| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is glgP [H]
Identifier: 78356469
GI number: 78356469
Start: 1448849
End: 1451413
Strand: Reverse
Name: glgP [H]
Synonym: Dde_1424
Alternate gene names: 78356469
Gene position: 1451413-1448849 (Counterclockwise)
Preceding gene: 78356478
Following gene: 78356468
Centisome position: 38.91
GC content: 58.13
Gene sequence:
>2565_bases ATGCACCCCGTAAAGGTATTCAATGTCACTCCCCGGCTTCCGGAAGGGCTGGAACCGCTGTGGGATCTGGCGTACAATTT CTGGTTTGCGTGGAACGCAGGCATAGAAGAGCTTTTTGCCCAGATAGACTACAGGTTGTGGCAGCGCTGCGCCAAAAACC CCGTTGAATTTCTGAACAATGTCCCTCAGGCAACGCTGCGGGAACTGGCCGCGGACGCCATCTACAAGGAACGTCTTGCA GAAGCTCACCAGCAGCTGCAACGTTATCTGGGCGCTCCGGTGGACAAAGACTTTCATATTGAAGACGAACGCCAGCCGGT GGTTGCCTATTTCAGTCTCGAATTCGGCGTTTCCACCTGTCTGCCCATTTATTCCGGCGGGCTGGGCATTCTTGCCGGCG ATCATCTGAAATCTGCCAGCGACCTGAATCTGCCGCTTATCGGTATCGGACTGGCATACCGGCAGGGGTACTTCCGCCAG TACATGACCCCCGACGGCTGGCAGCAGGAGCGCTACCCCGACTATGATTTTGAACAGATGCCCCTGACAGCGGCCACGGC ACCGGACGGCACCGCAGCCATGGTGCGGCTGAACATAGGCGACCGCCCCCTTGCCGCACGCATATGGAAAGCACAGGTGG GCAGAGTGGCCCTGTACCTGCTGGACACCAATATTCCAGAAAACCCGCCGGATTTCCGTGAAGTAACCGCGCGCCTGTAC GGCGGCGGACTGGAAATGCGTCTGTGGCAGGAGATACTTATAGGCATAGGCGGCATAAAGGCATTGGAAGCGCTGGGGCT GAACCCCAAAGTCATACACATGAACGAGGGACATTCCGCCTTTGCCGGGCTGGAACGCGTGCGCCTGTTCATGAAAAACT GCGGACTGTCTTTCGAGGCGGCGCTGGAGCTGGCGGCCTCAAGTTCCGTATTTACCACGCACACCCCCGTGCCCGCCGGC AACGACCGTTTTCCGCCGGACCTCATGCAGCGCTATTTCGAACCGTATTCCCGCGATATGGGGCTTGCCTTCAAGGTTTT TCTGGCCCTCGGCAGAGAAAACCCGCACGACGACGGCGAACCTTTCTGCATGACCGTGCTTGCGCTCAGACTTTCGCGGT TCAACAACGGCGTGTCCATATTGCACGGCAAAGTTTCGCGCAACATGTGGAAACAGGTCTGGAACCAGTATCCGGTGGAA GACATTCCCATAGGCGCTCTGACCAACGGAGTTCACGCTCCTTCGTGGGTAGCCCCCGACATACAGTCGCTGTTCGACAG ATATCTGGGCCCCAACTGGCGCGAAGATCCGGACTGCCAGCGCGTATGGGGGCAGGCGGACAGCATATCCGACGCGGAGC TGTGGCGCACGCACGAAAGGCTGCGCGCACGGCTCGTGGACTATGTCCGCGGCAGACTTATCCGTCAGCTTACAGCGCAG GGGGCCCGCAAAGCAGACCTGCAGGTGGCGCAGGAGGTGCTCAATCCCGAAGCCCTGACCATAGGCTTTTCACGCCGTTT TGCCACATACAAGCGGGCCAACCTGCTGCTGCAGAACAAAGAACGCCTTATCAGGCTGGTCACGGACAAGGAACGTCCCG TGCAGTTCATCTTTGCCGGCAAAGCCCACCCGCAGGATCAGGCCGGCAAACAGATAATCAAGGAAATAATATCCCTGTGC CGCACGGAAGAATGCCGCTACAGCATGGTCTTTCTGGAAGACTACGACATGGACGTGGCGGCGCATCTTGTTTCCGGCTG CGACATATGGCTCAACAATCCCCGCAGACCGCTGGAAGCCTGCGGCACCAGCGGCATGAAAGCCATGCTCAACGGCGTGC TGCAGTTCAGCACTCTGGACGGATGGTGGGACGAAGCCTACCTGCCCGACAACAGCCTGGGATGGGCCATAGGCAAAGGT GAAGAATACGAAGACCTTGAATATCAGGATTTCGTGGAAATACAGACTCTCTACAATATTCTTGAAAAAGATATTGTTCC GGAGTTTTACGACCGCGGACACGGCGGCATGCCGCGCGCATGGGTGGGCCGCATGAAAAATGCCATCAGGCAGCTGGGCC CCAGGTTCAACTCGCACCGCATGGTGGAAGACTATAAGGCCACGGCCTATCTGCCCGCATATGAAAACTACCTGCGGCTT ACCAGCGACAGTTTCGCCCGTGCCCGCGAACTGGCATCATGGCGCATGGACATGATGACCCGCTGGGGGCAGGTGTCCAT ACACAACGTGCGTGCCTACGAACACGAATCCATACATGTGGGACAGACAGTGACGGTGGAAGCCGCCGTAGCGCTGAACG GCATAGCCCCCGAAAGCATTCTTGTAGAAGTATACGCAGGGCCGGTGGGGCTGGACGGCAGTTTTGCCGGCAGGACCATC TATCCCATGGAACCGGCCGAAGAAACACAGGACGGTATGAGAATGTACAGAGGAAAGGCAACCCCGCTCGAAGCAGGCAG GTTCGGCTTTACCGTGCGGGCCGTGCCGTCTCATCCGCTGCTGCTTGACCCCCATTCGCTCGGGCTCATACGCTGGGCTT CATAA
Upstream 100 bases:
>100_bases CATACCCGCGGAACAAGGTATCTTCACCGGAAACACCGTACCGTAACCGGTACCCAAAGGCACATCCGTGCACCTGAACG CGATACGCAGGAGGTCGCAC
Downstream 100 bases:
>100_bases CACCAACGGCGCACCCCGCACACAGGGGCGGGGTGCGCCACAGCTCACAAAGGCCCTGAGCATGCTGCACCGATTGCTGT TCATCTGCTGCCTGCTTGCA
Product: Alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MHPVKVFNVTPRLPEGLEPLWDLAYNFWFAWNAGIEELFAQIDYRLWQRCAKNPVEFLNNVPQATLRELAADAIYKERLA EAHQQLQRYLGAPVDKDFHIEDERQPVVAYFSLEFGVSTCLPIYSGGLGILAGDHLKSASDLNLPLIGIGLAYRQGYFRQ YMTPDGWQQERYPDYDFEQMPLTAATAPDGTAAMVRLNIGDRPLAARIWKAQVGRVALYLLDTNIPENPPDFREVTARLY GGGLEMRLWQEILIGIGGIKALEALGLNPKVIHMNEGHSAFAGLERVRLFMKNCGLSFEAALELAASSSVFTTHTPVPAG NDRFPPDLMQRYFEPYSRDMGLAFKVFLALGRENPHDDGEPFCMTVLALRLSRFNNGVSILHGKVSRNMWKQVWNQYPVE DIPIGALTNGVHAPSWVAPDIQSLFDRYLGPNWREDPDCQRVWGQADSISDAELWRTHERLRARLVDYVRGRLIRQLTAQ GARKADLQVAQEVLNPEALTIGFSRRFATYKRANLLLQNKERLIRLVTDKERPVQFIFAGKAHPQDQAGKQIIKEIISLC RTEECRYSMVFLEDYDMDVAAHLVSGCDIWLNNPRRPLEACGTSGMKAMLNGVLQFSTLDGWWDEAYLPDNSLGWAIGKG EEYEDLEYQDFVEIQTLYNILEKDIVPEFYDRGHGGMPRAWVGRMKNAIRQLGPRFNSHRMVEDYKATAYLPAYENYLRL TSDSFARARELASWRMDMMTRWGQVSIHNVRAYEHESIHVGQTVTVEAAVALNGIAPESILVEVYAGPVGLDGSFAGRTI YPMEPAEETQDGMRMYRGKATPLEAGRFGFTVRAVPSHPLLLDPHSLGLIRWAS
Sequences:
>Translated_854_residues MHPVKVFNVTPRLPEGLEPLWDLAYNFWFAWNAGIEELFAQIDYRLWQRCAKNPVEFLNNVPQATLRELAADAIYKERLA EAHQQLQRYLGAPVDKDFHIEDERQPVVAYFSLEFGVSTCLPIYSGGLGILAGDHLKSASDLNLPLIGIGLAYRQGYFRQ YMTPDGWQQERYPDYDFEQMPLTAATAPDGTAAMVRLNIGDRPLAARIWKAQVGRVALYLLDTNIPENPPDFREVTARLY GGGLEMRLWQEILIGIGGIKALEALGLNPKVIHMNEGHSAFAGLERVRLFMKNCGLSFEAALELAASSSVFTTHTPVPAG NDRFPPDLMQRYFEPYSRDMGLAFKVFLALGRENPHDDGEPFCMTVLALRLSRFNNGVSILHGKVSRNMWKQVWNQYPVE DIPIGALTNGVHAPSWVAPDIQSLFDRYLGPNWREDPDCQRVWGQADSISDAELWRTHERLRARLVDYVRGRLIRQLTAQ GARKADLQVAQEVLNPEALTIGFSRRFATYKRANLLLQNKERLIRLVTDKERPVQFIFAGKAHPQDQAGKQIIKEIISLC RTEECRYSMVFLEDYDMDVAAHLVSGCDIWLNNPRRPLEACGTSGMKAMLNGVLQFSTLDGWWDEAYLPDNSLGWAIGKG EEYEDLEYQDFVEIQTLYNILEKDIVPEFYDRGHGGMPRAWVGRMKNAIRQLGPRFNSHRMVEDYKATAYLPAYENYLRL TSDSFARARELASWRMDMMTRWGQVSIHNVRAYEHESIHVGQTVTVEAAVALNGIAPESILVEVYAGPVGLDGSFAGRTI YPMEPAEETQDGMRMYRGKATPLEAGRFGFTVRAVPSHPLLLDPHSLGLIRWAS >Mature_854_residues MHPVKVFNVTPRLPEGLEPLWDLAYNFWFAWNAGIEELFAQIDYRLWQRCAKNPVEFLNNVPQATLRELAADAIYKERLA EAHQQLQRYLGAPVDKDFHIEDERQPVVAYFSLEFGVSTCLPIYSGGLGILAGDHLKSASDLNLPLIGIGLAYRQGYFRQ YMTPDGWQQERYPDYDFEQMPLTAATAPDGTAAMVRLNIGDRPLAARIWKAQVGRVALYLLDTNIPENPPDFREVTARLY GGGLEMRLWQEILIGIGGIKALEALGLNPKVIHMNEGHSAFAGLERVRLFMKNCGLSFEAALELAASSSVFTTHTPVPAG NDRFPPDLMQRYFEPYSRDMGLAFKVFLALGRENPHDDGEPFCMTVLALRLSRFNNGVSILHGKVSRNMWKQVWNQYPVE DIPIGALTNGVHAPSWVAPDIQSLFDRYLGPNWREDPDCQRVWGQADSISDAELWRTHERLRARLVDYVRGRLIRQLTAQ GARKADLQVAQEVLNPEALTIGFSRRFATYKRANLLLQNKERLIRLVTDKERPVQFIFAGKAHPQDQAGKQIIKEIISLC RTEECRYSMVFLEDYDMDVAAHLVSGCDIWLNNPRRPLEACGTSGMKAMLNGVLQFSTLDGWWDEAYLPDNSLGWAIGKG EEYEDLEYQDFVEIQTLYNILEKDIVPEFYDRGHGGMPRAWVGRMKNAIRQLGPRFNSHRMVEDYKATAYLPAYENYLRL TSDSFARARELASWRMDMMTRWGQVSIHNVRAYEHESIHVGQTVTVEAAVALNGIAPESILVEVYAGPVGLDGSFAGRTI YPMEPAEETQDGMRMYRGKATPLEAGRFGFTVRAVPSHPLLLDPHSLGLIRWAS
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI2367228, Length=424, Percent_Identity=25, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI32566204, Length=587, Percent_Identity=23.5093696763203, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17564550, Length=587, Percent_Identity=23.5093696763203, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI78706832, Length=516, Percent_Identity=21.8992248062016, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24581010, Length=516, Percent_Identity=21.8992248062016, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 96811; Mature: 96811
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPVKVFNVTPRLPEGLEPLWDLAYNFWFAWNAGIEELFAQIDYRLWQRCAKNPVEFLNN CCCEEEEECCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHC VPQATLRELAADAIYKERLAEAHQQLQRYLGAPVDKDFHIEDERQPVVAYFSLEFGVSTC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHCHHHH LPIYSGGLGILAGDHLKSASDLNLPLIGIGLAYRQGYFRQYMTPDGWQQERYPDYDFEQM HHHHCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PLTAATAPDGTAAMVRLNIGDRPLAARIWKAQVGRVALYLLDTNIPENPPDFREVTARLY CEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHH GGGLEMRLWQEILIGIGGIKALEALGLNPKVIHMNEGHSAFAGLERVRLFMKNCGLSFEA CCCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHH ALELAASSSVFTTHTPVPAGNDRFPPDLMQRYFEPYSRDMGLAFKVFLALGRENPHDDGE HHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC PFCMTVLALRLSRFNNGVSILHGKVSRNMWKQVWNQYPVEDIPIGALTNGVHAPSWVAPD HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHH IQSLFDRYLGPNWREDPDCQRVWGQADSISDAELWRTHERLRARLVDYVRGRLIRQLTAQ HHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GARKADLQVAQEVLNPEALTIGFSRRFATYKRANLLLQNKERLIRLVTDKERPVQFIFAG CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEC KAHPQDQAGKQIIKEIISLCRTEECRYSMVFLEDYDMDVAAHLVSGCDIWLNNPRRPLEA CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCCCEEECCCCCHHHH CGTSGMKAMLNGVLQFSTLDGWWDEAYLPDNSLGWAIGKGEEYEDLEYQDFVEIQTLYNI HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH LEKDIVPEFYDRGHGGMPRAWVGRMKNAIRQLGPRFNSHRMVEDYKATAYLPAYENYLRL HHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEECCCHHHHHHH TSDSFARARELASWRMDMMTRWGQVSIHNVRAYEHESIHVGQTVTVEAAVALNGIAPESI CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEECCCEEEEEEHHHCCCCCCCCE LVEVYAGPVGLDGSFAGRTIYPMEPAEETQDGMRMYRGKATPLEAGRFGFTVRAVPSHPL EEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCE LLDPHSLGLIRWAS EECCCCCCEEEECC >Mature Secondary Structure MHPVKVFNVTPRLPEGLEPLWDLAYNFWFAWNAGIEELFAQIDYRLWQRCAKNPVEFLNN CCCEEEEECCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHC VPQATLRELAADAIYKERLAEAHQQLQRYLGAPVDKDFHIEDERQPVVAYFSLEFGVSTC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHCHHHH LPIYSGGLGILAGDHLKSASDLNLPLIGIGLAYRQGYFRQYMTPDGWQQERYPDYDFEQM HHHHCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PLTAATAPDGTAAMVRLNIGDRPLAARIWKAQVGRVALYLLDTNIPENPPDFREVTARLY CEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHH GGGLEMRLWQEILIGIGGIKALEALGLNPKVIHMNEGHSAFAGLERVRLFMKNCGLSFEA CCCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHH ALELAASSSVFTTHTPVPAGNDRFPPDLMQRYFEPYSRDMGLAFKVFLALGRENPHDDGE HHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC PFCMTVLALRLSRFNNGVSILHGKVSRNMWKQVWNQYPVEDIPIGALTNGVHAPSWVAPD HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHH IQSLFDRYLGPNWREDPDCQRVWGQADSISDAELWRTHERLRARLVDYVRGRLIRQLTAQ HHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GARKADLQVAQEVLNPEALTIGFSRRFATYKRANLLLQNKERLIRLVTDKERPVQFIFAG CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEC KAHPQDQAGKQIIKEIISLCRTEECRYSMVFLEDYDMDVAAHLVSGCDIWLNNPRRPLEA CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCCCEEECCCCCHHHH CGTSGMKAMLNGVLQFSTLDGWWDEAYLPDNSLGWAIGKGEEYEDLEYQDFVEIQTLYNI HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH LEKDIVPEFYDRGHGGMPRAWVGRMKNAIRQLGPRFNSHRMVEDYKATAYLPAYENYLRL HHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEECCCHHHHHHH TSDSFARARELASWRMDMMTRWGQVSIHNVRAYEHESIHVGQTVTVEAAVALNGIAPESI CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEECCCEEEEEEHHHCCCCCCCCE LVEVYAGPVGLDGSFAGRTIYPMEPAEETQDGMRMYRGKATPLEAGRFGFTVRAVPSHPL EEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCE LLDPHSLGLIRWAS EECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]