| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is dut [H]
Identifier: 78356470
GI number: 78356470
Start: 1451644
End: 1452153
Strand: Direct
Name: dut [H]
Synonym: Dde_1425
Alternate gene names: 78356470
Gene position: 1451644-1452153 (Clockwise)
Preceding gene: 78356466
Following gene: 78356471
Centisome position: 38.92
GC content: 62.35
Gene sequence:
>510_bases GTGAGCAAAACAGACGATCAGGGCTGTGTCCAGCCCCGTATAGCCGTCCGCTTCAGGTATATGGGCAACGCGCAGGAGTT GTATGAAAACGGTGAAGCCGGGGATGCGCCGCAGTACGCCACCCCCTGTTCCGCCGGGCTTGACCTGCGGGCCTGTATGG AAAGCGACGAGGCTGTCATTCCTGCCGGAGGGCGGCTGGCGATACCCGCGGGCATCGCCGTGGAGCCCATGGTGCAGGGC GTGGCCGGATTTGTGTATTCGCGCAGCGGGCTGGGAACCAAAAAAGGGCTTACTGTCAGTCAGGGCGTGGGGGTCATCGA TCCGGACTACCGCGGCGAAATCATTGTGTCATTGCTGAACACCTCGGGCGGGGAACAGCGGCTGCGACGAGGCGAGCGTA TCGCGCAGCTTGTGTTTCAGCCTTTCTTTCAGGCCGAACTGCAGCAGGTTGCAGAGCTGGGCGATACGCAGCGCGGAACC GGCGGCTTCGGTCATACGGGACGTATCTGA
Upstream 100 bases:
>100_bases AGATTTTGACTTGCCTTGCCGAGTGTCATAACACTTTCTTTTCCGTGCTGCCTTTCGGGCTGCACGGTAGTGTGCAATTA CCCTTCATCAGGAGCATTCT
Downstream 100 bases:
>100_bases TCCCGTCTTTTTCTCAGCTTTTTTCCGGCACAGGAGTGCATTGCAATGACTACGTTCGATGAATTGAAACAGCGTGAAGA ATCTCTGCTCTGCAGAACAT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSKTDDQGCVQPRIAVRFRYMGNAQELYENGEAGDAPQYATPCSAGLDLRACMESDEAVIPAGGRLAIPAGIAVEPMVQG VAGFVYSRSGLGTKKGLTVSQGVGVIDPDYRGEIIVSLLNTSGGEQRLRRGERIAQLVFQPFFQAELQQVAELGDTQRGT GGFGHTGRI
Sequences:
>Translated_169_residues MSKTDDQGCVQPRIAVRFRYMGNAQELYENGEAGDAPQYATPCSAGLDLRACMESDEAVIPAGGRLAIPAGIAVEPMVQG VAGFVYSRSGLGTKKGLTVSQGVGVIDPDYRGEIIVSLLNTSGGEQRLRRGERIAQLVFQPFFQAELQQVAELGDTQRGT GGFGHTGRI >Mature_168_residues SKTDDQGCVQPRIAVRFRYMGNAQELYENGEAGDAPQYATPCSAGLDLRACMESDEAVIPAGGRLAIPAGIAVEPMVQGV AGFVYSRSGLGTKKGLTVSQGVGVIDPDYRGEIIVSLLNTSGGEQRLRRGERIAQLVFQPFFQAELQQVAELGDTQRGTG GFGHTGRI
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=142, Percent_Identity=36.6197183098592, Blast_Score=81, Evalue=4e-16, Organism=Homo sapiens, GI4503423, Length=142, Percent_Identity=36.6197183098592, Blast_Score=81, Evalue=5e-16, Organism=Homo sapiens, GI70906441, Length=142, Percent_Identity=36.6197183098592, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1790071, Length=132, Percent_Identity=43.1818181818182, Blast_Score=111, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71988561, Length=168, Percent_Identity=36.9047619047619, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319729, Length=133, Percent_Identity=36.0902255639098, Blast_Score=71, Evalue=7e-14, Organism=Drosophila melanogaster, GI19921126, Length=131, Percent_Identity=38.1679389312977, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24583610, Length=131, Percent_Identity=38.1679389312977, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 17964; Mature: 17832
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTDDQGCVQPRIAVRFRYMGNAQELYENGEAGDAPQYATPCSAGLDLRACMESDEAVI CCCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEE PAGGRLAIPAGIAVEPMVQGVAGFVYSRSGLGTKKGLTVSQGVGVIDPDYRGEIIVSLLN CCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC TSGGEQRLRRGERIAQLVFQPFFQAELQQVAELGDTQRGTGGFGHTGRI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SKTDDQGCVQPRIAVRFRYMGNAQELYENGEAGDAPQYATPCSAGLDLRACMESDEAVI CCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEE PAGGRLAIPAGIAVEPMVQGVAGFVYSRSGLGTKKGLTVSQGVGVIDPDYRGEIIVSLLN CCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC TSGGEQRLRRGERIAQLVFQPFFQAELQQVAELGDTQRGTGGFGHTGRI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA