTTTTTCTGCAATTCCGGCGC AGAAGCCAACGAAGCGGCCATAAAGCTGGCCCGCCGCTATGCGCAGCGGGTCAAGGAACGCGATGCCGGTACGGTGATAA CGCTTACAGGCGCTTTTCACGGCAGAACGCTTGCCACTGTGGCAGCCACGGGGCAGGCAAAGTTTCAGGACGGCTTTGCG CCCATCCCGCAGGGTTTCCGGCAGGTGGAGTGGGGCAGCCTGGATGCGCTGGAAGCGGCCATGGATGACGACGTGGTGGC CGTGCTGGCCGAAATTGTGCAAGGCGAAGGCGGTATCCGCCCCATGACCCCGGAATATGCACAGGGTGTGCAGGATATCT GCCGCCGTCACGGGGTGCTTTTCATGGTGGACGAAGTGCAGTCGGGCATGTGCCGTACCGGAAGGTTCTGGGCTTTTCAG CATTACGGACTGACGCCCGATGTGGTCACCAGCGCCAAGGCGCTGGCCAACGGGCTGCCCATGGGAGCCATGCTGGCCAC CGACGAAGCCGCTAAAGGGTTTGAACCCGGCAGCCACGCCACCACCTTTGGCGCCGGAGCTCTTGTTTCGGCTGTGGCGG CCCGTGTTGTGGATATCATGCAGCAGGAAAAGCTTGCCGAACGCGCCGATCGGGTGGGCGGGGCTTTCATGGCTGATGTG CGCAGTCTGGCCGCCCGTCTGCCCGGTACCATACAGGAGGTACGCGGGCTGGGGCTTATGATAGGCATTGTGCTGACATT TCCCGGCAGGGAAGTGTGGGAAGAGCTGCTCCGGCGCGGTTTTGTGCTTAATCTGACGCAGGAACGGGTATTGCGCCTGT TGCCTGCGCTGACAGTGCCGGAAACGTACCTGCAGGACTTTCTGACTGCGCTGGAAGAAATACTGAGCGAGCGCACTGTA TAG
Upstream 100 bases:
>100_bases GCTGGGCGATACGCAGCGCGGAACCGGCGGCTTCGGTCATACGGGACGTATCTGATCCCGTCTTTTTCTCAGCTTTTTTC CGGCACAGGAGTGCATTGCA
Downstream 100 bases:
>100_bases TTTTTCACCGGTACTTTTTGATCTGGTGATGAAATTGTCAACGGTGCAGCCTGATGCGGGCTGCACCGTTTTTTTGTGCC TTTCCGCCAGCAGGGCGGAA
Product: acetylornithine aminotransferase
Products: NA
Alternate protein names: ACOAT [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTTFDELKQREESLLCRTYGRYPLAVASARGSVLTDFSGREYIDLLSGIAVTNLGHCHPALAEVMHAQAGRLVHLSNLFY QQEQLELAEKLLGTTHLGKAFFCNSGAEANEAAIKLARRYAQRVKERDAGTVITLTGAFHGRTLATVAATGQAKFQDGFA PIPQGFRQVEWGSLDALEAAMDDDVVAVLAEIVQGEGGIRPMTPEYAQGVQDICRRHGVLFMVDEVQSGMCRTGRFWAFQ HYGLTPDVVTSAKALANGLPMGAMLATDEAAKGFEPGSHATTFGAGALVSAVAARVVDIMQQEKLAERADRVGGAFMADV RSLAARLPGTIQEVRGLGLMIGIVLTFPGREVWEELLRRGFVLNLTQERVLRLLPALTVPETYLQDFLTALEEILSERTV
Sequences:
>Translated_400_residues MTTFDELKQREESLLCRTYGRYPLAVASARGSVLTDFSGREYIDLLSGIAVTNLGHCHPALAEVMHAQAGRLVHLSNLFY QQEQLELAEKLLGTTHLGKAFFCNSGAEANEAAIKLARRYAQRVKERDAGTVITLTGAFHGRTLATVAATGQAKFQDGFA PIPQGFRQVEWGSLDALEAAMDDDVVAVLAEIVQGEGGIRPMTPEYAQGVQDICRRHGVLFMVDEVQSGMCRTGRFWAFQ HYGLTPDVVTSAKALANGLPMGAMLATDEAAKGFEPGSHATTFGAGALVSAVAARVVDIMQQEKLAERADRVGGAFMADV RSLAARLPGTIQEVRGLGLMIGIVLTFPGREVWEELLRRGFVLNLTQERVLRLLPALTVPETYLQDFLTALEEILSERTV >Mature_399_residues TTFDELKQREESLLCRTYGRYPLAVASARGSVLTDFSGREYIDLLSGIAVTNLGHCHPALAEVMHAQAGRLVHLSNLFYQ QEQLELAEKLLGTTHLGKAFFCNSGAEANEAAIKLARRYAQRVKERDAGTVITLTGAFHGRTLATVAATGQAKFQDGFAP IPQGFRQVEWGSLDALEAAMDDDVVAVLAEIVQGEGGIRPMTPEYAQGVQDICRRHGVLFMVDEVQSGMCRTGRFWAFQH YGLTPDVVTSAKALANGLPMGAMLATDEAAKGFEPGSHATTFGAGALVSAVAARVVDIMQQEKLAERADRVGGAFMADVR SLAARLPGTIQEVRGLGLMIGIVLTFPGREVWEELLRRGFVLNLTQERVLRLLPALTVPETYLQDFLTALEEILSERTV
Specific function: Catalyzes The Transmination Of N(2)-Succinylornithine And Alpha-Ketoglutarate Into N(2)-Succinylglutamate Semialdehyde And Glutamate. Can Also Act As A Acetylornithine Aminotransferase. [C]
COG id: COG4992
COG function: function code E; Ornithine/acetylornithine aminotransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=402, Percent_Identity=33.0845771144279, Blast_Score=231, Evalue=9e-61, Organism=Homo sapiens, GI284507298, Length=303, Percent_Identity=34.983498349835, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI13994255, Length=381, Percent_Identity=29.9212598425197, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI37574042, Length=426, Percent_Identity=28.8732394366197, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI24119277, Length=372, Percent_Identity=30.9139784946237, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI226442709, Length=395, Percent_Identity=29.3670886075949, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI226442705, Length=426, Percent_Identity=28.169014084507, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI188536080, Length=435, Percent_Identity=25.2873563218391, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI38679950, Length=435, Percent_Identity=25.2873563218391, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI38679946, Length=435, Percent_Identity=25.2873563218391, Blast_Score=119, Evalue=7e-27, Organism=Escherichia coli, GI1788044, Length=397, Percent_Identity=39.0428211586902, Blast_Score=294, Evalue=8e-81, Organism=Escherichia coli, GI1789759, Length=389, Percent_Identity=39.3316195372751, Blast_Score=273, Evalue=1e-74, Organism=Escherichia coli, GI145693181, Length=368, Percent_Identity=34.2391304347826, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1787560, Length=426, Percent_Identity=32.8638497652582, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI1789016, Length=430, Percent_Identity=30.4651162790698, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1786991, Length=344, Percent_Identity=31.1046511627907, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786349, Length=255, Percent_Identity=28.2352941176471, Blast_Score=96, Evalue=5e-21, Organism=Caenorhabditis elegans, GI25144271, Length=383, Percent_Identity=33.420365535248, Blast_Score=231, Evalue=5e-61, Organism=Caenorhabditis elegans, GI32564660, Length=372, Percent_Identity=31.989247311828, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI25144274, Length=272, Percent_Identity=31.9852941176471, Blast_Score=156, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71992977, Length=446, Percent_Identity=30.7174887892377, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17541228, Length=454, Percent_Identity=26.2114537444934, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71981843, Length=174, Percent_Identity=32.183908045977, Blast_Score=102, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6324432, Length=401, Percent_Identity=32.1695760598504, Blast_Score=240, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6323470, Length=410, Percent_Identity=31.9512195121951, Blast_Score=212, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6324386, Length=439, Percent_Identity=24.373576309795, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6321456, Length=431, Percent_Identity=23.8979118329466, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI21357415, Length=395, Percent_Identity=31.6455696202532, Blast_Score=212, Evalue=3e-55, Organism=Drosophila melanogaster, GI28574759, Length=436, Percent_Identity=27.7522935779816, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI161085790, Length=450, Percent_Identity=27.7777777777778, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI21356575, Length=443, Percent_Identity=29.1196388261851, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI281366494, Length=394, Percent_Identity=24.3654822335025, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24667139, Length=394, Percent_Identity=24.3654822335025, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24667143, Length=394, Percent_Identity=24.3654822335025, Blast_Score=105, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004636 - InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.11 [H]
Molecular weight: Translated: 43451; Mature: 43320
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFDELKQREESLLCRTYGRYPLAVASARGSVLTDFSGREYIDLLSGIAVTNLGHCHPA CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHH LAEVMHAQAGRLVHLSNLFYQQEQLELAEKLLGTTHLGKAFFCNSGAEANEAAIKLARRY HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHH AQRVKERDAGTVITLTGAFHGRTLATVAATGQAKFQDGFAPIPQGFRQVEWGSLDALEAA HHHHHHCCCCCEEEEECCCCCCCHHHHEECCCHHHCCCCCCHHHHHHHCCCCCHHHHHHH MDDDVVAVLAEIVQGEGGIRPMTPEYAQGVQDICRRHGVLFMVDEVQSGMCRTGRFWAFQ CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCEEEEE HYGLTPDVVTSAKALANGLPMGAMLATDEAAKGFEPGSHATTFGAGALVSAVAARVVDIM CCCCCHHHHHHHHHHHCCCCCCHHEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QQEKLAERADRVGGAFMADVRSLAARLPGTIQEVRGLGLMIGIVLTFPGREVWEELLRRG HHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC FVLNLTQERVLRLLPALTVPETYLQDFLTALEEILSERTV CEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTFDELKQREESLLCRTYGRYPLAVASARGSVLTDFSGREYIDLLSGIAVTNLGHCHPA CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHH LAEVMHAQAGRLVHLSNLFYQQEQLELAEKLLGTTHLGKAFFCNSGAEANEAAIKLARRY HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHH AQRVKERDAGTVITLTGAFHGRTLATVAATGQAKFQDGFAPIPQGFRQVEWGSLDALEAA HHHHHHCCCCCEEEEECCCCCCCHHHHEECCCHHHCCCCCCHHHHHHHCCCCCHHHHHHH MDDDVVAVLAEIVQGEGGIRPMTPEYAQGVQDICRRHGVLFMVDEVQSGMCRTGRFWAFQ CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCEEEEE HYGLTPDVVTSAKALANGLPMGAMLATDEAAKGFEPGSHATTFGAGALVSAVAARVVDIM CCCCCHHHHHHHHHHHCCCCCCHHEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH QQEKLAERADRVGGAFMADVRSLAARLPGTIQEVRGLGLMIGIVLTFPGREVWEELLRRG HHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC FVLNLTQERVLRLLPALTVPETYLQDFLTALEEILSERTV CEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]